Personal tools

FFCP PHASE1:Mm9::chr11:90250894..90250916,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=217082|HGNC=|MCL_coexpression_id=1593|UniProt=B1AVK9|association_with_transcript=0bp_to_ENSMUST00000145786_5end|description=CAGE_peak_5_at_Hlf_5end|id=chr11:90250894..90250916,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.79e-21!63;UBERON:0000955!9.29e-19!50;UBERON:0006238!9.29e-19!50;UBERON:0002616!5.15e-18!49;UBERON:0003056!3.02e-16!49;UBERON:0002346!6.00e-16!71;UBERON:0003075!6.00e-16!71;UBERON:0007284!6.00e-16!71;UBERON:0004121!1.04e-15!102;UBERON:0000924!1.04e-15!102;UBERON:0006601!1.04e-15!102;UBERON:0001049!1.32e-15!52;UBERON:0005068!1.32e-15!52;UBERON:0006241!1.32e-15!52;UBERON:0007135!1.32e-15!52;UBERON:0004111!2.24e-14!122;UBERON:0000025!1.48e-13!114;UBERON:0003080!1.79e-13!40;UBERON:0002780!8.31e-13!39;UBERON:0001890!8.31e-13!39;UBERON:0006240!8.31e-13!39;UBERON:0001017!1.42e-12!73;UBERON:0005743!1.42e-12!73;UBERON:0000073!3.13e-12!75;UBERON:0001016!3.13e-12!75;UBERON:0007811!2.93e-10!86;UBERON:0002021!6.47e-09!10;UBERON:0000411!6.47e-09!10;UBERON:0001950!6.47e-09!10;UBERON:0000153!2.06e-08!94;UBERON:0002791!9.82e-08!29;UBERON:0003528!9.82e-08!29;UBERON:0001893!9.82e-08!29;UBERON:0002020!2.89e-07!34;UBERON:0000119!3.17e-07!183;UBERON:0000483!4.14e-07!181;UBERON:0000477!7.84e-07!154;UBERON:0007023!8.63e-07!51;UBERON:0001894!9.58e-07!10;UBERON:0006222!9.58e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000955,1.14e-23,47;UBERON:0006238,1.14e-23,47;UBERON:0000073,3.83e-23,54;UBERON:0002616,2.14e-22,46;UBERON:0001049,2.10e-20,52;UBERON:0005068,2.10e-20,52;UBERON:0006241,2.10e-20,52;UBERON:0007135,2.10e-20,52;UBERON:0001017,1.03e-19,73;UBERON:0003080,2.99e-19,40;UBERON:0001016,6.33e-19,75;UBERON:0010371,1.89e-18,73;UBERON:0002780,4.58e-18,39;UBERON:0001890,4.58e-18,39;UBERON:0006240,4.58e-18,39;UBERON:0004121,1.23e-17,95;UBERON:0000924,1.23e-17,95;UBERON:0006601,1.23e-17,95;UBERON:0002346,1.24e-17,64;UBERON:0003075,1.24e-17,64;UBERON:0007284,1.24e-17,64;UBERON:0003056,2.65e-17,49;UBERON:0002021,9.72e-16,10;UBERON:0000411,9.72e-16,10;UBERON:0001950,9.72e-16,10;UBERON:0010314,2.97e-11,92;UBERON:0003528,3.30e-11,29;UBERON:0002791,3.30e-11,29;UBERON:0001893,3.30e-11,29;UBERON:0002619,4.92e-10,17;UBERON:0007023,7.90e-10,51;UBERON:0004111,1.18e-09,122;UBERON:0000025,1.49e-09,114;UBERON:0000956,2.46e-09,21;UBERON:0001869,2.46e-09,21;UBERON:0000203,2.46e-09,21;UBERON:0002020,6.29e-09,34;UBERON:0001894,2.50e-08,10;UBERON:0006222,2.50e-08,10|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.47673941043627,0,0,0,0.699932108126813,0,0,0,0,0,0,0,0,0,0,0.677689064138264,0,0,0,0,0,1.15265491596466,0.103689612308478,0,0,0.285650984403804,0.220868540951614,0.122490799214954,0.0958454710182364,0,3.30347642998166,7.78892762319645,6.45147439676223,0.131886287730194,0.640413505216868,0,1.67509799400829,3.37657566019008,2.59757021220577,0,0.142371680799103,0,0.075726193333184,0,1.44932244350839,0,0,0,0,0.448026887097336,2.38755514223978,0,0,0,0,0,0,0,0,0,0,2.51204535381932,0.258937883647172,1.03909497345377,0.173485326766136,0,0,0,0.117588707135705,0.125666591329675,0,5.49477556295664,0,0.161766849947409,0,0,1.86391761218122,2.04946557908083,0.628340120440365,0.510914110417183,0,0,0,3.44518470631092,10.0650132620098,0,8.69121600961382,7.16003280524926,7.06479351502504,4.70499662896497,0.101839363850316,0,1.0108910337347,2.10441855886474,0.260240885925407,0.229902104433473,0.180062129805349,0.150704817835715,0.476255494059295,0.384341160854549,0.187403449119458,3.3631438196072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0.462801338662135,0.232533944750408,0,0.583826711835847,0.493679549740441,0.492502392237286,0.729619285912702,0.584799949701329,0.219550115291051,0,3.36463917702604,0.205809224758569,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0.379419222745544,6.05201606716369,3.767969468193,1.97435462274881,1.77871576252289,0.166845105716094,0.196558995113203,0.449724224769707,0,0,0.25462585178142,0,0,0,1.43768206527355,0.372140947668503,0,0.505157755894224,0,0,3.51031061316549,0,0,0,0,0,0.476087281772027,0,0.472905432318573,0.8858587585951,0.637819074629948,1.3109065177259,0.172684981865896,0.578596234326046,0,0,20.1623351937805,12.417153583713,2.72936002979246,1.87538698547525,0,0.252470927204373,0,0,0,0,0,0,0,0,0,4.4984984299053,0,0,0.162886959353576,0.989820737835213,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,1.16422815404479,1.71469628025274,2.12808280370728,2.14042581122485,1.81003922662333,2.43571959291679,0,0,0,0.49465875882444,0.161464426695906,0.0603129249281559,0.238744688006273,0,0.291480836629851,2.22510362412612,0,0,0,0,0,0,2.37969801991397,3.63873776041511,2.9021994498929,0,0,0,0,0,0,0,0.41326727862668,0,0,0,0,0,0,0,0,0,0,0,0.314578033277133,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.386379188064381,0.187682475451182,0,0.214368379079066,1.00314420807073,2.82375921308533,1.84130094602871,4.58316410751517,3.09335728218638,6.16574267793578,4.5323633843382,5.40018000185445,7.20513925158753,5.89085131679466,7.24864436452548,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0,0.229741875822453,0.952587382566147,0.115884325944855,0.578727661391115,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0,0,0,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0,0.231867835620421|short_description=p5@Hlf}}
|EntrezGene=217082
|HGNC=
|MCL_coexpression_id=1593
|UniProt=B1AVK9
|association_with_transcript=0bp_to_ENSMUST00000145786_5end
|description=CAGE_peak_5_at_Hlf_5end
|id=chr11:90250894..90250916,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!2.79e-21!63;UBERON:0000955!9.29e-19!50;UBERON:0006238!9.29e-19!50;UBERON:0002616!5.15e-18!49;UBERON:0003056!3.02e-16!49;UBERON:0002346!6.00e-16!71;UBERON:0003075!6.00e-16!71;UBERON:0007284!6.00e-16!71;UBERON:0004121!1.04e-15!102;UBERON:0000924!1.04e-15!102;UBERON:0006601!1.04e-15!102;UBERON:0001049!1.32e-15!52;UBERON:0005068!1.32e-15!52;UBERON:0006241!1.32e-15!52;UBERON:0007135!1.32e-15!52;UBERON:0004111!2.24e-14!122;UBERON:0000025!1.48e-13!114;UBERON:0003080!1.79e-13!40;UBERON:0002780!8.31e-13!39;UBERON:0001890!8.31e-13!39;UBERON:0006240!8.31e-13!39;UBERON:0001017!1.42e-12!73;UBERON:0005743!1.42e-12!73;UBERON:0000073!3.13e-12!75;UBERON:0001016!3.13e-12!75;UBERON:0007811!2.93e-10!86;UBERON:0002021!6.47e-09!10;UBERON:0000411!6.47e-09!10;UBERON:0001950!6.47e-09!10;UBERON:0000153!2.06e-08!94;UBERON:0002791!9.82e-08!29;UBERON:0003528!9.82e-08!29;UBERON:0001893!9.82e-08!29;UBERON:0002020!2.89e-07!34;UBERON:0000119!3.17e-07!183;UBERON:0000483!4.14e-07!181;UBERON:0000477!7.84e-07!154;UBERON:0007023!8.63e-07!51;UBERON:0001894!9.58e-07!10;UBERON:0006222!9.58e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000955,1.14e-23,47;UBERON:0006238,1.14e-23,47;UBERON:0000073,3.83e-23,54;UBERON:0002616,2.14e-22,46;UBERON:0001049,2.10e-20,52;UBERON:0005068,2.10e-20,52;UBERON:0006241,2.10e-20,52;UBERON:0007135,2.10e-20,52;UBERON:0001017,1.03e-19,73;UBERON:0003080,2.99e-19,40;UBERON:0001016,6.33e-19,75;UBERON:0010371,1.89e-18,73;UBERON:0002780,4.58e-18,39;UBERON:0001890,4.58e-18,39;UBERON:0006240,4.58e-18,39;UBERON:0004121,1.23e-17,95;UBERON:0000924,1.23e-17,95;UBERON:0006601,1.23e-17,95;UBERON:0002346,1.24e-17,64;UBERON:0003075,1.24e-17,64;UBERON:0007284,1.24e-17,64;UBERON:0003056,2.65e-17,49;UBERON:0002021,9.72e-16,10;UBERON:0000411,9.72e-16,10;UBERON:0001950,9.72e-16,10;UBERON:0010314,2.97e-11,92;UBERON:0003528,3.30e-11,29;UBERON:0002791,3.30e-11,29;UBERON:0001893,3.30e-11,29;UBERON:0002619,4.92e-10,17;UBERON:0007023,7.90e-10,51;UBERON:0004111,1.18e-09,122;UBERON:0000025,1.49e-09,114;UBERON:0000956,2.46e-09,21;UBERON:0001869,2.46e-09,21;UBERON:0000203,2.46e-09,21;UBERON:0002020,6.29e-09,34;UBERON:0001894,2.50e-08,10;UBERON:0006222,2.50e-08,10
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.47673941043627,0,0,0,0.699932108126813,0,0,0,0,0,0,0,0,0,0,0.677689064138264,0,0,0,0,0,1.15265491596466,0.103689612308478,0,0,0.285650984403804,0.220868540951614,0.122490799214954,0.0958454710182364,0,3.30347642998166,7.78892762319645,6.45147439676223,0.131886287730194,0.640413505216868,0,1.67509799400829,3.37657566019008,2.59757021220577,0,0.142371680799103,0,0.075726193333184,0,1.44932244350839,0,0,0,0,0.448026887097336,2.38755514223978,0,0,0,0,0,0,0,0,0,0,2.51204535381932,0.258937883647172,1.03909497345377,0.173485326766136,0,0,0,0.117588707135705,0.125666591329675,0,5.49477556295664,0,0.161766849947409,0,0,1.86391761218122,2.04946557908083,0.628340120440365,0.510914110417183,0,0,0,3.44518470631092,10.0650132620098,0,8.69121600961382,7.16003280524926,7.06479351502504,4.70499662896497,0.101839363850316,0,1.0108910337347,2.10441855886474,0.260240885925407,0.229902104433473,0.180062129805349,0.150704817835715,0.476255494059295,0.384341160854549,0.187403449119458,3.3631438196072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0.462801338662135,0.232533944750408,0,0.583826711835847,0.493679549740441,0.492502392237286,0.729619285912702,0.584799949701329,0.219550115291051,0,3.36463917702604,0.205809224758569,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0.379419222745544,6.05201606716369,3.767969468193,1.97435462274881,1.77871576252289,0.166845105716094,0.196558995113203,0.449724224769707,0,0,0.25462585178142,0,0,0,1.43768206527355,0.372140947668503,0,0.505157755894224,0,0,3.51031061316549,0,0,0,0,0,0.476087281772027,0,0.472905432318573,0.8858587585951,0.637819074629948,1.3109065177259,0.172684981865896,0.578596234326046,0,0,20.1623351937805,12.417153583713,2.72936002979246,1.87538698547525,0,0.252470927204373,0,0,0,0,0,0,0,0,0,4.4984984299053,0,0,0.162886959353576,0.989820737835213,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.36012218806262,1.16422815404479,1.71469628025274,2.12808280370728,2.14042581122485,1.81003922662333,2.43571959291679,0,0,0,0.49465875882444,0.161464426695906,0.0603129249281559,0.238744688006273,0,0.291480836629851,2.22510362412612,0,0,0,0,0,0,2.37969801991397,3.63873776041511,2.9021994498929,0,0,0,0,0,0,0,0.41326727862668,0,0,0,0,0,0,0,0,0,0,0,0.314578033277133,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.386379188064381,0.187682475451182,0,0.214368379079066,1.00314420807073,2.82375921308533,1.84130094602871,4.58316410751517,3.09335728218638,6.16574267793578,4.5323633843382,5.40018000185445,7.20513925158753,5.89085131679466,7.24864436452548,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0,0.229741875822453,0.952587382566147,0.115884325944855,0.578727661391115,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0,0,0,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0,0.231867835620421
|short_description=p5@Hlf
}}

Revision as of 21:27, 12 September 2013

Short description:p5@Hlf
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Hlf_5end
Coexpression cluster:MCL_coexpression_mm9:1593
Association with transcript: 0bp_to_ENSMUST00000145786_5end
EntrezGene:Hlf
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Hlf

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.51
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H15.49
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.45
corpus striatum, adult.CNhs10487.19-21D810.07
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D58.69
cortex, neonate N30.CNhs11107.1392-42F27.16
diencephalon, adult.CNhs10482.20-12F27.06
diencephalon, neonate N30.CNhs11201.1388-42B24.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I16.05
kidney, neonate N25.CNhs11122.1353-25F33.77
kidney, neonate N30.CNhs11203.1385-42H11.97
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B13.51
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B620.16
mammary gland, adult pregnant day19.CNhs10476.588-5H212.42
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.64
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.90
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
brain1.14e-2347
future brain1.14e-2347
regional part of nervous system3.83e-2354
regional part of brain2.14e-2246
neural tube2.10e-2052
neural rod2.10e-2052
future spinal cord2.10e-2052
neural keel2.10e-2052
central nervous system1.03e-1973
anterior neural tube2.99e-1940
nervous system6.33e-1975
ecto-epithelium1.89e-1873
regional part of forebrain4.58e-1839
forebrain4.58e-1839
future forebrain4.58e-1839
ectoderm-derived structure1.23e-1795
ectoderm1.23e-1795
presumptive ectoderm1.23e-1795
neurectoderm1.24e-1764
neural plate1.24e-1764
presumptive neural plate1.24e-1764
pre-chordal neural plate2.65e-1749
occipital lobe9.72e-1610
visual cortex9.72e-1610
neocortex9.72e-1610
structure with developmental contribution from neural crest2.97e-1192
brain grey matter3.30e-1129
regional part of telencephalon3.30e-1129
telencephalon3.30e-1129
regional part of cerebral cortex4.92e-1017
adult organism7.90e-1051
anatomical conduit1.18e-09122
tube1.49e-09114
cerebral cortex2.46e-0921
cerebral hemisphere2.46e-0921
pallium2.46e-0921
gray matter6.29e-0934
diencephalon2.50e-0810
future diencephalon2.50e-0810







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:90250894..90250916,-&oldid=2897521"