FFCP PHASE1:Mm9::chr14:122883672..122883679,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=30|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:122883672..122883679,+|id=chr14:122883672..122883679,+|ontology_enrichment_celltype=CL:0002613!2.66e-19!3;CL:0000117!1.91e-09!23;CL:0000337!1.91e-09!23;CL:0000540!1.04e-08!33;CL:0000047!1.04e-08!33;CL:0000031!1.04e-08!33;CL:0000404!1.04e-08!33;CL:0000006!1.53e-07!1;CL:0002374!1.53e-07!1;CL:0000202!1.53e-07!1;CL:0000199!1.53e-07!1;CL:0000855!1.53e-07!1;CL:0000589!1.53e-07!1;CL:0000393!2.81e-07!39;CL:0000211!2.81e-07!39|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000369!1.81e-20!5;UBERON:0002435!1.81e-20!5;UBERON:0000204!1.81e-20!5;UBERON:0010082!1.81e-20!5;UBERON:0002420!9.08e-20!8;UBERON:0007245!9.08e-20!8;UBERON:0010009!9.08e-20!8;UBERON:0010011!9.08e-20!8;UBERON:0000454!9.08e-20!8;UBERON:0000955!5.86e-17!50;UBERON:0006238!5.86e-17!50;UBERON:0000033!1.24e-15!63;UBERON:0002616!2.06e-14!49;UBERON:0001017!2.66e-13!73;UBERON:0005743!2.66e-13!73;UBERON:0002791!4.59e-13!29;UBERON:0003528!4.59e-13!29;UBERON:0001893!4.59e-13!29;UBERON:0000073!6.55e-13!75;UBERON:0001016!6.55e-13!75;UBERON:0001049!4.06e-11!52;UBERON:0005068!4.06e-11!52;UBERON:0006241!4.06e-11!52;UBERON:0007135!4.06e-11!52;UBERON:0007811!4.47e-11!86;UBERON:0002020!4.92e-11!34;UBERON:0000153!5.22e-10!94;UBERON:0002780!1.60e-09!39;UBERON:0001890!1.60e-09!39;UBERON:0006240!1.60e-09!39;UBERON:0003080!2.90e-09!40;UBERON:0004121!4.17e-09!102;UBERON:0000924!4.17e-09!102;UBERON:0006601!4.17e-09!102;UBERON:0002346!7.87e-08!71;UBERON:0003075!7.87e-08!71;UBERON:0007284!7.87e-08!71;UBERON:0002037!1.24e-07!4;UBERON:0002680!1.24e-07!4;UBERON:0001895!1.24e-07!4;UBERON:0010092!1.24e-07!4;UBERON:0006215!1.24e-07!4;UBERON:0003056!2.05e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.54e-44,4;UBERON:0002680,4.54e-44,4;UBERON:0001895,4.54e-44,4;UBERON:0010092,4.54e-44,4;UBERON:0006215,4.54e-44,4;UBERON:0004733,6.66e-30,6;UBERON:0004732,6.66e-30,6;UBERON:0002028,6.66e-30,6;UBERON:0007277,6.66e-30,6;UBERON:0003076,1.13e-15,12;UBERON:0003057,1.13e-15,12|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0.52091337055676,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.5628351432194,7.74952815209784,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr14:122883672..122883679,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:122883672..122883679,+ | |||
|id=chr14:122883672..122883679,+ | |||
|ontology_enrichment_celltype=CL:0002613!2.66e-19!3;CL:0000117!1.91e-09!23;CL:0000337!1.91e-09!23;CL:0000540!1.04e-08!33;CL:0000047!1.04e-08!33;CL:0000031!1.04e-08!33;CL:0000404!1.04e-08!33;CL:0000006!1.53e-07!1;CL:0002374!1.53e-07!1;CL:0000202!1.53e-07!1;CL:0000199!1.53e-07!1;CL:0000855!1.53e-07!1;CL:0000589!1.53e-07!1;CL:0000393!2.81e-07!39;CL:0000211!2.81e-07!39 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000369!1.81e-20!5;UBERON:0002435!1.81e-20!5;UBERON:0000204!1.81e-20!5;UBERON:0010082!1.81e-20!5;UBERON:0002420!9.08e-20!8;UBERON:0007245!9.08e-20!8;UBERON:0010009!9.08e-20!8;UBERON:0010011!9.08e-20!8;UBERON:0000454!9.08e-20!8;UBERON:0000955!5.86e-17!50;UBERON:0006238!5.86e-17!50;UBERON:0000033!1.24e-15!63;UBERON:0002616!2.06e-14!49;UBERON:0001017!2.66e-13!73;UBERON:0005743!2.66e-13!73;UBERON:0002791!4.59e-13!29;UBERON:0003528!4.59e-13!29;UBERON:0001893!4.59e-13!29;UBERON:0000073!6.55e-13!75;UBERON:0001016!6.55e-13!75;UBERON:0001049!4.06e-11!52;UBERON:0005068!4.06e-11!52;UBERON:0006241!4.06e-11!52;UBERON:0007135!4.06e-11!52;UBERON:0007811!4.47e-11!86;UBERON:0002020!4.92e-11!34;UBERON:0000153!5.22e-10!94;UBERON:0002780!1.60e-09!39;UBERON:0001890!1.60e-09!39;UBERON:0006240!1.60e-09!39;UBERON:0003080!2.90e-09!40;UBERON:0004121!4.17e-09!102;UBERON:0000924!4.17e-09!102;UBERON:0006601!4.17e-09!102;UBERON:0002346!7.87e-08!71;UBERON:0003075!7.87e-08!71;UBERON:0007284!7.87e-08!71;UBERON:0002037!1.24e-07!4;UBERON:0002680!1.24e-07!4;UBERON:0001895!1.24e-07!4;UBERON:0010092!1.24e-07!4;UBERON:0006215!1.24e-07!4;UBERON:0003056!2.05e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.54e-44,4;UBERON:0002680,4.54e-44,4;UBERON:0001895,4.54e-44,4;UBERON:0010092,4.54e-44,4;UBERON:0006215,4.54e-44,4;UBERON:0004733,6.66e-30,6;UBERON:0004732,6.66e-30,6;UBERON:0002028,6.66e-30,6;UBERON:0007277,6.66e-30,6;UBERON:0003076,1.13e-15,12;UBERON:0003057,1.13e-15,12 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0.52091337055676,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.5628351432194,7.74952815209784,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:122883672..122883679,+ | |||
}} |
Revision as of 01:38, 13 September 2013
Short description: | p@chr14:122883672..122883679, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:122883672..122883679, + |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 4.54e-44 | 4 |
regional part of metencephalon | 4.54e-44 | 4 |
metencephalon | 4.54e-44 | 4 |
future metencephalon | 4.54e-44 | 4 |
rhombic lip | 4.54e-44 | 4 |
segmental subdivision of hindbrain | 6.66e-30 | 6 |
segmental subdivision of nervous system | 6.66e-30 | 6 |
hindbrain | 6.66e-30 | 6 |
presumptive hindbrain | 6.66e-30 | 6 |
posterior neural tube | 1.13e-15 | 12 |
chordal neural plate | 1.13e-15 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.