FFCP PHASE1:Mm9::chr12:109999540..109999552,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:109999540..109999552,-|id=chr12:109999540..109999552,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000355,3.44e-18,9|ontology_enrichment_disease=DOID:0060100!1.82e-16!3;DOID:4045!1.82e-16!3;DOID:0050686!1.75e-08!6|ontology_enrichment_disease_v019_2=DOID:0060100,1.65e-52,3;DOID:4045,1.65e-52,3;DOID:0050686,8.48e-27,6|ontology_enrichment_uberon=UBERON:0002204!4.71e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.44e-18,9;UBERON:0002036,3.44e-18,9;UBERON:0002385,3.44e-18,9;UBERON:0000486,3.44e-18,9;UBERON:0007503,3.44e-18,9;UBERON:0001015,3.44e-18,9;UBERON:0002329,3.44e-18,9;UBERON:0003082,3.44e-18,9;UBERON:0003059,3.44e-18,9;UBERON:0007282,3.44e-18,9;UBERON:0004290,3.44e-18,9;UBERON:0009618,3.44e-18,9;UBERON:0000383,1.84e-16,10;UBERON:0007524,4.78e-15,11;UBERON:0003077,4.78e-15,11;UBERON:0007285,4.78e-15,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.856003649656029,0.0874204024189974,0,0.202475267389826,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.393012183581,6.2506827561904,5.75876118371178,16.4704816648684,5.46436387966757,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:109999540..109999552,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:109999540..109999552,- | |||
|id=chr12:109999540..109999552,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,3.44e-18,9 | |||
|ontology_enrichment_disease=DOID:0060100!1.82e-16!3;DOID:4045!1.82e-16!3;DOID:0050686!1.75e-08!6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.65e-52,3;DOID:4045,1.65e-52,3;DOID:0050686,8.48e-27,6 | |||
|ontology_enrichment_uberon=UBERON:0002204!4.71e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.44e-18,9;UBERON:0002036,3.44e-18,9;UBERON:0002385,3.44e-18,9;UBERON:0000486,3.44e-18,9;UBERON:0007503,3.44e-18,9;UBERON:0001015,3.44e-18,9;UBERON:0002329,3.44e-18,9;UBERON:0003082,3.44e-18,9;UBERON:0003059,3.44e-18,9;UBERON:0007282,3.44e-18,9;UBERON:0004290,3.44e-18,9;UBERON:0009618,3.44e-18,9;UBERON:0000383,1.84e-16,10;UBERON:0007524,4.78e-15,11;UBERON:0003077,4.78e-15,11;UBERON:0007285,4.78e-15,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.856003649656029,0.0874204024189974,0,0.202475267389826,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.393012183581,6.2506827561904,5.75876118371178,16.4704816648684,5.46436387966757,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:109999540..109999552,- | |||
}} |
Revision as of 22:11, 12 September 2013
Short description: | p@chr12:109999540..109999552, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:109999540..109999552, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 3.44e-18 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 3.44e-18 | 9 |
striated muscle tissue | 3.44e-18 | 9 |
muscle tissue | 3.44e-18 | 9 |
multilaminar epithelium | 3.44e-18 | 9 |
epithelial vesicle | 3.44e-18 | 9 |
musculature | 3.44e-18 | 9 |
somite | 3.44e-18 | 9 |
myotome | 3.44e-18 | 9 |
presomitic mesoderm | 3.44e-18 | 9 |
presumptive segmental plate | 3.44e-18 | 9 |
dermomyotome | 3.44e-18 | 9 |
trunk paraxial mesoderm | 3.44e-18 | 9 |
musculature of body | 1.84e-16 | 10 |
dense mesenchyme tissue | 4.78e-15 | 11 |
paraxial mesoderm | 4.78e-15 | 11 |
presumptive paraxial mesoderm | 4.78e-15 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.65e-52 | 3 |
muscle cancer | 1.65e-52 | 3 |
organ system cancer | 8.48e-27 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.