FFCP PHASE1:Mm9::chr11:97297232..97297265,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:97297232..97297265,-|id=chr11:97297232..97297265,-|ontology_enrichment_celltype=CL:0002320!5.28e-07!46;CL:0000134!5.28e-07!46;CL:0000049!8.40e-07!19|ontology_enrichment_celltype_v019_2=CL:0002476,2.29e-14,2;CL:0000213,5.62e-08,1;CL:0002078,5.62e-08,1;CL:0000115,5.62e-08,1;CL:0002262,5.62e-08,1;CL:1000398,5.62e-08,1;CL:0002194,1.23e-07,4;CL:0000766,1.23e-07,4;CL:0000234,1.23e-07,4;CL:0000576,1.23e-07,4;CL:0000235,1.23e-07,4;CL:0000864,1.23e-07,4;CL:0002009,1.23e-07,4;CL:0000040,1.23e-07,4;CL:0000559,1.23e-07,4;CL:0000355,1.61e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.08e-21,3;DOID:4045,2.08e-21,3;DOID:0050686,5.11e-11,6|ontology_enrichment_uberon=UBERON:0002204!2.39e-09!32;UBERON:0002384!5.28e-07!46;UBERON:0000055!9.22e-07!5;UBERON:0001981!9.22e-07!5;UBERON:0002049!9.22e-07!5;UBERON:0007500!9.22e-07!5;UBERON:0007798!9.22e-07!5;UBERON:0004537!9.22e-07!5;UBERON:0006965!9.22e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0002394,5.62e-08,1;UBERON:0001281,5.62e-08,1;UBERON:0000353,5.62e-08,1;UBERON:0003497,5.62e-08,1;UBERON:0003909,5.62e-08,1;UBERON:0003928,5.62e-08,1;UBERON:0003835,5.62e-08,1;UBERON:0003513,5.62e-08,1;UBERON:0001280,5.62e-08,1;UBERON:0004647,5.62e-08,1;UBERON:0002294,5.62e-08,1;UBERON:0001173,5.62e-08,1;UBERON:0004912,5.62e-08,1;UBERON:0005171,5.62e-08,1;UBERON:0001134,1.61e-07,9;UBERON:0002036,1.61e-07,9;UBERON:0002385,1.61e-07,9;UBERON:0000486,1.61e-07,9;UBERON:0007503,1.61e-07,9;UBERON:0001015,1.61e-07,9;UBERON:0002329,1.61e-07,9;UBERON:0003082,1.61e-07,9;UBERON:0003059,1.61e-07,9;UBERON:0007282,1.61e-07,9;UBERON:0004290,1.61e-07,9;UBERON:0009618,1.61e-07,9;UBERON:0002204,2.31e-07,32;UBERON:0000383,8.12e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0.42438965179803,0.17008658030214,0.992909512008853,1.30599894569468,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,11.3003540298965,7.813353445238,3.14114246384279,63.5290007073495,11.6117732442936,5.82612423637384,0.755380907853464,0.608261587317087,0.367093504323363,0.782391344348039,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,1.4209602298922,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,2.89864488701678,0.860423876981386,0,0,0,0,0,0.852151612890289,0.259786004602869,0.35333957451034,0,0,7.64415719119937,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0.230615497256059,0,0,0,0,0.289198713839823,0.884610551949874,0,0.441683036920787,0,0,0,0,0,0.11981512450592,2.39961092397363,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0.420883711772948,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0.51469581422943,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0.494096864172033,0,0.397912944082302,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0.296452627087149,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0.744281895337007,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,4.52373851817817,2.71952841909355,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608929898229199,0,0.42366414172764,0,0.49465875882444,0,0.120625849856312,0,0,0,0,0,0,0,0.188368457004691,0,0,0.169978429993855,0.279902904647316,0,0,0.158167996790568,0,0.108005340821801,0,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358855426437903,0.839423081820392,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr11:97297232..97297265,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:97297232..97297265,- | |||
|id=chr11:97297232..97297265,- | |||
|ontology_enrichment_celltype=CL:0002320!5.28e-07!46;CL:0000134!5.28e-07!46;CL:0000049!8.40e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,2.29e-14,2;CL:0000213,5.62e-08,1;CL:0002078,5.62e-08,1;CL:0000115,5.62e-08,1;CL:0002262,5.62e-08,1;CL:1000398,5.62e-08,1;CL:0002194,1.23e-07,4;CL:0000766,1.23e-07,4;CL:0000234,1.23e-07,4;CL:0000576,1.23e-07,4;CL:0000235,1.23e-07,4;CL:0000864,1.23e-07,4;CL:0002009,1.23e-07,4;CL:0000040,1.23e-07,4;CL:0000559,1.23e-07,4;CL:0000355,1.61e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.08e-21,3;DOID:4045,2.08e-21,3;DOID:0050686,5.11e-11,6 | |||
|ontology_enrichment_uberon=UBERON:0002204!2.39e-09!32;UBERON:0002384!5.28e-07!46;UBERON:0000055!9.22e-07!5;UBERON:0001981!9.22e-07!5;UBERON:0002049!9.22e-07!5;UBERON:0007500!9.22e-07!5;UBERON:0007798!9.22e-07!5;UBERON:0004537!9.22e-07!5;UBERON:0006965!9.22e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,5.62e-08,1;UBERON:0001281,5.62e-08,1;UBERON:0000353,5.62e-08,1;UBERON:0003497,5.62e-08,1;UBERON:0003909,5.62e-08,1;UBERON:0003928,5.62e-08,1;UBERON:0003835,5.62e-08,1;UBERON:0003513,5.62e-08,1;UBERON:0001280,5.62e-08,1;UBERON:0004647,5.62e-08,1;UBERON:0002294,5.62e-08,1;UBERON:0001173,5.62e-08,1;UBERON:0004912,5.62e-08,1;UBERON:0005171,5.62e-08,1;UBERON:0001134,1.61e-07,9;UBERON:0002036,1.61e-07,9;UBERON:0002385,1.61e-07,9;UBERON:0000486,1.61e-07,9;UBERON:0007503,1.61e-07,9;UBERON:0001015,1.61e-07,9;UBERON:0002329,1.61e-07,9;UBERON:0003082,1.61e-07,9;UBERON:0003059,1.61e-07,9;UBERON:0007282,1.61e-07,9;UBERON:0004290,1.61e-07,9;UBERON:0009618,1.61e-07,9;UBERON:0002204,2.31e-07,32;UBERON:0000383,8.12e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0.42438965179803,0.17008658030214,0.992909512008853,1.30599894569468,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,11.3003540298965,7.813353445238,3.14114246384279,63.5290007073495,11.6117732442936,5.82612423637384,0.755380907853464,0.608261587317087,0.367093504323363,0.782391344348039,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,1.4209602298922,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,2.89864488701678,0.860423876981386,0,0,0,0,0,0.852151612890289,0.259786004602869,0.35333957451034,0,0,7.64415719119937,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0.230615497256059,0,0,0,0,0.289198713839823,0.884610551949874,0,0.441683036920787,0,0,0,0,0,0.11981512450592,2.39961092397363,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0.420883711772948,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0.51469581422943,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0.494096864172033,0,0.397912944082302,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0.296452627087149,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0.744281895337007,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,4.52373851817817,2.71952841909355,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608929898229199,0,0.42366414172764,0,0.49465875882444,0,0.120625849856312,0,0,0,0,0,0,0,0.188368457004691,0,0,0.169978429993855,0.279902904647316,0,0,0.158167996790568,0,0.108005340821801,0,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358855426437903,0.839423081820392,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr11:97297232..97297265,- | |||
}} |
Revision as of 21:43, 12 September 2013
Short description: | p@chr11:97297232..97297265, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:97297232..97297265, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 2.29e-14 | 2 |
lining cell | 5.62e-08 | 1 |
meso-epithelial cell | 5.62e-08 | 1 |
endothelial cell | 5.62e-08 | 1 |
endothelial cell of sinusoid | 5.62e-08 | 1 |
endothelial cell of hepatic sinusoid | 5.62e-08 | 1 |
monopoietic cell | 1.23e-07 | 4 |
myeloid leukocyte | 1.23e-07 | 4 |
phagocyte | 1.23e-07 | 4 |
monocyte | 1.23e-07 | 4 |
macrophage | 1.23e-07 | 4 |
tissue-resident macrophage | 1.23e-07 | 4 |
macrophage dendritic cell progenitor | 1.23e-07 | 4 |
monoblast | 1.23e-07 | 4 |
promonocyte | 1.23e-07 | 4 |
multi-potent skeletal muscle stem cell | 1.61e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bile duct | 5.62e-08 | 1 |
hepatic sinusoid | 5.62e-08 | 1 |
parenchyma | 5.62e-08 | 1 |
abdomen blood vessel | 5.62e-08 | 1 |
sinusoid | 5.62e-08 | 1 |
digestive system duct | 5.62e-08 | 1 |
abdominal segment blood vessel | 5.62e-08 | 1 |
trunk blood vessel | 5.62e-08 | 1 |
liver parenchyma | 5.62e-08 | 1 |
liver lobule | 5.62e-08 | 1 |
biliary system | 5.62e-08 | 1 |
biliary tree | 5.62e-08 | 1 |
biliary bud | 5.62e-08 | 1 |
hepatic duct | 5.62e-08 | 1 |
skeletal muscle tissue | 1.61e-07 | 9 |
striated muscle tissue | 1.61e-07 | 9 |
muscle tissue | 1.61e-07 | 9 |
multilaminar epithelium | 1.61e-07 | 9 |
epithelial vesicle | 1.61e-07 | 9 |
musculature | 1.61e-07 | 9 |
somite | 1.61e-07 | 9 |
myotome | 1.61e-07 | 9 |
presomitic mesoderm | 1.61e-07 | 9 |
presumptive segmental plate | 1.61e-07 | 9 |
dermomyotome | 1.61e-07 | 9 |
trunk paraxial mesoderm | 1.61e-07 | 9 |
musculoskeletal system | 2.31e-07 | 32 |
musculature of body | 8.12e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.08e-21 | 3 |
muscle cancer | 2.08e-21 | 3 |
organ system cancer | 5.11e-11 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.