FFCP PHASE1:Mm9::chr14:66598509..66598546,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=290|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:66598509..66598546,+|id=chr14:66598509..66598546,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,2.93e-10,5;CL:0000068,1.85e-07,3;CL:0002202,1.85e-07,3;CL:0000069,1.85e-07,3;CL:0002632,1.85e-07,3;CL:0002368,1.85e-07,3;CL:0000307,1.85e-07,3;CL:0000377,1.85e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000062!7.62e-12!269;UBERON:0000466!4.73e-09!79;UBERON:0000480!3.69e-08!308;UBERON:0000467!3.69e-08!308;UBERON:0003886!3.25e-07!38;UBERON:0005177!4.61e-07!85;UBERON:0002021!7.59e-07!10;UBERON:0000411!7.59e-07!10;UBERON:0001950!7.59e-07!10;UBERON:0002553!8.74e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0002365,6.23e-10,25;UBERON:0002330,6.23e-10,25;UBERON:0002107,6.84e-10,22;UBERON:0007499,6.84e-10,22;UBERON:0006925,6.84e-10,22;UBERON:0009497,6.84e-10,22;UBERON:0000015,6.84e-10,22;UBERON:0002423,6.84e-10,22;UBERON:0006235,6.84e-10,22;UBERON:0008835,6.84e-10,22;UBERON:0003894,6.84e-10,22;UBERON:0004161,6.84e-10,22;UBERON:0008836,6.84e-10,22;UBERON:0009854,2.44e-09,23;UBERON:0009856,2.44e-09,23;UBERON:0002021,6.61e-08,10;UBERON:0000411,6.61e-08,10;UBERON:0001950,6.61e-08,10;UBERON:0003126,1.85e-07,3;UBERON:0001005,1.85e-07,3;UBERON:0007196,1.85e-07,3;UBERON:0001558,1.85e-07,3;UBERON:0002619,6.55e-07,17|phase1_expression=0.960893082628764,0.697950815278722,0,0,0,0,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,3.51983330145495,3.67054849707472,0,0.86152399231815,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,1.09843091367236,3.69416808241138,1.1198913730029,0,0,0,0,0,0,1.54701627683233,0,0,0,1.35537812827653,0.889294796111139,0,0,0,0.599200221036809,3.84218305321555,0,0,0,0.285650984403804,0.662605622854841,0,0,0,0,0.766124028511126,0.921639199537461,0.131886287730194,0,0,3.35019598801657,3.37657566019008,2.75036845998258,0.294628585473668,0.711858403995515,0,0,0,6.66688324013859,6.0229671388697,13.599426674155,5.39703191637817,3.89865850468601,2.24013443548668,0.421333260395256,0,0,0,6.33795388995062,0,0,0,23.3810324292111,24.0691872201344,29.8259422558722,1.59857431606684,0.776813650941515,0.445326417194474,0.173485326766136,0,0,0,0.23517741427141,0.251333182659351,0.494389935468748,0.289198713839823,0,0,0,0,0,0.585561594023094,1.04723353406728,0,0,0,0,0.149790639404823,0.915001205637253,0,0.521472960576829,0.511430914660661,0.83115217823824,0.162241263067758,0.203678727700633,1.49288364732112,17.1851475734899,0.420883711772948,0,0,0,0,0,0.2562274405697,0,0,0,0,0,0,0,0,0,0.796137067273973,0,0,0,0,0,0,0,0,0.462801338662135,0,0.536546802799238,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0.878200461164203,0.268412837520744,0.630869845692382,0.205809224758569,0.330418782983798,0,0,0,0.38660238396628,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0.898819408654221,0,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0.316182685621286,0.295220295959204,0.627994911365499,0.123397163921801,2.66807364378434,0,0,0,0,0.482354319504834,0.25462585178142,0,0.324270453550071,1.64736847912849,11.5014565221884,0,0,1.01031551178845,1.25578189465339,2.41221760681684,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,2.45882136509518,0.551873492609465,0.481651769963376,0.234423373184406,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0.321321316421807,0.567760340833074,0,0,0,2.65490276679926,0,0,0.565815239267694,0.885905678642318,1.53717573971964,0.258428293168221,1.09060118843252,0.356497378384721,0.948110273807448,3.16255825724996,5.15677716240934,0.340439605753788,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0,0,0.220528398054962,0,0.161464426695906,0,0.119372344003136,0.164140899745061,0,0.927126510052548,0,0.206386867963223,0,0.376736914009382,0.136694227721025,0.228778173206523,0,0,0,4.77335309007557,0,0.406638934253697,0.432021363287205,0.418176592028937,0.436725127492355,0.269728692769641,0.661227645802687,1.04702376793612,0,0,1.12738587736838,0.299033092087958,0.330916980914195,0.388902376688095,1.03327858782185,0.337912250981556,0.469428954583016,0.5208175393758,1.46803082195995,2.41584120826006,0,0.316011120628178,0.202725215290164,0.102710957164827,0,0,0.39736270956253,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.772758376128762,0,0,0,0,0.564751842617067,1.38097570952153,1.71868654031819,0.859265911718438,1.37016503954128,3.0215755895588,4.72515750162264,3.15224842256954,2.26571204492102,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0.429742108096597,0,0,0|short_description=p@chr14:66598509..66598546,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=290 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:66598509..66598546,+ | |||
|id=chr14:66598509..66598546,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.93e-10,5;CL:0000068,1.85e-07,3;CL:0002202,1.85e-07,3;CL:0000069,1.85e-07,3;CL:0002632,1.85e-07,3;CL:0002368,1.85e-07,3;CL:0000307,1.85e-07,3;CL:0000377,1.85e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!7.62e-12!269;UBERON:0000466!4.73e-09!79;UBERON:0000480!3.69e-08!308;UBERON:0000467!3.69e-08!308;UBERON:0003886!3.25e-07!38;UBERON:0005177!4.61e-07!85;UBERON:0002021!7.59e-07!10;UBERON:0000411!7.59e-07!10;UBERON:0001950!7.59e-07!10;UBERON:0002553!8.74e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,6.23e-10,25;UBERON:0002330,6.23e-10,25;UBERON:0002107,6.84e-10,22;UBERON:0007499,6.84e-10,22;UBERON:0006925,6.84e-10,22;UBERON:0009497,6.84e-10,22;UBERON:0000015,6.84e-10,22;UBERON:0002423,6.84e-10,22;UBERON:0006235,6.84e-10,22;UBERON:0008835,6.84e-10,22;UBERON:0003894,6.84e-10,22;UBERON:0004161,6.84e-10,22;UBERON:0008836,6.84e-10,22;UBERON:0009854,2.44e-09,23;UBERON:0009856,2.44e-09,23;UBERON:0002021,6.61e-08,10;UBERON:0000411,6.61e-08,10;UBERON:0001950,6.61e-08,10;UBERON:0003126,1.85e-07,3;UBERON:0001005,1.85e-07,3;UBERON:0007196,1.85e-07,3;UBERON:0001558,1.85e-07,3;UBERON:0002619,6.55e-07,17 | |||
|phase1_expression=0.960893082628764,0.697950815278722,0,0,0,0,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,3.51983330145495,3.67054849707472,0,0.86152399231815,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,1.09843091367236,3.69416808241138,1.1198913730029,0,0,0,0,0,0,1.54701627683233,0,0,0,1.35537812827653,0.889294796111139,0,0,0,0.599200221036809,3.84218305321555,0,0,0,0.285650984403804,0.662605622854841,0,0,0,0,0.766124028511126,0.921639199537461,0.131886287730194,0,0,3.35019598801657,3.37657566019008,2.75036845998258,0.294628585473668,0.711858403995515,0,0,0,6.66688324013859,6.0229671388697,13.599426674155,5.39703191637817,3.89865850468601,2.24013443548668,0.421333260395256,0,0,0,6.33795388995062,0,0,0,23.3810324292111,24.0691872201344,29.8259422558722,1.59857431606684,0.776813650941515,0.445326417194474,0.173485326766136,0,0,0,0.23517741427141,0.251333182659351,0.494389935468748,0.289198713839823,0,0,0,0,0,0.585561594023094,1.04723353406728,0,0,0,0,0.149790639404823,0.915001205637253,0,0.521472960576829,0.511430914660661,0.83115217823824,0.162241263067758,0.203678727700633,1.49288364732112,17.1851475734899,0.420883711772948,0,0,0,0,0,0.2562274405697,0,0,0,0,0,0,0,0,0,0.796137067273973,0,0,0,0,0,0,0,0,0.462801338662135,0,0.536546802799238,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0.878200461164203,0.268412837520744,0.630869845692382,0.205809224758569,0.330418782983798,0,0,0,0.38660238396628,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0.898819408654221,0,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0.316182685621286,0.295220295959204,0.627994911365499,0.123397163921801,2.66807364378434,0,0,0,0,0.482354319504834,0.25462585178142,0,0.324270453550071,1.64736847912849,11.5014565221884,0,0,1.01031551178845,1.25578189465339,2.41221760681684,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,2.45882136509518,0.551873492609465,0.481651769963376,0.234423373184406,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0.321321316421807,0.567760340833074,0,0,0,2.65490276679926,0,0,0.565815239267694,0.885905678642318,1.53717573971964,0.258428293168221,1.09060118843252,0.356497378384721,0.948110273807448,3.16255825724996,5.15677716240934,0.340439605753788,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0,0,0.220528398054962,0,0.161464426695906,0,0.119372344003136,0.164140899745061,0,0.927126510052548,0,0.206386867963223,0,0.376736914009382,0.136694227721025,0.228778173206523,0,0,0,4.77335309007557,0,0.406638934253697,0.432021363287205,0.418176592028937,0.436725127492355,0.269728692769641,0.661227645802687,1.04702376793612,0,0,1.12738587736838,0.299033092087958,0.330916980914195,0.388902376688095,1.03327858782185,0.337912250981556,0.469428954583016,0.5208175393758,1.46803082195995,2.41584120826006,0,0.316011120628178,0.202725215290164,0.102710957164827,0,0,0.39736270956253,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.772758376128762,0,0,0,0,0.564751842617067,1.38097570952153,1.71868654031819,0.859265911718438,1.37016503954128,3.0215755895588,4.72515750162264,3.15224842256954,2.26571204492102,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0.429742108096597,0,0,0 | |||
|short_description=p@chr14:66598509..66598546,+ | |||
}} |
Revision as of 02:49, 13 September 2013
Short description: | p@chr14:66598509..66598546, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:66598509..66598546, + |
Coexpression cluster: | MCL_coexpression_mm9:290 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.93e-10 | 5 |
duct epithelial cell | 1.85e-07 | 3 |
epithelial cell of tracheobronchial tree | 1.85e-07 | 3 |
branched duct epithelial cell | 1.85e-07 | 3 |
epithelial cell of lower respiratory tract | 1.85e-07 | 3 |
respiratory epithelial cell | 1.85e-07 | 3 |
tracheal epithelial cell | 1.85e-07 | 3 |
tracheoblast | 1.85e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
exocrine gland | 6.23e-10 | 25 |
exocrine system | 6.23e-10 | 25 |
liver | 6.84e-10 | 22 |
epithelial sac | 6.84e-10 | 22 |
digestive gland | 6.84e-10 | 22 |
epithelium of foregut-midgut junction | 6.84e-10 | 22 |
anatomical boundary | 6.84e-10 | 22 |
hepatobiliary system | 6.84e-10 | 22 |
foregut-midgut junction | 6.84e-10 | 22 |
hepatic diverticulum | 6.84e-10 | 22 |
liver primordium | 6.84e-10 | 22 |
septum transversum | 6.84e-10 | 22 |
liver bud | 6.84e-10 | 22 |
digestive tract diverticulum | 2.44e-09 | 23 |
sac | 2.44e-09 | 23 |
occipital lobe | 6.61e-08 | 10 |
visual cortex | 6.61e-08 | 10 |
neocortex | 6.61e-08 | 10 |
trachea | 1.85e-07 | 3 |
respiratory airway | 1.85e-07 | 3 |
tracheobronchial tree | 1.85e-07 | 3 |
lower respiratory tract | 1.85e-07 | 3 |
regional part of cerebral cortex | 6.55e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.