Personal tools

FFCP PHASE1:Mm9::chr12:110797998..110798011,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=145|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:110797998..110798011,+|id=chr12:110797998..110798011,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.54e-17!71;UBERON:0003075!1.54e-17!71;UBERON:0007284!1.54e-17!71;UBERON:0001049!2.75e-17!52;UBERON:0005068!2.75e-17!52;UBERON:0006241!2.75e-17!52;UBERON:0007135!2.75e-17!52;UBERON:0000955!9.53e-16!50;UBERON:0006238!9.53e-16!50;UBERON:0002616!4.57e-15!49;UBERON:0000033!2.34e-14!63;UBERON:0003056!8.31e-14!49;UBERON:0003080!4.55e-13!40;UBERON:0002780!2.22e-12!39;UBERON:0001890!2.22e-12!39;UBERON:0006240!2.22e-12!39;UBERON:0002020!2.66e-12!34;UBERON:0001017!3.49e-12!73;UBERON:0005743!3.49e-12!73;UBERON:0004121!4.93e-12!102;UBERON:0000924!4.93e-12!102;UBERON:0006601!4.93e-12!102;UBERON:0000073!2.26e-11!75;UBERON:0001016!2.26e-11!75;UBERON:0002791!3.72e-10!29;UBERON:0003528!3.72e-10!29;UBERON:0001893!3.72e-10!29;UBERON:0002021!1.69e-09!10;UBERON:0000411!1.69e-09!10;UBERON:0001950!1.69e-09!10;UBERON:0002619!5.71e-07!17;UBERON:0000025!9.83e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.83e-28,54;UBERON:0002346,7.32e-28,64;UBERON:0003075,7.32e-28,64;UBERON:0007284,7.32e-28,64;UBERON:0001049,1.59e-27,52;UBERON:0005068,1.59e-27,52;UBERON:0006241,1.59e-27,52;UBERON:0007135,1.59e-27,52;UBERON:0000955,1.33e-26,47;UBERON:0006238,1.33e-26,47;UBERON:0002616,4.40e-25,46;UBERON:0001017,6.31e-24,73;UBERON:0010371,2.01e-23,73;UBERON:0001016,4.53e-23,75;UBERON:0003056,1.37e-22,49;UBERON:0004121,1.03e-21,95;UBERON:0000924,1.03e-21,95;UBERON:0006601,1.03e-21,95;UBERON:0002021,4.75e-21,10;UBERON:0000411,4.75e-21,10;UBERON:0001950,4.75e-21,10;UBERON:0003080,1.08e-20,40;UBERON:0002780,3.28e-19,39;UBERON:0001890,3.28e-19,39;UBERON:0006240,3.28e-19,39;UBERON:0002020,1.66e-18,34;UBERON:0010314,3.38e-18,92;UBERON:0003528,9.99e-18,29;UBERON:0002791,9.99e-18,29;UBERON:0001893,9.99e-18,29;UBERON:0002619,2.39e-16,17;UBERON:0000956,5.51e-15,21;UBERON:0001869,5.51e-15,21;UBERON:0000203,5.51e-15,21;UBERON:0000025,1.47e-09,114;UBERON:0004111,1.86e-08,122;UBERON:0003076,2.71e-07,12;UBERON:0003057,2.71e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,1.5869729378161,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0.441737081903227,0,0.287536413054709,0,0,2.55374676170375,2.61131106535614,0.263772575460388,0.548925861614458,0.52091337055676,0.558365998002762,1.12552522006336,7.48711414106369,3.24091444021034,2.13557521198654,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.445326417194474,0,0.608930956624282,0,0.904335843315735,1.52865319276416,0.376999773989026,0.988779870937496,0,0,0.808834249737046,0,0,0,3.22058876712702,2.09446706813455,0,0,0,0,3.14560342750128,2.74500361691176,2.63874139437015,2.9550134432687,7.67146371990992,2.0778804455956,5.19172041816825,0.509196819251581,0,0,0.210441855886474,0,0,0,1.65775299619287,1.2246569847239,1.2811372028485,0.281105173679186,1.29351685369508,0,0.378212160335639,0,0,0,0,0.411564272815887,0,0,0,0,0,0.234526059981096,0,0,0.393528463494808,0.771335564436891,0.232533944750408,0,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0,0,3.15434922846191,1.54356918568927,0,0,0.426576501070468,0.696710015581316,0,0.201683524623343,0.22237804384487,0,0,0,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0,0,0.571242563048644,0,0,0,0.210407459670956,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0.274561413188081,5.75072826109418,0.372140947668503,0.312037673114561,0,0,0,0,0,0.325929952884052,0.339490171550376,0.469380496577004,0.502518772325447,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,1.44495530989013,2.22702204525186,0,0,0,0,0,0,0,0.283076530788832,0,0,0,2.57057053137446,0,0,0.325773918707152,0,0,0.485561272309963,0,1.13163047853539,0,0.307435147943927,0.258428293168221,1.09060118843252,0,0,0,0,1.36175842301515,0.720244376125241,0.129358683782755,0.214337035031592,0,2.14042581122485,0.658196082408484,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0.291480836629851,1.66882771809459,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.432021363287205,0.627264888043406,0.218362563746178,0.269728692769641,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0,0,0.129159823477731,0.844780627453891,0.234714477291508,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,6.21227026878773,3.68260189205742,6.87474616127276,4.64003592327956,1.37016503954128,6.7985450765073,4.72515750162264,3.60256962579376,4.07828168085784,5.69536342927002,0.31136204275253,0.399024873401031,0.170733605754134,0.486213434136588,0.419226325255965,0,0.666740183404846,0.412070114477788,0,0.505394423527595,0.50695859978048,0.565879024158229,0.37456602987953,0.320125762024346,0.631790158511746,0,0.231768651889711,0.77163688185482,0.824171801606613,0.735994600671987,1.02860775715625,1.95223386775271,0.953744759789284,0.290692833264657,0.376437521661322,0.507687647350059,0.73171189149109,1.31534855718921,0.407412341537585,0.561142271657738,0.237270036248348,1.57607171800902,0.818462086339379,0.154936841185966,0.192906610981141,0.499621155875892,0,0,0.382576664137687,0,0|short_description=p@chr12:110797998..110798011,+}}
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=145
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr12:110797998..110798011,+
|id=chr12:110797998..110798011,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.54e-17!71;UBERON:0003075!1.54e-17!71;UBERON:0007284!1.54e-17!71;UBERON:0001049!2.75e-17!52;UBERON:0005068!2.75e-17!52;UBERON:0006241!2.75e-17!52;UBERON:0007135!2.75e-17!52;UBERON:0000955!9.53e-16!50;UBERON:0006238!9.53e-16!50;UBERON:0002616!4.57e-15!49;UBERON:0000033!2.34e-14!63;UBERON:0003056!8.31e-14!49;UBERON:0003080!4.55e-13!40;UBERON:0002780!2.22e-12!39;UBERON:0001890!2.22e-12!39;UBERON:0006240!2.22e-12!39;UBERON:0002020!2.66e-12!34;UBERON:0001017!3.49e-12!73;UBERON:0005743!3.49e-12!73;UBERON:0004121!4.93e-12!102;UBERON:0000924!4.93e-12!102;UBERON:0006601!4.93e-12!102;UBERON:0000073!2.26e-11!75;UBERON:0001016!2.26e-11!75;UBERON:0002791!3.72e-10!29;UBERON:0003528!3.72e-10!29;UBERON:0001893!3.72e-10!29;UBERON:0002021!1.69e-09!10;UBERON:0000411!1.69e-09!10;UBERON:0001950!1.69e-09!10;UBERON:0002619!5.71e-07!17;UBERON:0000025!9.83e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.83e-28,54;UBERON:0002346,7.32e-28,64;UBERON:0003075,7.32e-28,64;UBERON:0007284,7.32e-28,64;UBERON:0001049,1.59e-27,52;UBERON:0005068,1.59e-27,52;UBERON:0006241,1.59e-27,52;UBERON:0007135,1.59e-27,52;UBERON:0000955,1.33e-26,47;UBERON:0006238,1.33e-26,47;UBERON:0002616,4.40e-25,46;UBERON:0001017,6.31e-24,73;UBERON:0010371,2.01e-23,73;UBERON:0001016,4.53e-23,75;UBERON:0003056,1.37e-22,49;UBERON:0004121,1.03e-21,95;UBERON:0000924,1.03e-21,95;UBERON:0006601,1.03e-21,95;UBERON:0002021,4.75e-21,10;UBERON:0000411,4.75e-21,10;UBERON:0001950,4.75e-21,10;UBERON:0003080,1.08e-20,40;UBERON:0002780,3.28e-19,39;UBERON:0001890,3.28e-19,39;UBERON:0006240,3.28e-19,39;UBERON:0002020,1.66e-18,34;UBERON:0010314,3.38e-18,92;UBERON:0003528,9.99e-18,29;UBERON:0002791,9.99e-18,29;UBERON:0001893,9.99e-18,29;UBERON:0002619,2.39e-16,17;UBERON:0000956,5.51e-15,21;UBERON:0001869,5.51e-15,21;UBERON:0000203,5.51e-15,21;UBERON:0000025,1.47e-09,114;UBERON:0004111,1.86e-08,122;UBERON:0003076,2.71e-07,12;UBERON:0003057,2.71e-07,12
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,1.5869729378161,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0.441737081903227,0,0.287536413054709,0,0,2.55374676170375,2.61131106535614,0.263772575460388,0.548925861614458,0.52091337055676,0.558365998002762,1.12552522006336,7.48711414106369,3.24091444021034,2.13557521198654,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.445326417194474,0,0.608930956624282,0,0.904335843315735,1.52865319276416,0.376999773989026,0.988779870937496,0,0,0.808834249737046,0,0,0,3.22058876712702,2.09446706813455,0,0,0,0,3.14560342750128,2.74500361691176,2.63874139437015,2.9550134432687,7.67146371990992,2.0778804455956,5.19172041816825,0.509196819251581,0,0,0.210441855886474,0,0,0,1.65775299619287,1.2246569847239,1.2811372028485,0.281105173679186,1.29351685369508,0,0.378212160335639,0,0,0,0,0.411564272815887,0,0,0,0,0,0.234526059981096,0,0,0.393528463494808,0.771335564436891,0.232533944750408,0,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0,0,3.15434922846191,1.54356918568927,0,0,0.426576501070468,0.696710015581316,0,0.201683524623343,0.22237804384487,0,0,0,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0,0,0.571242563048644,0,0,0,0.210407459670956,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0.274561413188081,5.75072826109418,0.372140947668503,0.312037673114561,0,0,0,0,0,0.325929952884052,0.339490171550376,0.469380496577004,0.502518772325447,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,1.44495530989013,2.22702204525186,0,0,0,0,0,0,0,0.283076530788832,0,0,0,2.57057053137446,0,0,0.325773918707152,0,0,0.485561272309963,0,1.13163047853539,0,0.307435147943927,0.258428293168221,1.09060118843252,0,0,0,0,1.36175842301515,0.720244376125241,0.129358683782755,0.214337035031592,0,2.14042581122485,0.658196082408484,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0.291480836629851,1.66882771809459,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.432021363287205,0.627264888043406,0.218362563746178,0.269728692769641,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0,0,0.129159823477731,0.844780627453891,0.234714477291508,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,6.21227026878773,3.68260189205742,6.87474616127276,4.64003592327956,1.37016503954128,6.7985450765073,4.72515750162264,3.60256962579376,4.07828168085784,5.69536342927002,0.31136204275253,0.399024873401031,0.170733605754134,0.486213434136588,0.419226325255965,0,0.666740183404846,0.412070114477788,0,0.505394423527595,0.50695859978048,0.565879024158229,0.37456602987953,0.320125762024346,0.631790158511746,0,0.231768651889711,0.77163688185482,0.824171801606613,0.735994600671987,1.02860775715625,1.95223386775271,0.953744759789284,0.290692833264657,0.376437521661322,0.507687647350059,0.73171189149109,1.31534855718921,0.407412341537585,0.561142271657738,0.237270036248348,1.57607171800902,0.818462086339379,0.154936841185966,0.192906610981141,0.499621155875892,0,0,0.382576664137687,0,0
|short_description=p@chr12:110797998..110798011,+
}}

Revision as of 22:14, 12 September 2013

Short description:p@chr12:110797998..110798011, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr12:110797998..110798011, +
Coexpression cluster:MCL_coexpression_mm9:145
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr12:110797998..110798011+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.49
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F27.67
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B25.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C61.22
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G11.54
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.64
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.83e-2854
neurectoderm7.32e-2864
neural plate7.32e-2864
presumptive neural plate7.32e-2864
neural tube1.59e-2752
neural rod1.59e-2752
future spinal cord1.59e-2752
neural keel1.59e-2752
brain1.33e-2647
future brain1.33e-2647
regional part of brain4.40e-2546
central nervous system6.31e-2473
ecto-epithelium2.01e-2373
nervous system4.53e-2375
pre-chordal neural plate1.37e-2249
ectoderm-derived structure1.03e-2195
ectoderm1.03e-2195
presumptive ectoderm1.03e-2195
occipital lobe4.75e-2110
visual cortex4.75e-2110
neocortex4.75e-2110
anterior neural tube1.08e-2040
regional part of forebrain3.28e-1939
forebrain3.28e-1939
future forebrain3.28e-1939
gray matter1.66e-1834
structure with developmental contribution from neural crest3.38e-1892
brain grey matter9.99e-1829
regional part of telencephalon9.99e-1829
telencephalon9.99e-1829
regional part of cerebral cortex2.39e-1617
cerebral cortex5.51e-1521
cerebral hemisphere5.51e-1521
pallium5.51e-1521
tube1.47e-09114
anatomical conduit1.86e-08122
posterior neural tube2.71e-0712
chordal neural plate2.71e-0712







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr12:110797998..110798011,%2B&oldid=2900981"