FFCP PHASE1:Mm9::chr14:53242248..53242261,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=276|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:53242248..53242261,+|id=chr14:53242248..53242261,+|ontology_enrichment_celltype=CL:0000791!2.57e-34!9;CL:0000789!2.57e-34!9;CL:0002420!2.57e-34!9;CL:0002419!2.57e-34!9;CL:0000790!2.57e-34!9;CL:0000624!7.45e-30!8;CL:0000893!1.26e-29!6;CL:0002489!1.26e-29!6;CL:0000898!1.26e-29!6;CL:0000809!1.26e-29!6;CL:0000810!1.26e-29!6;CL:0000895!1.26e-29!6;CL:0000808!1.26e-29!6;CL:0000894!1.26e-29!6;CL:0000806!1.26e-29!6;CL:0000807!1.26e-29!6;CL:0000805!1.26e-29!6;CL:0002425!1.26e-29!6;CL:0002436!1.26e-29!6;CL:0002427!1.26e-29!6;CL:0002428!1.26e-29!6;CL:0002429!1.26e-29!6;CL:0002433!1.26e-29!6;CL:0002431!1.26e-29!6;CL:0002432!1.26e-29!6;CL:0000084!6.51e-28!11;CL:0000827!6.51e-28!11;CL:0000838!1.65e-25!12;CL:0000542!1.79e-23!13;CL:0000051!1.79e-23!13;CL:0000738!1.01e-17!17;CL:0002087!1.01e-17!17;CL:0002031!1.14e-14!25;CL:0000988!3.49e-11!32;CL:0002032!3.49e-11!32;CL:0000037!3.49e-11!32;CL:0000566!3.49e-11!32;CL:0000837!3.49e-11!32;CL:0002320!2.19e-07!46;CL:0000134!2.19e-07!46|ontology_enrichment_celltype_v019_2=CL:0000791,4.97e-77,9;CL:0000789,4.97e-77,9;CL:0002420,4.97e-77,9;CL:0002419,4.97e-77,9;CL:0000790,4.97e-77,9;CL:0000624,9.18e-67,8;CL:0000893,1.05e-65,6;CL:0002489,1.05e-65,6;CL:0000898,1.05e-65,6;CL:0000809,1.05e-65,6;CL:0000810,1.05e-65,6;CL:0000895,1.05e-65,6;CL:0000808,1.05e-65,6;CL:0000894,1.05e-65,6;CL:0000806,1.05e-65,6;CL:0000807,1.05e-65,6;CL:0000805,1.05e-65,6;CL:0002425,1.05e-65,6;CL:0002436,1.05e-65,6;CL:0002427,1.05e-65,6;CL:0002428,1.05e-65,6;CL:0002429,1.05e-65,6;CL:0002433,1.05e-65,6;CL:0002431,1.05e-65,6;CL:0002432,1.05e-65,6;CL:0000084,4.29e-63,11;CL:0000827,4.29e-63,11;CL:0000838,7.26e-58,12;CL:0000542,1.94e-53,13;CL:0000051,1.94e-53,13;CL:0000738,6.20e-41,17;CL:0002087,6.20e-41,17;CL:0002031,6.66e-28,25;CL:0000988,7.89e-22,32;CL:0002032,7.89e-22,32;CL:0000037,7.89e-22,32;CL:0000837,7.89e-22,32;CL:0002320,3.33e-15,46;CL:0000134,3.33e-15,46;CL:0000219,5.97e-13,54;CL:0000815,4.30e-12,1;CL:0000792,4.30e-12,1;CL:0000625,7.11e-12,1;CL:0000723,1.22e-07,91;CL:0000048,1.22e-07,91;CL:0000034,3.71e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.06e-43!23;UBERON:0000974!1.06e-43!23;UBERON:0004807!1.06e-43!23;UBERON:0005058!1.06e-43!23;UBERON:0003351!1.06e-43!23;UBERON:0009113!1.06e-43!23;UBERON:0003295!1.06e-43!23;UBERON:0009722!1.06e-43!23;UBERON:0005562!1.06e-43!23;UBERON:0007690!1.06e-43!23;UBERON:0006562!8.53e-42!24;UBERON:0003408!8.53e-42!24;UBERON:0001557!8.53e-42!24;UBERON:0001042!8.53e-42!24;UBERON:0008814!8.53e-42!24;UBERON:0009145!8.53e-42!24;UBERON:0000072!6.43e-37!27;UBERON:0004177!3.17e-34!29;UBERON:0000063!5.45e-28!35;UBERON:0002193!8.10e-26!48;UBERON:0002390!2.52e-24!45;UBERON:0003061!2.52e-24!45;UBERON:0000065!1.42e-23!41;UBERON:0001004!5.85e-23!42;UBERON:0005057!1.64e-18!51;UBERON:0003929!5.32e-17!55;UBERON:0002405!6.07e-17!70;UBERON:0002368!2.15e-15!60;UBERON:0002530!4.96e-14!65;UBERON:0000490!8.77e-14!66;UBERON:0005911!4.40e-13!69;UBERON:0003081!5.78e-13!88;UBERON:0000949!1.93e-12!72;UBERON:0000153!1.96e-10!94;UBERON:0007811!4.98e-10!86;UBERON:0000064!8.85e-10!99;UBERON:0001041!3.22e-09!92;UBERON:0000077!1.28e-08!97;UBERON:0002384!2.19e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.33e-17,23;UBERON:0000974,2.33e-17,23;UBERON:0004807,2.33e-17,23;UBERON:0005058,2.33e-17,23;UBERON:0003351,2.33e-17,23;UBERON:0009113,2.33e-17,23;UBERON:0003295,2.33e-17,23;UBERON:0009722,2.33e-17,23;UBERON:0005562,2.33e-17,23;UBERON:0007690,2.33e-17,23;UBERON:0006562,1.21e-16,24;UBERON:0003408,1.21e-16,24;UBERON:0001557,1.21e-16,24;UBERON:0001042,1.21e-16,24;UBERON:0008814,1.21e-16,24;UBERON:0009145,1.21e-16,24;UBERON:0002384,3.33e-15,46;UBERON:0000072,8.24e-15,27;UBERON:0004177,8.48e-14,29;UBERON:0005057,8.48e-14,29;UBERON:0000077,1.89e-11,35;UBERON:0007811,3.92e-11,36;UBERON:0000065,8.81e-10,41;UBERON:0001004,1.50e-09,42;UBERON:0000153,2.51e-09,43;UBERON:0002390,6.50e-09,45;UBERON:0003061,6.50e-09,45;UBERON:0002193,2.34e-08,48;UBERON:0002405,2.34e-08,48;UBERON:0003929,2.73e-07,55|phase1_expression=0,0,0,0,0,0,0,2.45334314538995,4.22366166455,8.66038747391376,1.54096171402954,3.58974715479014,2.9104124088305,3.14713448708391,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0.147689527174577,0.302899349844443,0.15241361331,0.403304740547362,0.292373642219257,0.481059208201647,0.701261413089414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr14:53242248..53242261,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=276 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:53242248..53242261,+ | |||
|id=chr14:53242248..53242261,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.57e-34!9;CL:0000789!2.57e-34!9;CL:0002420!2.57e-34!9;CL:0002419!2.57e-34!9;CL:0000790!2.57e-34!9;CL:0000624!7.45e-30!8;CL:0000893!1.26e-29!6;CL:0002489!1.26e-29!6;CL:0000898!1.26e-29!6;CL:0000809!1.26e-29!6;CL:0000810!1.26e-29!6;CL:0000895!1.26e-29!6;CL:0000808!1.26e-29!6;CL:0000894!1.26e-29!6;CL:0000806!1.26e-29!6;CL:0000807!1.26e-29!6;CL:0000805!1.26e-29!6;CL:0002425!1.26e-29!6;CL:0002436!1.26e-29!6;CL:0002427!1.26e-29!6;CL:0002428!1.26e-29!6;CL:0002429!1.26e-29!6;CL:0002433!1.26e-29!6;CL:0002431!1.26e-29!6;CL:0002432!1.26e-29!6;CL:0000084!6.51e-28!11;CL:0000827!6.51e-28!11;CL:0000838!1.65e-25!12;CL:0000542!1.79e-23!13;CL:0000051!1.79e-23!13;CL:0000738!1.01e-17!17;CL:0002087!1.01e-17!17;CL:0002031!1.14e-14!25;CL:0000988!3.49e-11!32;CL:0002032!3.49e-11!32;CL:0000037!3.49e-11!32;CL:0000566!3.49e-11!32;CL:0000837!3.49e-11!32;CL:0002320!2.19e-07!46;CL:0000134!2.19e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.97e-77,9;CL:0000789,4.97e-77,9;CL:0002420,4.97e-77,9;CL:0002419,4.97e-77,9;CL:0000790,4.97e-77,9;CL:0000624,9.18e-67,8;CL:0000893,1.05e-65,6;CL:0002489,1.05e-65,6;CL:0000898,1.05e-65,6;CL:0000809,1.05e-65,6;CL:0000810,1.05e-65,6;CL:0000895,1.05e-65,6;CL:0000808,1.05e-65,6;CL:0000894,1.05e-65,6;CL:0000806,1.05e-65,6;CL:0000807,1.05e-65,6;CL:0000805,1.05e-65,6;CL:0002425,1.05e-65,6;CL:0002436,1.05e-65,6;CL:0002427,1.05e-65,6;CL:0002428,1.05e-65,6;CL:0002429,1.05e-65,6;CL:0002433,1.05e-65,6;CL:0002431,1.05e-65,6;CL:0002432,1.05e-65,6;CL:0000084,4.29e-63,11;CL:0000827,4.29e-63,11;CL:0000838,7.26e-58,12;CL:0000542,1.94e-53,13;CL:0000051,1.94e-53,13;CL:0000738,6.20e-41,17;CL:0002087,6.20e-41,17;CL:0002031,6.66e-28,25;CL:0000988,7.89e-22,32;CL:0002032,7.89e-22,32;CL:0000037,7.89e-22,32;CL:0000837,7.89e-22,32;CL:0002320,3.33e-15,46;CL:0000134,3.33e-15,46;CL:0000219,5.97e-13,54;CL:0000815,4.30e-12,1;CL:0000792,4.30e-12,1;CL:0000625,7.11e-12,1;CL:0000723,1.22e-07,91;CL:0000048,1.22e-07,91;CL:0000034,3.71e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.06e-43!23;UBERON:0000974!1.06e-43!23;UBERON:0004807!1.06e-43!23;UBERON:0005058!1.06e-43!23;UBERON:0003351!1.06e-43!23;UBERON:0009113!1.06e-43!23;UBERON:0003295!1.06e-43!23;UBERON:0009722!1.06e-43!23;UBERON:0005562!1.06e-43!23;UBERON:0007690!1.06e-43!23;UBERON:0006562!8.53e-42!24;UBERON:0003408!8.53e-42!24;UBERON:0001557!8.53e-42!24;UBERON:0001042!8.53e-42!24;UBERON:0008814!8.53e-42!24;UBERON:0009145!8.53e-42!24;UBERON:0000072!6.43e-37!27;UBERON:0004177!3.17e-34!29;UBERON:0000063!5.45e-28!35;UBERON:0002193!8.10e-26!48;UBERON:0002390!2.52e-24!45;UBERON:0003061!2.52e-24!45;UBERON:0000065!1.42e-23!41;UBERON:0001004!5.85e-23!42;UBERON:0005057!1.64e-18!51;UBERON:0003929!5.32e-17!55;UBERON:0002405!6.07e-17!70;UBERON:0002368!2.15e-15!60;UBERON:0002530!4.96e-14!65;UBERON:0000490!8.77e-14!66;UBERON:0005911!4.40e-13!69;UBERON:0003081!5.78e-13!88;UBERON:0000949!1.93e-12!72;UBERON:0000153!1.96e-10!94;UBERON:0007811!4.98e-10!86;UBERON:0000064!8.85e-10!99;UBERON:0001041!3.22e-09!92;UBERON:0000077!1.28e-08!97;UBERON:0002384!2.19e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.33e-17,23;UBERON:0000974,2.33e-17,23;UBERON:0004807,2.33e-17,23;UBERON:0005058,2.33e-17,23;UBERON:0003351,2.33e-17,23;UBERON:0009113,2.33e-17,23;UBERON:0003295,2.33e-17,23;UBERON:0009722,2.33e-17,23;UBERON:0005562,2.33e-17,23;UBERON:0007690,2.33e-17,23;UBERON:0006562,1.21e-16,24;UBERON:0003408,1.21e-16,24;UBERON:0001557,1.21e-16,24;UBERON:0001042,1.21e-16,24;UBERON:0008814,1.21e-16,24;UBERON:0009145,1.21e-16,24;UBERON:0002384,3.33e-15,46;UBERON:0000072,8.24e-15,27;UBERON:0004177,8.48e-14,29;UBERON:0005057,8.48e-14,29;UBERON:0000077,1.89e-11,35;UBERON:0007811,3.92e-11,36;UBERON:0000065,8.81e-10,41;UBERON:0001004,1.50e-09,42;UBERON:0000153,2.51e-09,43;UBERON:0002390,6.50e-09,45;UBERON:0003061,6.50e-09,45;UBERON:0002193,2.34e-08,48;UBERON:0002405,2.34e-08,48;UBERON:0003929,2.73e-07,55 | |||
|phase1_expression=0,0,0,0,0,0,0,2.45334314538995,4.22366166455,8.66038747391376,1.54096171402954,3.58974715479014,2.9104124088305,3.14713448708391,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0.147689527174577,0.302899349844443,0.15241361331,0.403304740547362,0.292373642219257,0.481059208201647,0.701261413089414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:53242248..53242261,+ | |||
}} |
Revision as of 02:18, 13 September 2013
Short description: | p@chr14:53242248..53242261, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:53242248..53242261, + |
Coexpression cluster: | MCL_coexpression_mm9:276 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.33e-17 | 23 |
neck | 2.33e-17 | 23 |
respiratory system epithelium | 2.33e-17 | 23 |
hemolymphoid system gland | 2.33e-17 | 23 |
pharyngeal epithelium | 2.33e-17 | 23 |
thymic region | 2.33e-17 | 23 |
pharyngeal gland | 2.33e-17 | 23 |
entire pharyngeal arch endoderm | 2.33e-17 | 23 |
thymus primordium | 2.33e-17 | 23 |
early pharyngeal endoderm | 2.33e-17 | 23 |
pharynx | 1.21e-16 | 24 |
gland of gut | 1.21e-16 | 24 |
upper respiratory tract | 1.21e-16 | 24 |
chordate pharynx | 1.21e-16 | 24 |
pharyngeal arch system | 1.21e-16 | 24 |
pharyngeal region of foregut | 1.21e-16 | 24 |
connective tissue | 3.33e-15 | 46 |
segment of respiratory tract | 8.24e-15 | 27 |
hemopoietic organ | 8.48e-14 | 29 |
immune organ | 8.48e-14 | 29 |
mixed endoderm/mesoderm-derived structure | 1.89e-11 | 35 |
craniocervical region | 3.92e-11 | 36 |
respiratory tract | 8.81e-10 | 41 |
respiratory system | 1.50e-09 | 42 |
anterior region of body | 2.51e-09 | 43 |
hematopoietic system | 6.50e-09 | 45 |
blood island | 6.50e-09 | 45 |
hemolymphoid system | 2.34e-08 | 48 |
immune system | 2.34e-08 | 48 |
gut epithelium | 2.73e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.