FFCP PHASE1:Hg19::chr3:123752240..123752247,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8997|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=4814|TSSclassifier=S|UniProt=|association_with_transcript=-294bp_to_uc003ehd.2_5end|coexpression_cluster_id=C4276|description=CAGE_peak_15_at_KALRN_5end|id=chr3:123752240..123752247,+|ontology_enrichment_celltype=CL:0002139!9.16e-08!24;CL:0002319!1.74e-07!25;CL:0000115!8.55e-07!35|ontology_enrichment_celltype_v019=CL:0000047;2.85e-19;2!CL:0000540;3.51e-14;6!CL:0000404;3.51e-14;6!CL:0002144;3.56e-13;3!CL:0002319;1.15e-11;25!CL:0002553;2.62e-10;1|ontology_enrichment_celltype_v019_2=CL:0000047,4.93e-28,8;CL:0000540,4.12e-14,6;CL:0000031,4.12e-14,6;CL:0000404,4.12e-14,6;CL:0002144,4.03e-13,3;CL:0002319,1.48e-11,25;CL:0002553,1.73e-10,1|ontology_enrichment_development_v019=CL:0000031;3.51e-14;6!UBERON:0005754;2.62e-10;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.59e-28!82;UBERON:0000073!4.20e-28!94;UBERON:0001016!4.20e-28!94;UBERON:0005743!1.18e-27!86;UBERON:0001049!4.58e-26!57;UBERON:0005068!4.58e-26!57;UBERON:0006241!4.58e-26!57;UBERON:0007135!4.58e-26!57;UBERON:0002780!1.89e-25!41;UBERON:0001890!1.89e-25!41;UBERON:0006240!1.89e-25!41;UBERON:0001869!6.37e-25!32;UBERON:0001893!9.32e-25!34;UBERON:0003080!1.43e-24!42;UBERON:0002020!3.33e-24!34;UBERON:0003528!3.33e-24!34;UBERON:0007023!7.09e-24!115;UBERON:0002791!1.33e-23!33;UBERON:0003075!4.61e-22!86;UBERON:0007284!4.61e-22!86;UBERON:0002616!4.86e-22!59;UBERON:0000955!1.25e-21!69;UBERON:0006238!1.25e-21!69;UBERON:0002346!1.66e-21!90;UBERON:0000956!4.14e-20!25;UBERON:0000203!4.14e-20!25;UBERON:0003056!4.77e-19!61;UBERON:0002619!1.60e-17!22;UBERON:0004111!1.54e-15!241;UBERON:0001950!1.64e-15!20;UBERON:0000025!1.67e-15!194;UBERON:0004121!1.80e-15!169;UBERON:0000924!2.20e-15!173;UBERON:0006601!2.20e-15!173;UBERON:0000477!7.22e-14!286;UBERON:0000033!1.87e-11!123;UBERON:0000153!2.09e-11!129;UBERON:0007811!2.09e-11!129;UBERON:0000483!5.02e-10!309;UBERON:0000119!1.06e-09!312;UBERON:0000468!1.67e-09!659;UBERON:0000467!1.26e-08!625;UBERON:0000480!1.51e-08!626;UBERON:0000200!2.29e-08!6|ontology_enrichment_uberon_v019=UBERON:0010523;3.56e-13;3!UBERON:0001915;3.56e-13;3!UBERON:0001982;3.56e-13;3!UBERON:0001950;6.57e-11;20!UBERON:0002902;2.62e-10;1!UBERON:0000998;2.62e-10;1!UBERON:0002146;2.62e-10;1!UBERON:0006868;2.62e-10;1!UBERON:0005623;2.62e-10;1!UBERON:0009899;2.62e-10;1!UBERON:0007190;2.62e-10;1!UBERON:0002619;6.02e-10;22!UBERON:0000956;8.85e-09;25!UBERON:0000203;8.85e-09;25!UBERON:0001869;1.57e-08;32!UBERON:0002021;2.49e-08;5!UBERON:0001893;1.21e-07;34!UBERON:0000200;6.88e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0010523,4.03e-13,3;UBERON:0001915,4.03e-13,3;UBERON:0001982,4.03e-13,3;UBERON:0001016,2.62e-12,89;UBERON:0001017,1.48e-11,81;UBERON:0001950,5.21e-11,20;UBERON:0000998,1.57e-10,1;UBERON:0006868,1.57e-10,1;UBERON:0002902,1.89e-10,1;UBERON:0009899,1.89e-10,1;UBERON:0002146,2.50e-10,1;UBERON:0005623,2.50e-10,1;UBERON:0007190,4.75e-10,1;UBERON:0002619,4.88e-10,22;UBERON:0001869,1.22e-09,32;UBERON:0001893,4.62e-09,34;UBERON:0000956,7.37e-09,25;UBERON:0000203,7.37e-09,25;UBERON:0002021,2.19e-08,5;UBERON:0004121,6.98e-08,171;UBERON:0000924,6.98e-08,171;UBERON:0006601,6.98e-08,171;UBERON:0002780,1.80e-07,41;UBERON:0001890,1.80e-07,41;UBERON:0003080,1.80e-07,41;UBERON:0006240,1.80e-07,41;UBERON:0002791,6.14e-07,32;UBERON:0000200,6.88e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0.331397375727916,0,0,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0.572471974262113,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0.567208902984407,0,0.175669571386252,0.327447688744282,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0,0.71153252537342,0.33472061276467,0.402829317109147,3.04108842287405,1.22031028774085,0.367663080345869,0,0,0.673588117878509,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0.0974370051611986,0.252433774244115,0,0,0,0.403008392910561,0.169560592310488,0,0,0,0,0.132529768321485,0.232387885739037,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0,0,0,0,0,0,0,0.288732895522148,0,0.951270761172991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,3.90419561572865,2.31986643833309,1.17261385734044,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12085944959162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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8997 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4814 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-294bp_to_uc003ehd.2_5end | |||
|coexpression_cluster_id=C4276 | |||
|description=CAGE_peak_15_at_KALRN_5end | |||
|id=chr3:123752240..123752247,+ | |||
|ontology_enrichment_celltype=CL:0002139!9.16e-08!24;CL:0002319!1.74e-07!25;CL:0000115!8.55e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.85e-19;2!CL:0000540;3.51e-14;6!CL:0000404;3.51e-14;6!CL:0002144;3.56e-13;3!CL:0002319;1.15e-11;25!CL:0002553;2.62e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.93e-28,8;CL:0000540,4.12e-14,6;CL:0000031,4.12e-14,6;CL:0000404,4.12e-14,6;CL:0002144,4.03e-13,3;CL:0002319,1.48e-11,25;CL:0002553,1.73e-10,1 | |||
|ontology_enrichment_development_v019=CL:0000031;3.51e-14;6!UBERON:0005754;2.62e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.59e-28!82;UBERON:0000073!4.20e-28!94;UBERON:0001016!4.20e-28!94;UBERON:0005743!1.18e-27!86;UBERON:0001049!4.58e-26!57;UBERON:0005068!4.58e-26!57;UBERON:0006241!4.58e-26!57;UBERON:0007135!4.58e-26!57;UBERON:0002780!1.89e-25!41;UBERON:0001890!1.89e-25!41;UBERON:0006240!1.89e-25!41;UBERON:0001869!6.37e-25!32;UBERON:0001893!9.32e-25!34;UBERON:0003080!1.43e-24!42;UBERON:0002020!3.33e-24!34;UBERON:0003528!3.33e-24!34;UBERON:0007023!7.09e-24!115;UBERON:0002791!1.33e-23!33;UBERON:0003075!4.61e-22!86;UBERON:0007284!4.61e-22!86;UBERON:0002616!4.86e-22!59;UBERON:0000955!1.25e-21!69;UBERON:0006238!1.25e-21!69;UBERON:0002346!1.66e-21!90;UBERON:0000956!4.14e-20!25;UBERON:0000203!4.14e-20!25;UBERON:0003056!4.77e-19!61;UBERON:0002619!1.60e-17!22;UBERON:0004111!1.54e-15!241;UBERON:0001950!1.64e-15!20;UBERON:0000025!1.67e-15!194;UBERON:0004121!1.80e-15!169;UBERON:0000924!2.20e-15!173;UBERON:0006601!2.20e-15!173;UBERON:0000477!7.22e-14!286;UBERON:0000033!1.87e-11!123;UBERON:0000153!2.09e-11!129;UBERON:0007811!2.09e-11!129;UBERON:0000483!5.02e-10!309;UBERON:0000119!1.06e-09!312;UBERON:0000468!1.67e-09!659;UBERON:0000467!1.26e-08!625;UBERON:0000480!1.51e-08!626;UBERON:0000200!2.29e-08!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;3.56e-13;3!UBERON:0001915;3.56e-13;3!UBERON:0001982;3.56e-13;3!UBERON:0001950;6.57e-11;20!UBERON:0002902;2.62e-10;1!UBERON:0000998;2.62e-10;1!UBERON:0002146;2.62e-10;1!UBERON:0006868;2.62e-10;1!UBERON:0005623;2.62e-10;1!UBERON:0009899;2.62e-10;1!UBERON:0007190;2.62e-10;1!UBERON:0002619;6.02e-10;22!UBERON:0000956;8.85e-09;25!UBERON:0000203;8.85e-09;25!UBERON:0001869;1.57e-08;32!UBERON:0002021;2.49e-08;5!UBERON:0001893;1.21e-07;34!UBERON:0000200;6.88e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,4.03e-13,3;UBERON:0001915,4.03e-13,3;UBERON:0001982,4.03e-13,3;UBERON:0001016,2.62e-12,89;UBERON:0001017,1.48e-11,81;UBERON:0001950,5.21e-11,20;UBERON:0000998,1.57e-10,1;UBERON:0006868,1.57e-10,1;UBERON:0002902,1.89e-10,1;UBERON:0009899,1.89e-10,1;UBERON:0002146,2.50e-10,1;UBERON:0005623,2.50e-10,1;UBERON:0007190,4.75e-10,1;UBERON:0002619,4.88e-10,22;UBERON:0001869,1.22e-09,32;UBERON:0001893,4.62e-09,34;UBERON:0000956,7.37e-09,25;UBERON:0000203,7.37e-09,25;UBERON:0002021,2.19e-08,5;UBERON:0004121,6.98e-08,171;UBERON:0000924,6.98e-08,171;UBERON:0006601,6.98e-08,171;UBERON:0002780,1.80e-07,41;UBERON:0001890,1.80e-07,41;UBERON:0003080,1.80e-07,41;UBERON:0006240,1.80e-07,41;UBERON:0002791,6.14e-07,32;UBERON:0000200,6.88e-07,6 | |||
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|short_description=p15@KALRN | |||
}} |
Revision as of 21:14, 12 September 2013
Short description: | p15@KALRN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_KALRN_5end |
Coexpression cluster: | C4276_duodenum_occipital_parietal_aorta_temporal_heart_Neural |
Association with transcript: | -294bp_to_uc003ehd.2_5end |
EntrezGene: | KALRN |
HGNC: | 4814 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.93e-28 | 8 |
neuron | 4.12e-14 | 6 |
neuroblast | 4.12e-14 | 6 |
electrically signaling cell | 4.12e-14 | 6 |
capillary endothelial cell | 4.03e-13 | 3 |
neural cell | 1.48e-11 | 25 |
lung fibroblast | 1.73e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 4.03e-13 | 3 |
endothelium of capillary | 4.03e-13 | 3 |
capillary | 4.03e-13 | 3 |
nervous system | 2.62e-12 | 89 |
central nervous system | 1.48e-11 | 81 |
neocortex | 5.21e-11 | 20 |
seminal vesicle | 1.57e-10 | 1 |
seminal fluid secreting gland | 1.57e-10 | 1 |
occipital pole | 1.89e-10 | 1 |
pole of cerebral hemisphere | 1.89e-10 | 1 |
pulmonary valve | 2.50e-10 | 1 |
semi-lunar valve | 2.50e-10 | 1 |
paracentral gyrus | 4.75e-10 | 1 |
regional part of cerebral cortex | 4.88e-10 | 22 |
cerebral hemisphere | 1.22e-09 | 32 |
telencephalon | 4.62e-09 | 34 |
cerebral cortex | 7.37e-09 | 25 |
pallium | 7.37e-09 | 25 |
occipital lobe | 2.19e-08 | 5 |
ectoderm-derived structure | 6.98e-08 | 171 |
ectoderm | 6.98e-08 | 171 |
presumptive ectoderm | 6.98e-08 | 171 |
regional part of forebrain | 1.80e-07 | 41 |
forebrain | 1.80e-07 | 41 |
anterior neural tube | 1.80e-07 | 41 |
future forebrain | 1.80e-07 | 41 |
regional part of telencephalon | 6.14e-07 | 32 |
gyrus | 6.88e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.