FFCP PHASE1:Mm9::chr11:90665996..90666013,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=46|UniProt=|association_with_transcript=0bp_to_ENSMUST00000142521,uc007kxd.1_5end|description=CAGE_peak_1_at_ENSMUST00000142521_5end,CAGE_peak_1_at_uc007kxd.1_5end|id=chr11:90665996..90666013,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,1.86e-15,1;CL:0002078,1.86e-15,1;CL:0000115,1.86e-15,1;CL:0002262,1.86e-15,1;CL:1000398,1.86e-15,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.18e-44,3;UBERON:0000478,1.18e-44,3;UBERON:0000158,1.18e-44,3;UBERON:0001987,3.41e-30,2;UBERON:0003124,3.41e-30,2;UBERON:0004340,3.41e-30,2;UBERON:0000305,3.44e-16,1;UBERON:0005795,1.13e-15,4;UBERON:0000995,1.13e-15,4;UBERON:0002394,1.86e-15,1;UBERON:0001281,1.86e-15,1;UBERON:0000353,1.86e-15,1;UBERON:0003497,1.86e-15,1;UBERON:0003909,1.86e-15,1;UBERON:0003928,1.86e-15,1;UBERON:0003835,1.86e-15,1;UBERON:0003513,1.86e-15,1;UBERON:0001280,1.86e-15,1;UBERON:0004647,1.86e-15,1;UBERON:0002294,1.86e-15,1;UBERON:0001173,1.86e-15,1;UBERON:0004912,1.86e-15,1;UBERON:0005171,1.86e-15,1;UBERON:0006554,1.72e-13,18;UBERON:0001008,8.22e-13,19;UBERON:0003975,9.46e-13,5;UBERON:0003134,2.44e-08,8;UBERON:0004175,1.63e-07,9;UBERON:0000474,1.63e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0.589257170947335,0.142371680799103,0,0,0,1.15945795480671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0.150722640552623,0.23517741427141,0,117.170414706093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0.756424320671277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0.760902504450237,0,0.494096864172033,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,1.55161989734101,1.26244475802573,0,0.295220295959204,0,0,0,0,0,0,0,0,0,0.575392274901621,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0,0.428674070063185,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,4.22409074514679,4.87213762986786,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0.44449345560323,0,0,0,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0.294397840268795,0.342869252385415,0,0,0.290692833264657,0.376437521661322,0.338458431566706,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.197008964751127,0,0,0,0,0.701794825336225,0.214871054048298,0,0,0|short_description=p1@ENSMUST00000142521,p1@uc007kxd.1}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=46 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000142521,uc007kxd.1_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000142521_5end,CAGE_peak_1_at_uc007kxd.1_5end | |||
|id=chr11:90665996..90666013,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,1.86e-15,1;CL:0002078,1.86e-15,1;CL:0000115,1.86e-15,1;CL:0002262,1.86e-15,1;CL:1000398,1.86e-15,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.18e-44,3;UBERON:0000478,1.18e-44,3;UBERON:0000158,1.18e-44,3;UBERON:0001987,3.41e-30,2;UBERON:0003124,3.41e-30,2;UBERON:0004340,3.41e-30,2;UBERON:0000305,3.44e-16,1;UBERON:0005795,1.13e-15,4;UBERON:0000995,1.13e-15,4;UBERON:0002394,1.86e-15,1;UBERON:0001281,1.86e-15,1;UBERON:0000353,1.86e-15,1;UBERON:0003497,1.86e-15,1;UBERON:0003909,1.86e-15,1;UBERON:0003928,1.86e-15,1;UBERON:0003835,1.86e-15,1;UBERON:0003513,1.86e-15,1;UBERON:0001280,1.86e-15,1;UBERON:0004647,1.86e-15,1;UBERON:0002294,1.86e-15,1;UBERON:0001173,1.86e-15,1;UBERON:0004912,1.86e-15,1;UBERON:0005171,1.86e-15,1;UBERON:0006554,1.72e-13,18;UBERON:0001008,8.22e-13,19;UBERON:0003975,9.46e-13,5;UBERON:0003134,2.44e-08,8;UBERON:0004175,1.63e-07,9;UBERON:0000474,1.63e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0.589257170947335,0.142371680799103,0,0,0,1.15945795480671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0.150722640552623,0.23517741427141,0,117.170414706093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0.756424320671277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0.760902504450237,0,0.494096864172033,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,1.55161989734101,1.26244475802573,0,0.295220295959204,0,0,0,0,0,0,0,0,0,0.575392274901621,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0,0.428674070063185,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,4.22409074514679,4.87213762986786,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0.44449345560323,0,0,0,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0.294397840268795,0.342869252385415,0,0,0.290692833264657,0.376437521661322,0.338458431566706,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.197008964751127,0,0,0,0,0.701794825336225,0.214871054048298,0,0,0 | |||
|short_description=p1@ENSMUST00000142521,p1@uc007kxd.1 | |||
}} |
Revision as of 21:28, 12 September 2013
Short description: | p1@ENSMUST00000142521, p1@uc007kxd.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000142521_5end, CAGE_peak_1_at_uc007kxd.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:46 |
Association with transcript: | 0bp_to_ENSMUST00000142521, uc007kxd.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 1.86e-15 | 1 |
meso-epithelial cell | 1.86e-15 | 1 |
endothelial cell | 1.86e-15 | 1 |
endothelial cell of sinusoid | 1.86e-15 | 1 |
endothelial cell of hepatic sinusoid | 1.86e-15 | 1 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.18e-44 | 3 |
extraembryonic structure | 1.18e-44 | 3 |
membranous layer | 1.18e-44 | 3 |
placenta | 3.41e-30 | 2 |
chorion | 3.41e-30 | 2 |
allantois | 3.41e-30 | 2 |
amnion | 3.44e-16 | 1 |
embryonic uterus | 1.13e-15 | 4 |
uterus | 1.13e-15 | 4 |
bile duct | 1.86e-15 | 1 |
hepatic sinusoid | 1.86e-15 | 1 |
parenchyma | 1.86e-15 | 1 |
abdomen blood vessel | 1.86e-15 | 1 |
sinusoid | 1.86e-15 | 1 |
digestive system duct | 1.86e-15 | 1 |
abdominal segment blood vessel | 1.86e-15 | 1 |
trunk blood vessel | 1.86e-15 | 1 |
liver parenchyma | 1.86e-15 | 1 |
liver lobule | 1.86e-15 | 1 |
biliary system | 1.86e-15 | 1 |
biliary tree | 1.86e-15 | 1 |
biliary bud | 1.86e-15 | 1 |
hepatic duct | 1.86e-15 | 1 |
urinary system structure | 1.72e-13 | 18 |
renal system | 8.22e-13 | 19 |
internal female genitalia | 9.46e-13 | 5 |
female reproductive organ | 2.44e-08 | 8 |
internal genitalia | 1.63e-07 | 9 |
female reproductive system | 1.63e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.