FFCP PHASE1:Mm9::chr11:78137968..78137981,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11676|HGNC=|MCL_coexpression_id=42|UniProt=|association_with_transcript=140bp_to_ENSMUST00000128032_5end|description=CAGE_peak_15_at_Aldoc_5end|id=chr11:78137968..78137981,+|ontology_enrichment_celltype=CL:0002453!2.26e-11!8;CL:0002319!3.34e-11!43;CL:0000221!7.94e-11!44;CL:0000133!7.94e-11!44;CL:0000055!6.78e-09!50;CL:0000333!8.39e-09!10;CL:0000095!8.39e-09!10;CL:0000243!8.39e-09!10;CL:0000123!8.39e-09!10;CL:0000125!8.39e-09!10;CL:0000030!8.39e-09!10;CL:0000339!8.39e-09!10;CL:0000128!3.53e-08!6;CL:0000126!3.53e-08!6;CL:0000127!3.53e-08!6;CL:0000117!1.08e-07!23;CL:0000337!1.08e-07!23|ontology_enrichment_celltype_v019_2=CL:0002453,1.74e-25,8;CL:0000128,6.43e-22,6;CL:0000126,6.43e-22,6;CL:0000127,6.43e-22,6;CL:0000333,2.00e-20,10;CL:0000095,2.00e-20,10;CL:0000243,2.00e-20,10;CL:0000123,2.00e-20,10;CL:0000125,2.00e-20,10;CL:0000030,2.00e-20,10;CL:0000339,2.00e-20,10;CL:0002605,3.28e-17,2;CL:0002604,3.28e-17,2;CL:0002319,2.19e-11,43;CL:0000221,4.08e-11,44;CL:0000133,4.08e-11,44;CL:0002321,9.09e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.54e-23!73;UBERON:0005743!1.54e-23!73;UBERON:0000073!1.21e-22!75;UBERON:0001016!1.21e-22!75;UBERON:0001049!5.54e-22!52;UBERON:0005068!5.54e-22!52;UBERON:0006241!5.54e-22!52;UBERON:0007135!5.54e-22!52;UBERON:0004121!1.94e-18!102;UBERON:0000924!1.94e-18!102;UBERON:0006601!1.94e-18!102;UBERON:0002616!5.56e-17!49;UBERON:0000955!1.70e-16!50;UBERON:0006238!1.70e-16!50;UBERON:0002346!4.72e-16!71;UBERON:0003075!4.72e-16!71;UBERON:0007284!4.72e-16!71;UBERON:0003076!2.76e-15!12;UBERON:0003057!2.76e-15!12;UBERON:0000033!1.08e-13!63;UBERON:0002020!2.04e-13!34;UBERON:0003080!1.82e-10!40;UBERON:0002240!9.89e-10!6;UBERON:0005174!9.89e-10!6;UBERON:0001137!9.89e-10!6;UBERON:0002780!1.16e-09!39;UBERON:0001890!1.16e-09!39;UBERON:0006240!1.16e-09!39;UBERON:0003056!1.72e-09!49;UBERON:0002791!2.04e-08!29;UBERON:0003528!2.04e-08!29;UBERON:0001893!2.04e-08!29;UBERON:0001948!3.61e-08!5;UBERON:0002315!3.61e-08!5;UBERON:0007811!4.22e-08!86;UBERON:0000956!6.58e-08!21;UBERON:0001869!6.58e-08!21;UBERON:0000203!6.58e-08!21;UBERON:0000153!1.51e-07!94;UBERON:0004733!3.50e-07!6;UBERON:0004732!3.50e-07!6;UBERON:0002028!3.50e-07!6;UBERON:0007277!3.50e-07!6;UBERON:0000025!4.37e-07!114;UBERON:0002619!5.73e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.39e-12,73;UBERON:0001016,3.15e-12,75;UBERON:0000073,2.56e-11,54;UBERON:0004121,1.73e-09,95;UBERON:0000924,1.73e-09,95;UBERON:0006601,1.73e-09,95;UBERON:0001049,2.47e-09,52;UBERON:0005068,2.47e-09,52;UBERON:0006241,2.47e-09,52;UBERON:0007135,2.47e-09,52;UBERON:0002037,4.03e-09,4;UBERON:0002680,4.03e-09,4;UBERON:0001895,4.03e-09,4;UBERON:0010092,4.03e-09,4;UBERON:0006215,4.03e-09,4;UBERON:0002020,3.10e-08,34;UBERON:0002616,3.37e-08,46;UBERON:0000955,5.14e-08,47;UBERON:0006238,5.14e-08,47;UBERON:0002619,7.13e-08,17;UBERON:0002346,1.80e-07,64;UBERON:0003075,1.80e-07,64;UBERON:0007284,1.80e-07,64;UBERON:0003528,6.31e-07,29;UBERON:0002791,6.31e-07,29;UBERON:0001893,6.31e-07,29|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,1.75748946187577,1.55543919259427,0.55994568650145,2.87505128729943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0.599200221036809,3.07374644257244,0.414758449233911,0,0.210324961351382,0.285650984403804,1.10434270475807,0,0.0958454710182364,0,1.10115880999389,0.383062014255563,0,0,0,0,1.11673199600552,0,0.15279824777681,0.589257170947335,0.142371680799103,0.186399445825301,0,0,0,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,12.7762491156208,0,0,0,0,0.149790639404823,0,0.125654352112864,0,0.511430914660661,0.41557608911912,0.162241263067758,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0.983528546038072,0.551873492609465,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0.608929898229199,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,1.12950368523413,0,0,0.859265911718438,0,1.5107877947794,0.675022500231806,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p15@Aldoc}} | ||
|EntrezGene=11676 | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|UniProt= | |||
|association_with_transcript=140bp_to_ENSMUST00000128032_5end | |||
|description=CAGE_peak_15_at_Aldoc_5end | |||
|id=chr11:78137968..78137981,+ | |||
|ontology_enrichment_celltype=CL:0002453!2.26e-11!8;CL:0002319!3.34e-11!43;CL:0000221!7.94e-11!44;CL:0000133!7.94e-11!44;CL:0000055!6.78e-09!50;CL:0000333!8.39e-09!10;CL:0000095!8.39e-09!10;CL:0000243!8.39e-09!10;CL:0000123!8.39e-09!10;CL:0000125!8.39e-09!10;CL:0000030!8.39e-09!10;CL:0000339!8.39e-09!10;CL:0000128!3.53e-08!6;CL:0000126!3.53e-08!6;CL:0000127!3.53e-08!6;CL:0000117!1.08e-07!23;CL:0000337!1.08e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.74e-25,8;CL:0000128,6.43e-22,6;CL:0000126,6.43e-22,6;CL:0000127,6.43e-22,6;CL:0000333,2.00e-20,10;CL:0000095,2.00e-20,10;CL:0000243,2.00e-20,10;CL:0000123,2.00e-20,10;CL:0000125,2.00e-20,10;CL:0000030,2.00e-20,10;CL:0000339,2.00e-20,10;CL:0002605,3.28e-17,2;CL:0002604,3.28e-17,2;CL:0002319,2.19e-11,43;CL:0000221,4.08e-11,44;CL:0000133,4.08e-11,44;CL:0002321,9.09e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.54e-23!73;UBERON:0005743!1.54e-23!73;UBERON:0000073!1.21e-22!75;UBERON:0001016!1.21e-22!75;UBERON:0001049!5.54e-22!52;UBERON:0005068!5.54e-22!52;UBERON:0006241!5.54e-22!52;UBERON:0007135!5.54e-22!52;UBERON:0004121!1.94e-18!102;UBERON:0000924!1.94e-18!102;UBERON:0006601!1.94e-18!102;UBERON:0002616!5.56e-17!49;UBERON:0000955!1.70e-16!50;UBERON:0006238!1.70e-16!50;UBERON:0002346!4.72e-16!71;UBERON:0003075!4.72e-16!71;UBERON:0007284!4.72e-16!71;UBERON:0003076!2.76e-15!12;UBERON:0003057!2.76e-15!12;UBERON:0000033!1.08e-13!63;UBERON:0002020!2.04e-13!34;UBERON:0003080!1.82e-10!40;UBERON:0002240!9.89e-10!6;UBERON:0005174!9.89e-10!6;UBERON:0001137!9.89e-10!6;UBERON:0002780!1.16e-09!39;UBERON:0001890!1.16e-09!39;UBERON:0006240!1.16e-09!39;UBERON:0003056!1.72e-09!49;UBERON:0002791!2.04e-08!29;UBERON:0003528!2.04e-08!29;UBERON:0001893!2.04e-08!29;UBERON:0001948!3.61e-08!5;UBERON:0002315!3.61e-08!5;UBERON:0007811!4.22e-08!86;UBERON:0000956!6.58e-08!21;UBERON:0001869!6.58e-08!21;UBERON:0000203!6.58e-08!21;UBERON:0000153!1.51e-07!94;UBERON:0004733!3.50e-07!6;UBERON:0004732!3.50e-07!6;UBERON:0002028!3.50e-07!6;UBERON:0007277!3.50e-07!6;UBERON:0000025!4.37e-07!114;UBERON:0002619!5.73e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.39e-12,73;UBERON:0001016,3.15e-12,75;UBERON:0000073,2.56e-11,54;UBERON:0004121,1.73e-09,95;UBERON:0000924,1.73e-09,95;UBERON:0006601,1.73e-09,95;UBERON:0001049,2.47e-09,52;UBERON:0005068,2.47e-09,52;UBERON:0006241,2.47e-09,52;UBERON:0007135,2.47e-09,52;UBERON:0002037,4.03e-09,4;UBERON:0002680,4.03e-09,4;UBERON:0001895,4.03e-09,4;UBERON:0010092,4.03e-09,4;UBERON:0006215,4.03e-09,4;UBERON:0002020,3.10e-08,34;UBERON:0002616,3.37e-08,46;UBERON:0000955,5.14e-08,47;UBERON:0006238,5.14e-08,47;UBERON:0002619,7.13e-08,17;UBERON:0002346,1.80e-07,64;UBERON:0003075,1.80e-07,64;UBERON:0007284,1.80e-07,64;UBERON:0003528,6.31e-07,29;UBERON:0002791,6.31e-07,29;UBERON:0001893,6.31e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,1.75748946187577,1.55543919259427,0.55994568650145,2.87505128729943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0.599200221036809,3.07374644257244,0.414758449233911,0,0.210324961351382,0.285650984403804,1.10434270475807,0,0.0958454710182364,0,1.10115880999389,0.383062014255563,0,0,0,0,1.11673199600552,0,0.15279824777681,0.589257170947335,0.142371680799103,0.186399445825301,0,0,0,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,12.7762491156208,0,0,0,0,0.149790639404823,0,0.125654352112864,0,0.511430914660661,0.41557608911912,0.162241263067758,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0.983528546038072,0.551873492609465,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0.608929898229199,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,1.12950368523413,0,0,0.859265911718438,0,1.5107877947794,0.675022500231806,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p15@Aldoc | |||
}} |
Revision as of 21:02, 12 September 2013
Short description: | p15@Aldoc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_Aldoc_5end |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | 140bp_to_ENSMUST00000128032_5end |
EntrezGene: | Aldoc |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.74e-25 | 8 |
oligodendrocyte | 6.43e-22 | 6 |
macroglial cell | 6.43e-22 | 6 |
astrocyte | 6.43e-22 | 6 |
migratory neural crest cell | 2.00e-20 | 10 |
neuron associated cell | 2.00e-20 | 10 |
glial cell (sensu Vertebrata) | 2.00e-20 | 10 |
neuron associated cell (sensu Vertebrata) | 2.00e-20 | 10 |
glial cell | 2.00e-20 | 10 |
glioblast | 2.00e-20 | 10 |
glioblast (sensu Vertebrata) | 2.00e-20 | 10 |
astrocyte of the cerebral cortex | 3.28e-17 | 2 |
astrocyte of the hippocampus | 3.28e-17 | 2 |
neural cell | 2.19e-11 | 43 |
ectodermal cell | 4.08e-11 | 44 |
neurectodermal cell | 4.08e-11 | 44 |
embryonic cell | 9.09e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.39e-12 | 73 |
nervous system | 3.15e-12 | 75 |
regional part of nervous system | 2.56e-11 | 54 |
ectoderm-derived structure | 1.73e-09 | 95 |
ectoderm | 1.73e-09 | 95 |
presumptive ectoderm | 1.73e-09 | 95 |
neural tube | 2.47e-09 | 52 |
neural rod | 2.47e-09 | 52 |
future spinal cord | 2.47e-09 | 52 |
neural keel | 2.47e-09 | 52 |
cerebellum | 4.03e-09 | 4 |
regional part of metencephalon | 4.03e-09 | 4 |
metencephalon | 4.03e-09 | 4 |
future metencephalon | 4.03e-09 | 4 |
rhombic lip | 4.03e-09 | 4 |
gray matter | 3.10e-08 | 34 |
regional part of brain | 3.37e-08 | 46 |
brain | 5.14e-08 | 47 |
future brain | 5.14e-08 | 47 |
regional part of cerebral cortex | 7.13e-08 | 17 |
neurectoderm | 1.80e-07 | 64 |
neural plate | 1.80e-07 | 64 |
presumptive neural plate | 1.80e-07 | 64 |
brain grey matter | 6.31e-07 | 29 |
regional part of telencephalon | 6.31e-07 | 29 |
telencephalon | 6.31e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.