FFCP PHASE1:Mm9::chr15:42967592..42967594,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=52|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:42967592..42967594,-|id=chr15:42967592..42967594,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002293,4.98e-22,3;CL:0000192,1.16e-20,3;CL:0000359,1.16e-20,3;CL:0002539,1.16e-20,3;CL:0000514,1.16e-20,3;CL:0000680,1.19e-10,6;CL:0000187,1.19e-10,6;CL:0000056,1.19e-10,6;CL:0000222,3.29e-09,7;CL:0000355,2.80e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.16e-20,3;UBERON:0004237,1.16e-20,3;UBERON:0004695,1.16e-20,3;UBERON:0002111,1.16e-20,3;UBERON:0004178,1.16e-20,3;UBERON:0000947,1.14e-15,4;UBERON:0001637,1.14e-15,4;UBERON:0004573,1.14e-15,4;UBERON:0003509,1.14e-15,4;UBERON:0004571,1.14e-15,4;UBERON:0010191,1.14e-15,4;UBERON:0004572,1.14e-15,4;UBERON:0000055,1.16e-12,5;UBERON:0007500,1.16e-12,5;UBERON:0001981,1.16e-12,5;UBERON:0002049,1.16e-12,5;UBERON:0007798,1.16e-12,5;UBERON:0004537,1.16e-12,5;UBERON:0006965,1.16e-12,5;UBERON:0000998,1.05e-07,1;UBERON:0007194,1.05e-07,1;UBERON:0006868,1.05e-07,1;UBERON:0001134,2.80e-07,9;UBERON:0002036,2.80e-07,9;UBERON:0002385,2.80e-07,9;UBERON:0000486,2.80e-07,9;UBERON:0007503,2.80e-07,9;UBERON:0001015,2.80e-07,9;UBERON:0002329,2.80e-07,9;UBERON:0003082,2.80e-07,9;UBERON:0003059,2.80e-07,9;UBERON:0007282,2.80e-07,9;UBERON:0004290,2.80e-07,9;UBERON:0009618,2.80e-07,9|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.17008658030214,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14024590558481,2.33166941804883,1.65192076945513,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.77204903218562,1.81850203222008,3.18005617059306,0,50.047326191584,91.7298862943925,135.102673599133,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0.323533699894818,0.441683036920787,0.484875253135222,0,0,0,0,0.11981512450592,0,0,0,0,0,0.521472960576829,0.255715457330331,0,0.162241263067758,0.101839363850316,0.248813941220186,0,0.420883711772948,0,0,0,0.60281927134286,1.2246569847239,2.69038812598185,0.843315521037559,0.258703370739016,0,0.378212160335639,0.527853372491847,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0.308534225774757,0,0,0.116765342367169,0,0,0,0,0,0,0.841159794256509,0,0,0,0,0,0.38660238396628,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.814824882210129,0.678980343100753,0.704070744865506,0,0.238043640886014,0.195133647857799,0.315270288212382,1.99318220683897,0.478364305972461,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0,0.395287777946524,0,0,0.35613120733451,0.488660878060728,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0.329098041204242,0,0.23467170806371,0,0,0.16488625294148,0,0.542816324353403,0.119372344003136,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0.954670618015114,0.316335993581135,0.203319467126849,0.540026704109006,0.836353184057875,0.218362563746178,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0.39061315453185,0.524296722128554,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00314420807073,0,0,0.572895513439397,0.171853182343688,0.685082519770642,0,0,0,0.453142408984205,0,0,0.399024873401031,0.341467211508268,0,0,0,0.666740183404846,0,0,0.252697211763798,0,0,0.187283014939765,0.192075457214608,0.287177344778066,0.476293691283074,0.115884325944855,0.578727661391115,0,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.376437521661322,0.25384382367503,0.365855945745545,0.789209134313529,0.407412341537585,0.561142271657738,0.593175090620871,0.29551344712669,0,0,0.192906610981141,0,0.233931608445408,0,0.956441660344217,0,0|short_description=p@chr15:42967592..42967594,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=52 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:42967592..42967594,- | |||
|id=chr15:42967592..42967594,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002293,4.98e-22,3;CL:0000192,1.16e-20,3;CL:0000359,1.16e-20,3;CL:0002539,1.16e-20,3;CL:0000514,1.16e-20,3;CL:0000680,1.19e-10,6;CL:0000187,1.19e-10,6;CL:0000056,1.19e-10,6;CL:0000222,3.29e-09,7;CL:0000355,2.80e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.16e-20,3;UBERON:0004237,1.16e-20,3;UBERON:0004695,1.16e-20,3;UBERON:0002111,1.16e-20,3;UBERON:0004178,1.16e-20,3;UBERON:0000947,1.14e-15,4;UBERON:0001637,1.14e-15,4;UBERON:0004573,1.14e-15,4;UBERON:0003509,1.14e-15,4;UBERON:0004571,1.14e-15,4;UBERON:0010191,1.14e-15,4;UBERON:0004572,1.14e-15,4;UBERON:0000055,1.16e-12,5;UBERON:0007500,1.16e-12,5;UBERON:0001981,1.16e-12,5;UBERON:0002049,1.16e-12,5;UBERON:0007798,1.16e-12,5;UBERON:0004537,1.16e-12,5;UBERON:0006965,1.16e-12,5;UBERON:0000998,1.05e-07,1;UBERON:0007194,1.05e-07,1;UBERON:0006868,1.05e-07,1;UBERON:0001134,2.80e-07,9;UBERON:0002036,2.80e-07,9;UBERON:0002385,2.80e-07,9;UBERON:0000486,2.80e-07,9;UBERON:0007503,2.80e-07,9;UBERON:0001015,2.80e-07,9;UBERON:0002329,2.80e-07,9;UBERON:0003082,2.80e-07,9;UBERON:0003059,2.80e-07,9;UBERON:0007282,2.80e-07,9;UBERON:0004290,2.80e-07,9;UBERON:0009618,2.80e-07,9 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.17008658030214,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14024590558481,2.33166941804883,1.65192076945513,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.77204903218562,1.81850203222008,3.18005617059306,0,50.047326191584,91.7298862943925,135.102673599133,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0,0,0,0,0,0.323533699894818,0.441683036920787,0.484875253135222,0,0,0,0,0.11981512450592,0,0,0,0,0,0.521472960576829,0.255715457330331,0,0.162241263067758,0.101839363850316,0.248813941220186,0,0.420883711772948,0,0,0,0.60281927134286,1.2246569847239,2.69038812598185,0.843315521037559,0.258703370739016,0,0.378212160335639,0.527853372491847,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0.308534225774757,0,0,0.116765342367169,0,0,0,0,0,0,0.841159794256509,0,0,0,0,0,0.38660238396628,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.814824882210129,0.678980343100753,0.704070744865506,0,0.238043640886014,0.195133647857799,0.315270288212382,1.99318220683897,0.478364305972461,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0,0.395287777946524,0,0,0.35613120733451,0.488660878060728,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0.329098041204242,0,0.23467170806371,0,0,0.16488625294148,0,0.542816324353403,0.119372344003136,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0.954670618015114,0.316335993581135,0.203319467126849,0.540026704109006,0.836353184057875,0.218362563746178,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0.39061315453185,0.524296722128554,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00314420807073,0,0,0.572895513439397,0.171853182343688,0.685082519770642,0,0,0,0.453142408984205,0,0,0.399024873401031,0.341467211508268,0,0,0,0.666740183404846,0,0,0.252697211763798,0,0,0.187283014939765,0.192075457214608,0.287177344778066,0.476293691283074,0.115884325944855,0.578727661391115,0,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.376437521661322,0.25384382367503,0.365855945745545,0.789209134313529,0.407412341537585,0.561142271657738,0.593175090620871,0.29551344712669,0,0,0.192906610981141,0,0.233931608445408,0,0.956441660344217,0,0 | |||
|short_description=p@chr15:42967592..42967594,- | |||
}} |
Revision as of 10:30, 13 September 2013
Short description: | p@chr15:42967592..42967594, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:42967592..42967594, - |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 4.98e-22 | 3 |
smooth muscle cell | 1.16e-20 | 3 |
vascular associated smooth muscle cell | 1.16e-20 | 3 |
aortic smooth muscle cell | 1.16e-20 | 3 |
smooth muscle myoblast | 1.16e-20 | 3 |
muscle precursor cell | 1.19e-10 | 6 |
muscle cell | 1.19e-10 | 6 |
myoblast | 1.19e-10 | 6 |
mesodermal cell | 3.29e-09 | 7 |
multi-potent skeletal muscle stem cell | 2.80e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 1.16e-20 | 3 |
blood vessel smooth muscle | 1.16e-20 | 3 |
arterial system smooth muscle | 1.16e-20 | 3 |
artery smooth muscle tissue | 1.16e-20 | 3 |
aorta smooth muscle tissue | 1.16e-20 | 3 |
aorta | 1.14e-15 | 4 |
artery | 1.14e-15 | 4 |
systemic artery | 1.14e-15 | 4 |
arterial blood vessel | 1.14e-15 | 4 |
systemic arterial system | 1.14e-15 | 4 |
aortic system | 1.14e-15 | 4 |
arterial system | 1.14e-15 | 4 |
vessel | 1.16e-12 | 5 |
epithelial tube open at both ends | 1.16e-12 | 5 |
blood vessel | 1.16e-12 | 5 |
vasculature | 1.16e-12 | 5 |
vascular system | 1.16e-12 | 5 |
blood vasculature | 1.16e-12 | 5 |
vascular cord | 1.16e-12 | 5 |
seminal vesicle | 1.05e-07 | 1 |
vesicular gland | 1.05e-07 | 1 |
seminal fluid secreting gland | 1.05e-07 | 1 |
skeletal muscle tissue | 2.80e-07 | 9 |
striated muscle tissue | 2.80e-07 | 9 |
muscle tissue | 2.80e-07 | 9 |
multilaminar epithelium | 2.80e-07 | 9 |
epithelial vesicle | 2.80e-07 | 9 |
musculature | 2.80e-07 | 9 |
somite | 2.80e-07 | 9 |
myotome | 2.80e-07 | 9 |
presomitic mesoderm | 2.80e-07 | 9 |
presumptive segmental plate | 2.80e-07 | 9 |
dermomyotome | 2.80e-07 | 9 |
trunk paraxial mesoderm | 2.80e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.