FFCP PHASE1:Hg19::chr3:129325612..129325625,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23129 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9107 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y4D7 | |||
|association_with_transcript=-30bp_to_NM_015103,uc003emx.2_5end | |||
|coexpression_cluster_id=C4280 | |||
|description=CAGE_peak_2_at_PLXND1_5end | |||
|id=chr3:129325612..129325625,- | |||
|ontology_enrichment_celltype=CL:0000115!1.54e-17!35;CL:0002078!2.04e-13!44;CL:0002139!2.23e-12!24;CL:0000213!2.30e-09!57;CL:0000215!2.30e-09!57;CL:0000071!2.89e-09!18;CL:0002546!2.89e-09!18 | |||
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|ontology_enrichment_celltype_v019_2=CL:0000115,7.52e-21,36;CL:0002078,9.10e-16,45;CL:0002139,1.63e-14,24;CL:0000071,9.72e-11,18;CL:0002546,9.72e-11,18;CL:0000213,4.03e-10,58;CL:0000215,4.03e-10,58 | |||
|ontology_enrichment_development_v019=CL:0002546;9.78e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.55e-10!659;UBERON:0001986!2.89e-09!18;UBERON:0004638!2.89e-09!18;UBERON:0004852!2.89e-09!18;UBERON:0000487!1.61e-08!22;UBERON:0002049!3.24e-08!79;UBERON:0007798!3.24e-08!79;UBERON:0003914!3.25e-08!118;UBERON:0000467!4.18e-08!625;UBERON:0000025!5.66e-08!194;UBERON:0000480!6.92e-08!626;UBERON:0000477!1.13e-07!286;UBERON:0006914!1.29e-07!25;UBERON:0001009!1.93e-07!113;UBERON:0004111!7.27e-07!241;UBERON:0004535!7.46e-07!110;UBERON:0002417!8.26e-07!61;UBERON:0000916!8.26e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;9.78e-11;18!UBERON:0001986;9.78e-11;18!UBERON:0004852;9.78e-11;18!UBERON:0000487;6.16e-09;22!UBERON:0006914;1.30e-07;25!UBERON:0001443;4.13e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,9.72e-11,18;UBERON:0001986,9.72e-11,18;UBERON:0004852,9.72e-11,18;UBERON:0000487,4.18e-09,22;UBERON:0002049,2.73e-08,78;UBERON:0007798,2.73e-08,78;UBERON:0006914,8.04e-08,25;UBERON:0001443,2.09e-07,11;UBERON:0001009,2.92e-07,112;UBERON:0000025,3.05e-07,192;UBERON:0003914,4.31e-07,117;UBERON:0004111,6.46e-07,240;UBERON:0000055,7.57e-07,68;UBERON:0000310,8.01e-07,10 | |||
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| |||
|short_description=p2@PLXND1 | |||
}} |
Revision as of 21:30, 12 September 2013
Short description: | p2@PLXND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PLXND1_5end |
Coexpression cluster: | C4280_Renal_Mesenchymal_Hepatic_Endothelial_Macrophage_CD14_Monocytederived |
Association with transcript: | -30bp_to_NM_015103, uc003emx.2_5end |
EntrezGene: | PLXND1 |
HGNC: | 9107 |
UniProt: | Q9Y4D7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 7.52e-21 | 36 |
meso-epithelial cell | 9.10e-16 | 45 |
endothelial cell of vascular tree | 1.63e-14 | 24 |
blood vessel endothelial cell | 9.72e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.72e-11 | 18 |
lining cell | 4.03e-10 | 58 |
barrier cell | 4.03e-10 | 58 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 9.72e-11 | 18 |
endothelium | 9.72e-11 | 18 |
cardiovascular system endothelium | 9.72e-11 | 18 |
simple squamous epithelium | 4.18e-09 | 22 |
vasculature | 2.73e-08 | 78 |
vascular system | 2.73e-08 | 78 |
squamous epithelium | 8.04e-08 | 25 |
chest | 2.09e-07 | 11 |
circulatory system | 2.92e-07 | 112 |
tube | 3.05e-07 | 192 |
epithelial tube | 4.31e-07 | 117 |
anatomical conduit | 6.46e-07 | 240 |
vessel | 7.57e-07 | 68 |
breast | 8.01e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.