FFCP PHASE1:Mm9::chr12:16539468..16539477,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:16539468..16539477,+|id=chr12:16539468..16539477,+|ontology_enrichment_celltype=CL:0000838!9.29e-13!12;CL:0000988!8.38e-12!32;CL:0002032!8.38e-12!32;CL:0000037!8.38e-12!32;CL:0000566!8.38e-12!32;CL:0000837!8.38e-12!32;CL:0000542!1.34e-11!13;CL:0000051!1.34e-11!13;CL:0000791!1.74e-11!9;CL:0000789!1.74e-11!9;CL:0002420!1.74e-11!9;CL:0002419!1.74e-11!9;CL:0000790!1.74e-11!9;CL:0000084!3.26e-11!11;CL:0000827!3.26e-11!11;CL:0000624!6.07e-10!8;CL:0000893!7.56e-10!6;CL:0002489!7.56e-10!6;CL:0000898!7.56e-10!6;CL:0000809!7.56e-10!6;CL:0000810!7.56e-10!6;CL:0000895!7.56e-10!6;CL:0000808!7.56e-10!6;CL:0000894!7.56e-10!6;CL:0000806!7.56e-10!6;CL:0000807!7.56e-10!6;CL:0000805!7.56e-10!6;CL:0002425!7.56e-10!6;CL:0002436!7.56e-10!6;CL:0002427!7.56e-10!6;CL:0002428!7.56e-10!6;CL:0002429!7.56e-10!6;CL:0002433!7.56e-10!6;CL:0002431!7.56e-10!6;CL:0002432!7.56e-10!6;CL:0002320!5.51e-09!46;CL:0000134!5.51e-09!46;CL:0000219!8.71e-09!54;CL:0000738!2.41e-08!17;CL:0002087!2.41e-08!17;CL:0002031!3.37e-07!25|ontology_enrichment_celltype_v019_2=CL:0000838,7.96e-14,12;CL:0000624,1.13e-13,8;CL:0000542,9.15e-13,13;CL:0000051,9.15e-13,13;CL:0000791,3.47e-12,9;CL:0000789,3.47e-12,9;CL:0002420,3.47e-12,9;CL:0002419,3.47e-12,9;CL:0000790,3.47e-12,9;CL:0000893,1.19e-10,6;CL:0002489,1.19e-10,6;CL:0000898,1.19e-10,6;CL:0000809,1.19e-10,6;CL:0000810,1.19e-10,6;CL:0000895,1.19e-10,6;CL:0000808,1.19e-10,6;CL:0000894,1.19e-10,6;CL:0000806,1.19e-10,6;CL:0000807,1.19e-10,6;CL:0000805,1.19e-10,6;CL:0002425,1.19e-10,6;CL:0002436,1.19e-10,6;CL:0002427,1.19e-10,6;CL:0002428,1.19e-10,6;CL:0002429,1.19e-10,6;CL:0002433,1.19e-10,6;CL:0002431,1.19e-10,6;CL:0002432,1.19e-10,6;CL:0000084,5.07e-10,11;CL:0000827,5.07e-10,11;CL:0000738,9.21e-10,17;CL:0002087,9.21e-10,17;CL:0000988,1.21e-09,32;CL:0002032,1.21e-09,32;CL:0000037,1.21e-09,32;CL:0000837,1.21e-09,32;CL:0000945,1.05e-07,1;CL:0000236,1.05e-07,1;CL:0000826,1.05e-07,1;CL:0000355,1.45e-07,9|ontology_enrichment_disease=DOID:0060100!5.79e-07!3;DOID:4045!5.79e-07!3|ontology_enrichment_disease_v019_2=DOID:0060100,1.52e-21,3;DOID:4045,1.52e-21,3;DOID:0050686,4.37e-11,6|ontology_enrichment_uberon=UBERON:0000072!2.08e-11!27;UBERON:0002193!6.07e-11!48;UBERON:0002370!2.59e-10!23;UBERON:0000974!2.59e-10!23;UBERON:0004807!2.59e-10!23;UBERON:0005058!2.59e-10!23;UBERON:0003351!2.59e-10!23;UBERON:0009113!2.59e-10!23;UBERON:0003295!2.59e-10!23;UBERON:0009722!2.59e-10!23;UBERON:0005562!2.59e-10!23;UBERON:0007690!2.59e-10!23;UBERON:0004177!2.67e-10!29;UBERON:0006562!9.50e-10!24;UBERON:0003408!9.50e-10!24;UBERON:0001557!9.50e-10!24;UBERON:0001042!9.50e-10!24;UBERON:0008814!9.50e-10!24;UBERON:0009145!9.50e-10!24;UBERON:0002390!1.96e-09!45;UBERON:0003061!1.96e-09!45;UBERON:0000063!3.60e-09!35;UBERON:0002384!5.51e-09!46|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.45e-07,9;UBERON:0002036,1.45e-07,9;UBERON:0002385,1.45e-07,9;UBERON:0000486,1.45e-07,9;UBERON:0007503,1.45e-07,9;UBERON:0001015,1.45e-07,9;UBERON:0002329,1.45e-07,9;UBERON:0003082,1.45e-07,9;UBERON:0003059,1.45e-07,9;UBERON:0007282,1.45e-07,9;UBERON:0004290,1.45e-07,9;UBERON:0009618,1.45e-07,9;UBERON:0000383,7.41e-07,10|phase1_expression=0,0,0,0,0,0,0,0,4.36445038670167,1.40438715793196,1.88339765048055,0.0797721589953364,0.171200729931206,0.0874204024189974,0,0,0,0.157731082679119,0.137114433605739,0,0,0.0992909512008853,0,0.47997726838022,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9042019680025,7.813353445238,5.23523743973798,37.6468152339849,12.294818729252,12.1377588257788,0.125896817975577,0,0,0,0.218025156380447,0,0,0,0,1.00669563634642,1.45072428402269,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0,0,0,0,0.432982082022428,0.253359865475099,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,1.19980546198682,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378212160335639,0,0,0,0,0,0,1.40442637462647,0.772043721344145,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0.188368457004691,0,0,0.509935289981566,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576060012515731,0,0,0.102710957164827,0,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.194915761479505,0,0.233753804363138,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:16539468..16539477,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:16539468..16539477,+ | |||
|id=chr12:16539468..16539477,+ | |||
|ontology_enrichment_celltype=CL:0000838!9.29e-13!12;CL:0000988!8.38e-12!32;CL:0002032!8.38e-12!32;CL:0000037!8.38e-12!32;CL:0000566!8.38e-12!32;CL:0000837!8.38e-12!32;CL:0000542!1.34e-11!13;CL:0000051!1.34e-11!13;CL:0000791!1.74e-11!9;CL:0000789!1.74e-11!9;CL:0002420!1.74e-11!9;CL:0002419!1.74e-11!9;CL:0000790!1.74e-11!9;CL:0000084!3.26e-11!11;CL:0000827!3.26e-11!11;CL:0000624!6.07e-10!8;CL:0000893!7.56e-10!6;CL:0002489!7.56e-10!6;CL:0000898!7.56e-10!6;CL:0000809!7.56e-10!6;CL:0000810!7.56e-10!6;CL:0000895!7.56e-10!6;CL:0000808!7.56e-10!6;CL:0000894!7.56e-10!6;CL:0000806!7.56e-10!6;CL:0000807!7.56e-10!6;CL:0000805!7.56e-10!6;CL:0002425!7.56e-10!6;CL:0002436!7.56e-10!6;CL:0002427!7.56e-10!6;CL:0002428!7.56e-10!6;CL:0002429!7.56e-10!6;CL:0002433!7.56e-10!6;CL:0002431!7.56e-10!6;CL:0002432!7.56e-10!6;CL:0002320!5.51e-09!46;CL:0000134!5.51e-09!46;CL:0000219!8.71e-09!54;CL:0000738!2.41e-08!17;CL:0002087!2.41e-08!17;CL:0002031!3.37e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,7.96e-14,12;CL:0000624,1.13e-13,8;CL:0000542,9.15e-13,13;CL:0000051,9.15e-13,13;CL:0000791,3.47e-12,9;CL:0000789,3.47e-12,9;CL:0002420,3.47e-12,9;CL:0002419,3.47e-12,9;CL:0000790,3.47e-12,9;CL:0000893,1.19e-10,6;CL:0002489,1.19e-10,6;CL:0000898,1.19e-10,6;CL:0000809,1.19e-10,6;CL:0000810,1.19e-10,6;CL:0000895,1.19e-10,6;CL:0000808,1.19e-10,6;CL:0000894,1.19e-10,6;CL:0000806,1.19e-10,6;CL:0000807,1.19e-10,6;CL:0000805,1.19e-10,6;CL:0002425,1.19e-10,6;CL:0002436,1.19e-10,6;CL:0002427,1.19e-10,6;CL:0002428,1.19e-10,6;CL:0002429,1.19e-10,6;CL:0002433,1.19e-10,6;CL:0002431,1.19e-10,6;CL:0002432,1.19e-10,6;CL:0000084,5.07e-10,11;CL:0000827,5.07e-10,11;CL:0000738,9.21e-10,17;CL:0002087,9.21e-10,17;CL:0000988,1.21e-09,32;CL:0002032,1.21e-09,32;CL:0000037,1.21e-09,32;CL:0000837,1.21e-09,32;CL:0000945,1.05e-07,1;CL:0000236,1.05e-07,1;CL:0000826,1.05e-07,1;CL:0000355,1.45e-07,9 | |||
|ontology_enrichment_disease=DOID:0060100!5.79e-07!3;DOID:4045!5.79e-07!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.52e-21,3;DOID:4045,1.52e-21,3;DOID:0050686,4.37e-11,6 | |||
|ontology_enrichment_uberon=UBERON:0000072!2.08e-11!27;UBERON:0002193!6.07e-11!48;UBERON:0002370!2.59e-10!23;UBERON:0000974!2.59e-10!23;UBERON:0004807!2.59e-10!23;UBERON:0005058!2.59e-10!23;UBERON:0003351!2.59e-10!23;UBERON:0009113!2.59e-10!23;UBERON:0003295!2.59e-10!23;UBERON:0009722!2.59e-10!23;UBERON:0005562!2.59e-10!23;UBERON:0007690!2.59e-10!23;UBERON:0004177!2.67e-10!29;UBERON:0006562!9.50e-10!24;UBERON:0003408!9.50e-10!24;UBERON:0001557!9.50e-10!24;UBERON:0001042!9.50e-10!24;UBERON:0008814!9.50e-10!24;UBERON:0009145!9.50e-10!24;UBERON:0002390!1.96e-09!45;UBERON:0003061!1.96e-09!45;UBERON:0000063!3.60e-09!35;UBERON:0002384!5.51e-09!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.45e-07,9;UBERON:0002036,1.45e-07,9;UBERON:0002385,1.45e-07,9;UBERON:0000486,1.45e-07,9;UBERON:0007503,1.45e-07,9;UBERON:0001015,1.45e-07,9;UBERON:0002329,1.45e-07,9;UBERON:0003082,1.45e-07,9;UBERON:0003059,1.45e-07,9;UBERON:0007282,1.45e-07,9;UBERON:0004290,1.45e-07,9;UBERON:0009618,1.45e-07,9;UBERON:0000383,7.41e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,4.36445038670167,1.40438715793196,1.88339765048055,0.0797721589953364,0.171200729931206,0.0874204024189974,0,0,0,0.157731082679119,0.137114433605739,0,0,0.0992909512008853,0,0.47997726838022,0,0,0,0,0,0,0,0,0,0,0,0,0,15.9042019680025,7.813353445238,5.23523743973798,37.6468152339849,12.294818729252,12.1377588257788,0.125896817975577,0,0,0,0.218025156380447,0,0,0,0,1.00669563634642,1.45072428402269,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0,0,0,0,0.432982082022428,0.253359865475099,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,1.19980546198682,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378212160335639,0,0,0,0,0,0,1.40442637462647,0.772043721344145,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0.188368457004691,0,0,0.509935289981566,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576060012515731,0,0,0.102710957164827,0,0.179026695667481,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.194915761479505,0,0.233753804363138,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:16539468..16539477,+ | |||
}} |
Revision as of 22:33, 12 September 2013
Short description: | p@chr12:16539468..16539477, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:16539468..16539477, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.45e-07 | 9 |
striated muscle tissue | 1.45e-07 | 9 |
muscle tissue | 1.45e-07 | 9 |
multilaminar epithelium | 1.45e-07 | 9 |
epithelial vesicle | 1.45e-07 | 9 |
musculature | 1.45e-07 | 9 |
somite | 1.45e-07 | 9 |
myotome | 1.45e-07 | 9 |
presomitic mesoderm | 1.45e-07 | 9 |
presumptive segmental plate | 1.45e-07 | 9 |
dermomyotome | 1.45e-07 | 9 |
trunk paraxial mesoderm | 1.45e-07 | 9 |
musculature of body | 7.41e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.52e-21 | 3 |
muscle cancer | 1.52e-21 | 3 |
organ system cancer | 4.37e-11 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.