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FFCP PHASE1:Mm9::chr11:95896220..95896266,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=27681|HGNC=|MCL_coexpression_id=1535|UniProt=Q9CZ28|association_with_transcript=0bp_to_ENSMUST00000150946,NM_033568,uc007lbb.1_5end|description=CAGE_peak_1_at_Snf8_5end|id=chr11:95896220..95896266,+|ontology_enrichment_celltype=CL:0002321!5.61e-15!70;CL:0000220!5.61e-15!70;CL:0002371!8.37e-13!118;CL:0000548!1.75e-12!115;CL:0000004!1.75e-12!115;CL:0000255!1.75e-12!115;CL:0000144!5.42e-11!121;CL:0000012!5.42e-11!121;CL:0000055!3.08e-10!50;CL:0000221!3.81e-09!44;CL:0000133!3.81e-09!44;CL:0002319!3.96e-09!43;CL:0000117!3.06e-08!23;CL:0000337!3.06e-08!23;CL:0000393!5.14e-07!39;CL:0000211!5.14e-07!39|ontology_enrichment_celltype_v019_2=CL:0002321,5.61e-15,70;CL:0000221,3.81e-09,44;CL:0000133,3.81e-09,44;CL:0002319,3.96e-09,43;CL:0000117,3.06e-08,23;CL:0000337,3.06e-08,23;CL:0000393,5.14e-07,39;CL:0000211,5.14e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.89e-08!73;UBERON:0005743!3.89e-08!73;UBERON:0000073!5.15e-08!75;UBERON:0001016!5.15e-08!75|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.89e-08,73;UBERON:0001016,5.15e-08,75;UBERON:0011216,5.46e-08,194|phase1_expression=28.1861970904437,142.730941724499,124.214792353343,121.590612945346,129.231098326158,72.6917247378483,67.5140531321069,22.0800883085095,15.7683368809867,22.4701945269114,39.0376967554151,37.4929147278081,32.5281386869291,27.6248471644032,40.9725007033265,41.3049545475245,37.7763414189199,27.918401634204,28.6569166235994,29.7072756258621,46.0934632618798,51.6312946244604,58.7699525562605,93.5955673341429,97.0401258914129,132.073351746455,119.751834932223,92.4371588222464,99.1922249562272,100.307991644452,94.0137365178492,59.0578526317457,68.2721914218873,31.6963362030877,38.9949686664221,41.2261920489061,37.7713309085383,54.409111995798,51.5681327385708,42.4054232618777,48.8232135065742,57.3758207365094,59.7177734228319,50.6105208261821,48.863680847806,64.2413632565885,85.2806565339363,91.1345153670267,73.3751850333136,79.9106885195305,77.6924640020762,89.1265899062824,50.3347818173209,39.1695556686126,36.6342241065286,54.5390004396208,57.5932214276901,58.270946427351,61.7065205621773,52.8990979272033,75.4259370172353,96.2318471076335,96.9331327761142,100.788768335517,90.9757053561617,105.861537126969,70.7056260823435,83.7595905600989,45.0012917418793,55.6224465926566,65.8317129029826,60.8436596780102,63.6101397940647,56.8357308357387,59.999264857416,65.2645338493115,102.407769329431,82.4860204030313,83.1011344916277,50.5124482006642,64.9562269577109,63.030517837368,92.9679386674599,108.613183736114,87.0950012327818,56.8633169964179,51.8232918108735,49.3958531437047,40.5135134332535,46.5520810257799,13.9134954576805,45.6024654800135,39.4383373550495,86.8922138536886,62.3785360749762,47.0428231452202,45.9253253830829,33.7452038704554,61.309497086277,69.2545566040267,48.4501364031781,65.4465034813021,127.402619853323,170.656008756799,60.4010004421287,68.9138834092268,68.7513245220105,53.6664234679582,27.188477782953,36.9620926271414,47.0145235536228,45.6698217468212,50.0435629045647,50.4920845851286,30.9258299766904,51.3976358538373,52.1581381919529,26.6062816732637,33.6152009740952,35.1034064385878,36.2180090275045,51.8816520854688,46.5979403045305,32.2058876712702,37.281513812795,69.995233127154,11.981512450592,56.3908567133803,26.3035370041244,53.9246301857362,51.6975681185048,51.015666957823,58.5787959047972,56.0016851553424,60.6741090113916,62.3006450180189,32.8941145236522,45.532951243294,58.3789571981789,31.5662783829711,31.7493880828997,41.6122809024586,30.2504378072987,31.0451924741573,27.5547821562878,32.1565437914973,38.2303036203694,31.8205146008989,26.5148631307396,25.5293208226556,29.2078866112155,34.8521214559844,33.6437171562973,29.9496863209063,38.2754773718775,31.6464484241404,45.6438571753603,54.0430604940902,26.1430419443945,29.8261112451123,38.2277477769187,37.6329708453521,22.0172604094246,37.9754967272489,32.8588950450116,38.8331687733181,39.7044634071436,39.933747089572,47.5577966249959,39.564358843062,34.6163816760804,39.7663965796904,47.2032747875759,37.4435908341437,61.8252448778534,39.7211803784038,75.3354825203059,61.0880808992787,33.0596788329613,32.9776074041823,28.8663113361489,28.235693447268,40.6951820236113,42.6105402492133,66.4340686162316,54.1859561041996,60.8231205296652,53.1213780349873,53.615123957758,53.0303451105991,73.9192130571454,64.521772534415,35.2782295772732,34.3888022955284,23.6686244913469,32.9915151109409,37.0449250490165,32.3326129694369,37.6889761260573,42.8069429140846,54.0075623774329,63.3027450918837,59.5869780445169,48.5519257633834,45.0120098809235,52.6177342980558,48.6864291332407,41.7236486371681,43.2863948028414,43.4421167550724,33.3998567156573,54.6377212244282,41.6927798929328,37.9583766621873,53.3584421025899,67.9437181677731,64.2242740408446,54.5161179140605,33.0708210398222,38.8457394129494,26.5632911600502,38.7018795567429,36.3769884847178,26.2984824183651,33.5641533649279,37.0753930929818,36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|EntrezGene=27681
|HGNC=
|MCL_coexpression_id=1535
|UniProt=Q9CZ28
|association_with_transcript=0bp_to_ENSMUST00000150946,NM_033568,uc007lbb.1_5end
|description=CAGE_peak_1_at_Snf8_5end
|id=chr11:95896220..95896266,+
|ontology_enrichment_celltype=CL:0002321!5.61e-15!70;CL:0000220!5.61e-15!70;CL:0002371!8.37e-13!118;CL:0000548!1.75e-12!115;CL:0000004!1.75e-12!115;CL:0000255!1.75e-12!115;CL:0000144!5.42e-11!121;CL:0000012!5.42e-11!121;CL:0000055!3.08e-10!50;CL:0000221!3.81e-09!44;CL:0000133!3.81e-09!44;CL:0002319!3.96e-09!43;CL:0000117!3.06e-08!23;CL:0000337!3.06e-08!23;CL:0000393!5.14e-07!39;CL:0000211!5.14e-07!39
|ontology_enrichment_celltype_v019_2=CL:0002321,5.61e-15,70;CL:0000221,3.81e-09,44;CL:0000133,3.81e-09,44;CL:0002319,3.96e-09,43;CL:0000117,3.06e-08,23;CL:0000337,3.06e-08,23;CL:0000393,5.14e-07,39;CL:0000211,5.14e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.89e-08!73;UBERON:0005743!3.89e-08!73;UBERON:0000073!5.15e-08!75;UBERON:0001016!5.15e-08!75
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.89e-08,73;UBERON:0001016,5.15e-08,75;UBERON:0011216,5.46e-08,194
|phase1_expression=28.1861970904437,142.730941724499,124.214792353343,121.590612945346,129.231098326158,72.6917247378483,67.5140531321069,22.0800883085095,15.7683368809867,22.4701945269114,39.0376967554151,37.4929147278081,32.5281386869291,27.6248471644032,40.9725007033265,41.3049545475245,37.7763414189199,27.918401634204,28.6569166235994,29.7072756258621,46.0934632618798,51.6312946244604,58.7699525562605,93.5955673341429,97.0401258914129,132.073351746455,119.751834932223,92.4371588222464,99.1922249562272,100.307991644452,94.0137365178492,59.0578526317457,68.2721914218873,31.6963362030877,38.9949686664221,41.2261920489061,37.7713309085383,54.409111995798,51.5681327385708,42.4054232618777,48.8232135065742,57.3758207365094,59.7177734228319,50.6105208261821,48.863680847806,64.2413632565885,85.2806565339363,91.1345153670267,73.3751850333136,79.9106885195305,77.6924640020762,89.1265899062824,50.3347818173209,39.1695556686126,36.6342241065286,54.5390004396208,57.5932214276901,58.270946427351,61.7065205621773,52.8990979272033,75.4259370172353,96.2318471076335,96.9331327761142,100.788768335517,90.9757053561617,105.861537126969,70.7056260823435,83.7595905600989,45.0012917418793,55.6224465926566,65.8317129029826,60.8436596780102,63.6101397940647,56.8357308357387,59.999264857416,65.2645338493115,102.407769329431,82.4860204030313,83.1011344916277,50.5124482006642,64.9562269577109,63.030517837368,92.9679386674599,108.613183736114,87.0950012327818,56.8633169964179,51.8232918108735,49.3958531437047,40.5135134332535,46.5520810257799,13.9134954576805,45.6024654800135,39.4383373550495,86.8922138536886,62.3785360749762,47.0428231452202,45.9253253830829,33.7452038704554,61.309497086277,69.2545566040267,48.4501364031781,65.4465034813021,127.402619853323,170.656008756799,60.4010004421287,68.9138834092268,68.7513245220105,53.6664234679582,27.188477782953,36.9620926271414,47.0145235536228,45.6698217468212,50.0435629045647,50.4920845851286,30.9258299766904,51.3976358538373,52.1581381919529,26.6062816732637,33.6152009740952,35.1034064385878,36.2180090275045,51.8816520854688,46.5979403045305,32.2058876712702,37.281513812795,69.995233127154,11.981512450592,56.3908567133803,26.3035370041244,53.9246301857362,51.6975681185048,51.015666957823,58.5787959047972,56.0016851553424,60.6741090113916,62.3006450180189,32.8941145236522,45.532951243294,58.3789571981789,31.5662783829711,31.7493880828997,41.6122809024586,30.2504378072987,31.0451924741573,27.5547821562878,32.1565437914973,38.2303036203694,31.8205146008989,26.5148631307396,25.5293208226556,29.2078866112155,34.8521214559844,33.6437171562973,29.9496863209063,38.2754773718775,31.6464484241404,45.6438571753603,54.0430604940902,26.1430419443945,29.8261112451123,38.2277477769187,37.6329708453521,22.0172604094246,37.9754967272489,32.8588950450116,38.8331687733181,39.7044634071436,39.933747089572,47.5577966249959,39.564358843062,34.6163816760804,39.7663965796904,47.2032747875759,37.4435908341437,61.8252448778534,39.7211803784038,75.3354825203059,61.0880808992787,33.0596788329613,32.9776074041823,28.8663113361489,28.235693447268,40.6951820236113,42.6105402492133,66.4340686162316,54.1859561041996,60.8231205296652,53.1213780349873,53.615123957758,53.0303451105991,73.9192130571454,64.521772534415,35.2782295772732,34.3888022955284,23.6686244913469,32.9915151109409,37.0449250490165,32.3326129694369,37.6889761260573,42.8069429140846,54.0075623774329,63.3027450918837,59.5869780445169,48.5519257633834,45.0120098809235,52.6177342980558,48.6864291332407,41.7236486371681,43.2863948028414,43.4421167550724,33.3998567156573,54.6377212244282,41.6927798929328,37.9583766621873,53.3584421025899,67.9437181677731,64.2242740408446,54.5161179140605,33.0708210398222,38.8457394129494,26.5632911600502,38.7018795567429,36.3769884847178,26.2984824183651,33.5641533649279,37.0753930929818,36.2560831444239,34.7699562748577,35.0800491046472,40.4742387347873,41.4443956478149,40.6463854614048,82.9352061665997,76.6907014184381,46.7176059368084,40.8386384531004,60.6881230153854,66.4590262977792,46.7214594323525,40.1428774254953,43.8556424988597,43.3387006169269,44.8080667284222,46.3599468027951,42.7773454238197,42.178403087536,38.457016659115,44.7151462604307,43.4816555741176,50.7687679946455,27.3944364451958,41.3112200508032,32.4145049113616,28.7048013972212,39.8235415019888,41.7582694186568,51.6973282409724,56.7701290065253,60.2415861476776,50.4193642628041,44.7080947181023,51.9853233152833,40.2842037574735,38.5564844681696,50.6009321159994,70.1321694087671,37.1079170271629,37.0925853704499,46.4397674780089,43.9390921814764,31.0345408873979,38.8844022372514,31.9225099968115,37.4491887410957,42.7102508675953,51.6870252907721,49.8394179604214,35.9452031412427,28.0948102450876,34.1974284342644,42.019065089104,37.588266041619,51.5921080834836,58.2235448313,41.0090113914846,40.6582129887548,38.3352671655303,53.1199048753229,36.7707472569558,47.8146382001632,16.9978429993855,17.3539800881336,18.2423965421839,39.1414953386197,24.67420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|short_description=p1@Snf8
}}

Revision as of 21:37, 12 September 2013

Short description:p1@Snf8
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Snf8_5end
Coexpression cluster:MCL_coexpression_mm9:1535
Association with transcript: 0bp_to_ENSMUST00000150946, NM_033568, uc007lbb.1_5end
EntrezGene:Snf8
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p1@Snf8

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G728.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5142.73
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6124.21
CD326+ enterocyte, pool1.CNhs13542.11848-124I3121.59
CD326+ enterocyte, pool2.CNhs13197.11849-124I4129.23
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I772.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I867.51
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E922.08
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E715.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F222.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E639.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F137.49
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E432.53
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E827.62
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A140.97
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A341.30
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A537.78
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A227.92
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A428.66
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A629.71
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A346.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H251.63
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I958.77
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D193.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D297.04
GP2+ M cell, pool1.CNhs13228.11845-124H9132.07
GP2+ M cell, pool2.CNhs13231.11846-124I1119.75
GP2+ M cell, pool3.CNhs13240.11847-124I292.44
Ileum epithelium, pool1.CNhs13199.10252-104B999.19
Ileum epithelium, pool2.CNhs13232.10253-104C1100.31
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C894.01
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I359.06
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G668.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F538.99
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F641.23
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F737.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G854.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H151.57
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H342.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G948.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H257.38
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H459.72
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D850.61
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D948.86
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B364.24
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B785.28
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C291.13
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B873.38
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C379.91
Mouse Astrocytes, donor2.CNhs12078.11552-120C477.69
Mouse Astrocytes, donor3.CNhs12107.11633-122C489.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A250.33
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I939.17
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A136.63
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C154.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E157.59
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C558.27
Mouse Granule cells, donor1.CNhs12131.11713-123C361.71
Mouse Granule cells, donor2.CNhs12357.11731-123E352.90
Mouse Granule cells, donor3.CNhs12108.11636-122C775.43
Mouse Meningeal cells, donor1.CNhs12132.11716-123C696.23
Mouse Meningeal cells, donor3.CNhs12109.11639-122D196.93
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7100.79
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E790.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2105.86
Mouse Microglia, donor1.CNhs12629.11718-123C870.71
Mouse Microglia, donor2.CNhs12634.11736-123E883.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D545.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F555.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D965.83
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F160.84
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D563.61
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D256.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F260.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D665.26
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3102.41
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F382.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D783.10
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D450.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F464.96
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D863.03
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E492.97
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5108.61
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I687.10
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D656.86
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F651.82
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E149.40
Mouse Schwann, donor1.CNhs12507.11728-123D940.51
Mouse Schwann, donor2.CNhs12573.11746-123F946.55
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G313.91
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F745.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C439.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C886.89
Mouse hepatocyte, donor6.CNhs13090.11822-124F462.38
Mouse hepatocyte, donor8.CNhs13091.11824-124F647.04
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A745.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I733.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E361.31
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I869.25
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G648.45
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H165.45
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8127.40
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6170.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G160.40
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G268.91
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G368.75
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B653.67
accessory axillary lymph node, adult.CNhs10475.1063-29H927.19
adrenal gland, adult.CNhs10508.49-24D736.96
adrenal gland, embryo E14.CNhs11038.406-44C547.01
adrenal gland, embryo E16.CNhs11004.1254-43D645.67
adrenal gland, embryo E17.CNhs11043.1263-45I150.04
adrenal gland, embryo E18.CNhs11026.1262-18F550.49
adrenal gland, neonate N00.CNhs11191.1311-23C130.93
adrenal gland, neonate N25.CNhs11223.1377-27I351.40
amnion, adult pregnant day17.5.CNhs10488.583-22A852.16
aorta, adult.CNhs10498.46-23H126.61
bone (os femoris), adult.CNhs10483.56-12G233.62
bone (os femoris), neonate N02.CNhs11227.1985-43F535.10
bone (os femoris), neonate N16.CNhs11225.1525-43A636.22
bone (os femoris), neonate N20.CNhs11195.1350-25C351.88
cecum, adult.CNhs10467.37-13H446.60
cerebellum, adult.CNhs10494.15-8B232.21
cerebellum, neonate N30.CNhs11135.1395-42I237.28
colon, adult.CNhs10468.36-18H770.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C711.98
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D156.39
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D426.30
corpora quadrigemina, adult.CNhs10501.16-22A453.92
corpus striatum, adult.CNhs10487.19-21D851.70
corpus striatum, neonate N00.CNhs11226.630-43F151.02
cortex, adult.CNhs10473.12-14D558.58
cortex, neonate N30.CNhs11107.1392-42F256.00
diencephalon, adult.CNhs10482.20-12F260.67
diencephalon, neonate N30.CNhs11201.1388-42B262.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B132.89
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A245.53
epididymis, adult.CNhs10490.58-23B258.38
eyeball, adult.CNhs10484.31-12G431.57
eyeball, embryo E12.CNhs11016.345-16C631.75
eyeball, embryo E14.CNhs10521.399-16E241.61
eyeball, embryo E15.CNhs10593.426-16C930.25
eyeball, embryo E17.CNhs11023.1261-18D431.05
eyeball, neonate N00.CNhs11207.633-15C627.55
eyeball, neonate N01.CNhs11140.1532-43E732.16
eyeball, neonate N02.CNhs11205.1551-44G838.23
eyeball, neonate N16.CNhs11188.777-19A231.82
forelimb, embryo E11.CNhs10596.335-25E226.51
forelimb, embryo E12.CNhs10600.359-14H225.53
forelimb, embryo E13.CNhs10589.384-1E229.21
forelimb, embryo E14.CNhs10577.413-26A834.85
forelimb, embryo E15.CNhs11007.437-20E733.64
forelimb, embryo E17.CNhs10598.1517-43C429.95
forelimb, embryo E18.CNhs11008.1520-43B538.28
gonad, embryo E13.CNhs11044.1564-45I631.65
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C845.64
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D254.04
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D526.14
heart, embryo E11.CNhs10586.331-24E929.83
heart, embryo E12.CNhs11015.353-12F538.23
heart, embryo E13.CNhs11013.376-3I937.63
heart, embryo E14.CNhs10597.403-26D422.02
heart, embryo E15.CNhs11017.431-16C837.98
heart, embryo E16.CNhs11021.457-17C632.86
heart, embryo E17.CNhs11025.479-18E538.83
heart, embryo E18.CNhs11030.1283-20G339.70
heart, neonate N00.CNhs11213.639-21E339.93
heart, neonate N03.CNhs11221.1349-25I247.56
heart, neonate N10.CNhs11118.749-24G139.56
heart, neonate N16.CNhs11209.782-15G134.62
heart, neonate N20.CNhs11127.821-26I639.77
heart, neonate N25.CNhs11196.1351-25D347.20
heart, neonate N30.CNhs11202.1390-42D237.44
hippocampus, adult.CNhs10478.13-16E861.83
hippocampus, neonate N00.CNhs11228.627-43G139.72
intestinal mucosa, adult.CNhs10506.860-29I375.34
intestine, adult.CNhs10496.178-9A361.09
intestine, embryo E12.CNhs11019.1251-16I533.06
intestine, embryo E13.CNhs11010.381-16D532.98
intestine, embryo E15.CNhs10602.976-16D828.87
intestine, embryo E16.CNhs10585.463-22H428.24
intestine, embryo E17.CNhs10582.482-18D340.70
intestine, embryo E18.CNhs10526.1289-20F742.61
intestine, neonate N00.CNhs11126.644-26D166.43
intestine, neonate N01.CNhs11192.1322-23E954.19
intestine, neonate N06.CNhs11102.688-20B860.82
intestine, neonate N07.CNhs11095.720-20F253.12
intestine, neonate N10.CNhs11098.755-23A553.62
intestine, neonate N20.CNhs11187.827-18D153.03
intestine, neonate N25.CNhs11121.1352-25E373.92
intestine, neonate N30.CNhs11131.1384-42G164.52
kidney, embryo E14.CNhs10606.411-4I935.28
kidney, embryo E15.CNhs10997.434-16F834.39
kidney, embryo E16.CNhs10584.464-22A523.67
kidney, embryo E17.CNhs11028.483-18I232.99
kidney, embryo E18.CNhs11001.1288-20C737.04
kidney, neonate N00.CNhs11214.646-21G732.33
kidney, neonate N10.CNhs11206.758-6D537.69
kidney, neonate N20.CNhs11113.832-19I142.81
kidney, neonate N25.CNhs11122.1353-25F354.01
kidney, neonate N30.CNhs11203.1385-42H163.30
liver, adult pregnant day01.CNhs10466.508-5B259.59
liver, embryo E12.CNhs10601.355-15F848.55
liver, embryo E13.CNhs10524.378-3H645.01
liver, embryo E14.CNhs10594.409-16E152.62
liver, embryo E15.CNhs10520.433-16D748.69
liver, embryo E16.CNhs10523.462-17F541.72
liver, embryo E17.CNhs10510.481-18A343.29
liver, embryo E18.CNhs10579.499-43G443.44
liver, neonate N00.CNhs11117.641-24F433.40
liver, neonate N03.CNhs11123.1345-25G254.64
liver, neonate N06.CNhs11101.684-20A841.69
liver, neonate N07.CNhs11103.716-20H237.96
liver, neonate N10.CNhs11115.751-24B953.36
liver, neonate N20.CNhs11220.823-25A367.94
liver, neonate N25.CNhs11198.1368-26H164.22
liver, neonate N30.CNhs11106.1382-42D154.52
lung, adult.CNhs10474.28-22B133.07
lung, embryo E12.CNhs10522.354-16G238.85
lung, embryo E14.CNhs10604.404-26F826.56
lung, embryo E15.CNhs11020.432-17C538.70
lung, embryo E16.CNhs10998.458-17B636.38
lung, embryo E17.CNhs10605.480-44A626.30
lung, embryo E18.CNhs10583.1287-20I633.56
lung, neonate N00.CNhs11224.640-42C637.08
lung, neonate N06.CNhs11212.683-20E536.26
lung, neonate N07.CNhs11111.715-19A334.77
lung, neonate N10.CNhs11219.750-23E635.08
lung, neonate N20.CNhs11109.822-18A440.47
lung, neonate N25.CNhs11119.1359-25C741.44
lung, neonate N30.CNhs11133.1394-42H240.65
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A182.94
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A176.69
mammary gland, adult lactating day02.CNhs10480.595-22B646.72
mammary gland, adult pregnant day19.CNhs10476.588-5H240.84
medulla oblongata, adult.CNhs10477.17-12C260.69
medulla oblongata, neonate N30.CNhs11200.1396-42A366.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C746.72
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C240.14
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E143.86
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E243.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E344.81
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D746.36
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D842.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D942.18
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D438.46
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D544.72
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D643.48
olfactory brain, adult.CNhs10489.18-22I950.77
ovary, adult.CNhs10507.91-2I727.39
ovary, embryo E18.CNhs11040.505-44H741.31
ovary, neonate N00.CNhs11217.1299-22I432.41
oviduct, adult pregnant day01.CNhs10500.988-6G628.70
pancreas, adult.CNhs10486.34-16E439.82
pancreas, embryo E14.CNhs11012.405-44F441.76
pancreas, embryo E15.CNhs11042.1556-45F251.70
pancreas, embryo E16.CNhs11003.460-26E556.77
pancreas, embryo E17.CNhs10599.1558-45G360.24
pancreas, embryo E18.CNhs10580.1535-43I750.42
pancreas, neonate N00.CNhs11105.645-26G944.71
pancreas, neonate N01.CNhs11138.1531-43D751.99
pancreas, neonate N02.CNhs11139.1539-43D840.28
pancreas, neonate N16.CNhs11136.787-43B638.56
pancreas, neonate N25.CNhs11094.1555-45E250.60
pancreas, neonate N30.CNhs11182.1548-44H570.13
pituitary gland, adult.CNhs10493.21-1G837.11
pituitary gland, embryo E12.CNhs11018.346-16E637.09
pituitary gland, embryo E13.CNhs11009.370-44C746.44
pituitary gland, embryo E14.CNhs11037.398-44A543.94
pituitary gland, embryo E15.CNhs10592.427-16B931.03
pituitary gland, embryo E16.CNhs11036.449-43F638.88
pituitary gland, embryo E17.CNhs11039.1265-44F531.92
pituitary gland, neonate N00.CNhs11190.1308-22E937.45
placenta, adult pregnant day10.CNhs10472.539-13I742.71
placenta, adult pregnant day17.CNhs10464.577-18G351.69
prostate, adult.CNhs10470.859-1F849.84
skin, adult.CNhs10492.30-1C335.95
skin, neonate N00.CNhs11124.650-25G428.09
skin, neonate N03.CNhs11215.662-22H334.20
skin, neonate N06.CNhs11097.693-20I542.02
skin, neonate N10.CNhs11108.762-6C437.59
small intestine, neonate N16.CNhs11114.790-21I151.59
spinal cord, adult.CNhs10505.24-13C958.22
spleen, adult.CNhs10465.25-2G241.01
spleen, embryo E16.CNhs11035.461-43C140.66
spleen, embryo E18.CNhs11011.1271-21F238.34
spleen, neonate N10.CNhs11116.752-24D153.12
spleen, neonate N20.CNhs11112.824-19H136.77
spleen, neonate N25.CNhs11099.1354-25G347.81
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C617.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C917.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D318.24
stomach, adult.CNhs10503.33-1H639.14
stomach, embryo E12.CNhs10588.356-43E324.67
stomach, embryo E15.CNhs10603.1252-16G828.87
stomach, embryo E16.CNhs11022.459-17D439.31
stomach, embryo E17.CNhs11006.1035-18D543.28
stomach, embryo E18.CNhs10999.1286-20C648.48
stomach, neonate N03.CNhs11193.1340-24B852.46
stomach, neonate N07.CNhs11210.718-18A940.58
stomach, neonate N25.CNhs11104.1355-25E461.77
stomach, neonate N30.CNhs11134.1386-42I173.36
submandibular gland, adult.CNhs10469.59-29C142.87
testis, adult.CNhs10504.57-7G586.81
testis, embryo E13.CNhs11031.389-23F530.80
testis, embryo E15.CNhs11034.443-27C544.67
testis, embryo E16.CNhs11033.470-26G533.64
testis, embryo E17.CNhs11029.486-18I544.43
testis, embryo E18.CNhs11027.503-18G532.95
testis, neonate N00.CNhs11189.1300-22B728.75
testis, neonate N07.CNhs11222.726-26I441.93
testis, neonate N10.CNhs11204.763-44D969.94
testis, neonate N20.CNhs11110.839-18H355.81
testis, neonate N30.CNhs11130.1391-42E261.64
thymus, adult.CNhs10471.38-12B530.02
thymus, embryo E14.CNhs11041.402-44I457.57
thymus, embryo E15.CNhs11005.430-45I251.46
thymus, embryo E16.CNhs11002.456-26C550.93
thymus, embryo E17.CNhs10581.478-18C136.88
thymus, embryo E18.CNhs10595.1273-19G438.15
thymus, neonate N02.CNhs11181.1541-43F843.15
thymus, neonate N03.CNhs11137.2104-43C740.61
thymus, neonate N06.CNhs11197.681-26C442.00
thymus, neonate N07.CNhs11211.713-19D342.29
thymus, neonate N10.CNhs11194.748-24E439.32
thymus, neonate N20.CNhs11186.820-7A239.37
thymus, neonate N25.CNhs11125.1362-25G740.70
thymus, neonate N30.CNhs11132.1393-42G235.88
tongue, adult.CNhs10499.32-1B431.06
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H364.15
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F754.82
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G550.87
urinary bladder, adult.CNhs10481.879-12E432.46
uterus, adult pregnant day19.CNhs10497.590-15F543.73
uterus, adult.CNhs10509.92-27E528.75
vagina, adult.CNhs10502.89-27D542.02
vesicular gland, adult.CNhs10491.51-27F840.13
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A145.18
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A245.11
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A348.12
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D749.84
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A455.49
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A545.32
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A647.93
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A755.84
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A826.74
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A947.12
whole body, embryo E11.CNhs11014.324-5I847.22
whole body, embryo E12.CNhs10587.857-27C927.93
whole body, embryo E13.CNhs10512.372-23H234.32
whole body, embryo E14.5.CNhs10578.420-27D234.52
whole body, embryo E14.CNhs10519.395-14B146.53
whole body, embryo E16.CNhs10514.453-14F251.48
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G531.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G534.61
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G527.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G528.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G534.47
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G530.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G533.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G527.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G532.39
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G533.82
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G539.52
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G535.69
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G534.20
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G537.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G541.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G538.69
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G541.49
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G537.50
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G536.61
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G535.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G535.85
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G538.93
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G537.75
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G539.28
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G536.18
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G537.14
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G537.65
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G533.16
whole body, embryo E17.5.CNhs10513.490-9F934.34
whole body, embryo E17.CNhs10517.475-3I536.97
whole body, embryo E18.CNhs10516.493-3B330.88
whole body, neonate N00.CNhs10525.657-19C223.21
whole body, neonate N01.CNhs10576.659-23C627.93
whole body, neonate N06.CNhs10515.692-21D132.21
whole body, neonate N10.CNhs10518.761-6B425.97





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
embryonic cell5.61e-1570
ectodermal cell3.81e-0944
neurectodermal cell3.81e-0944
neural cell3.96e-0943
CNS neuron (sensu Vertebrata)3.06e-0823
neuroblast (sensu Vertebrata)3.06e-0823
electrically responsive cell5.14e-0739
electrically active cell5.14e-0739

Uber anatomy
Ontology termp-valuen
central nervous system3.89e-0873
nervous system5.15e-0875
organ system subdivision5.46e-08194







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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