FFCP PHASE1:Hg19::chr4:109088814..109088831,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51176|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6551|TSSclassifier=S|UniProt=|association_with_transcript=-64bp_to_ENST00000504775_5end|coexpression_cluster_id=C921|description=CAGE_peak_18_at_LEF1_5end|id=chr4:109088814..109088831,-|ontology_enrichment_celltype=CL:0000084!1.38e-14!25;CL:0000827!1.38e-14!25;CL:0000791!4.88e-14!18;CL:0000789!4.88e-14!18;CL:0002420!4.88e-14!18;CL:0002419!4.88e-14!18;CL:0000790!4.88e-14!18;CL:0000542!5.74e-11!53;CL:0000051!5.74e-11!53;CL:0002087!7.41e-11!119;CL:0000838!1.85e-10!52;CL:0000738!2.00e-10!140;CL:0000625!8.90e-10!11;CL:0000037!4.06e-09!172;CL:0000566!4.06e-09!172;CL:0000988!1.88e-08!182;CL:0002031!2.11e-08!124;CL:0002032!3.06e-08!165;CL:0000837!3.06e-08!165;CL:0000624!4.18e-07!6|ontology_enrichment_celltype_v019=CL:0000084;1.66e-27;25!CL:0000791;1.73e-21;18!CL:0000789;1.73e-21;18!CL:0002419;1.73e-21;18!CL:0000624;9.06e-14;6!CL:0000625;1.48e-11;11!CL:0000815;2.53e-11;2!CL:0000792;2.53e-11;2!CL:0002677;2.53e-11;2!CL:0000898;7.90e-08;3!CL:0000542;2.79e-07;53|ontology_enrichment_celltype_v019_2=CL:0000084,1.13e-27,25;CL:0000827,1.13e-27,25;CL:0000791,1.11e-21,18;CL:0000789,1.11e-21,18;CL:0002420,1.11e-21,18;CL:0002419,1.11e-21,18;CL:0000790,1.11e-21,18;CL:0000838,2.69e-14,52;CL:0000542,5.62e-14,53;CL:0000051,5.62e-14,53;CL:0000624,7.17e-14,6;CL:0000625,1.16e-11,11;CL:0000815,2.67e-11,2;CL:0000792,2.67e-11,2;CL:0002677,2.67e-11,2;CL:0000898,8.19e-08,3|ontology_enrichment_development_v019=CL:0000790;1.73e-21;18!CL:0000051;2.79e-07;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002370;3.43e-12;2!UBERON:0005058;3.43e-12;2!UBERON:0009113;3.43e-12;2|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0.393364276848904,0.383829398097213,0,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,0.217010870715852,0,0.647787332037959,0,0.145398238779565,0.377875943688809,0,0,0,0.309706370895104,0,0,0.709446689665756,0,0,0,0.376484679085209,0,0.224723484445085,0.918251677112708,0,0.639337125799041,0,0.199463657621632,0,0,0.56738522469114,0,0.251248665256743,0,0,0,0,0,0.422510572623884,0.637812899895131,0.209658645508376,0,0,0,0,0.59675003159727,0.182664153764634,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0.263384084775077,0.786839080455332,1.96505381374582,1.43921049299656,0.501559486172034,1.62961133316795,1.89379122293893,3.89653456815823,0,2.06224135232386,1.77227115666897,2.70803863765016,0,0,1.15106533222573,0.276350017785848,0,2.22429844743091,2.40786745280742,4.18142095219907,0.566546713487831,0.383220493601921,2.74901956386104,3.54227568827304,1.91139248594458,3.25541726928209,0.950452044448374,0.752875595388864,0.895906278080929,0,2.36777252044017,1.64225599384209,0.80642697289893,0.802320587350522,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0.234817388471643,0,0,0.190254152234598,0,0,0.492434012174795,0,0.148631162288728,0,0.16798212819886,0.141775097242386,0,0.290633938513962,0,0,0,0.207328115540772,0,0.12624243342638,0.063497894292169,0.381988425558278,0,0,0.514137463516618,0.300343057843917,0.571652865261156,0,0.87192013766656,0.22001485746285,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0.239624855491583,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.206768026122887,1.07857100409308,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.183138929636687,0.165018999841176,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0.0852266274161009,0.178064071293475,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0,0,1.58510321173008,0,0,0,1.05650146756755,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0.329294892959902,0.379473173765715,0,0,0,0,0,0.43050537267123,0,0,0,0.507447609232169,0,0,0.714695326373367,0.411362273086194,0,0.540031437238115,0,0,0,0,0.371606350251437,2.8853842595289,4.5530779742985,2.23196781820351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,1.4098700508785,0,0.293016358543788,0,0,0,0,0,0,0,0.281338832821026,0.111308705022906,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0.17902117467560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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51176 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6551 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-64bp_to_ENST00000504775_5end | |||
|coexpression_cluster_id=C921 | |||
|description=CAGE_peak_18_at_LEF1_5end | |||
|id=chr4:109088814..109088831,- | |||
|ontology_enrichment_celltype=CL:0000084!1.38e-14!25;CL:0000827!1.38e-14!25;CL:0000791!4.88e-14!18;CL:0000789!4.88e-14!18;CL:0002420!4.88e-14!18;CL:0002419!4.88e-14!18;CL:0000790!4.88e-14!18;CL:0000542!5.74e-11!53;CL:0000051!5.74e-11!53;CL:0002087!7.41e-11!119;CL:0000838!1.85e-10!52;CL:0000738!2.00e-10!140;CL:0000625!8.90e-10!11;CL:0000037!4.06e-09!172;CL:0000566!4.06e-09!172;CL:0000988!1.88e-08!182;CL:0002031!2.11e-08!124;CL:0002032!3.06e-08!165;CL:0000837!3.06e-08!165;CL:0000624!4.18e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.66e-27;25!CL:0000791;1.73e-21;18!CL:0000789;1.73e-21;18!CL:0002419;1.73e-21;18!CL:0000624;9.06e-14;6!CL:0000625;1.48e-11;11!CL:0000815;2.53e-11;2!CL:0000792;2.53e-11;2!CL:0002677;2.53e-11;2!CL:0000898;7.90e-08;3!CL:0000542;2.79e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.13e-27,25;CL:0000827,1.13e-27,25;CL:0000791,1.11e-21,18;CL:0000789,1.11e-21,18;CL:0002420,1.11e-21,18;CL:0002419,1.11e-21,18;CL:0000790,1.11e-21,18;CL:0000838,2.69e-14,52;CL:0000542,5.62e-14,53;CL:0000051,5.62e-14,53;CL:0000624,7.17e-14,6;CL:0000625,1.16e-11,11;CL:0000815,2.67e-11,2;CL:0000792,2.67e-11,2;CL:0002677,2.67e-11,2;CL:0000898,8.19e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.73e-21;18!CL:0000051;2.79e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.43e-12;2!UBERON:0005058;3.43e-12;2!UBERON:0009113;3.43e-12;2 | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p18@LEF1 | |||
}} |
Revision as of 01:59, 13 September 2013
Short description: | p18@LEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_LEF1_5end |
Coexpression cluster: | C921_chronic_thymus_CD4_acute_CD8_Hodgkin_Peripheral |
Association with transcript: | -64bp_to_ENST00000504775_5end |
EntrezGene: | LEF1 |
HGNC: | 6551 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.13e-27 | 25 |
pro-T cell | 1.13e-27 | 25 |
mature alpha-beta T cell | 1.11e-21 | 18 |
alpha-beta T cell | 1.11e-21 | 18 |
immature T cell | 1.11e-21 | 18 |
mature T cell | 1.11e-21 | 18 |
immature alpha-beta T cell | 1.11e-21 | 18 |
lymphoid lineage restricted progenitor cell | 2.69e-14 | 52 |
lymphocyte | 5.62e-14 | 53 |
common lymphoid progenitor | 5.62e-14 | 53 |
CD4-positive, alpha-beta T cell | 7.17e-14 | 6 |
CD8-positive, alpha-beta T cell | 1.16e-11 | 11 |
regulatory T cell | 2.67e-11 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.67e-11 | 2 |
naive regulatory T cell | 2.67e-11 | 2 |
naive T cell | 8.19e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.