FFCP PHASE1:Mm9::chr15:63829598..63829609,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=223601|HGNC=|UniProt=Q921M7|association_with_transcript=-74bp_to_ENSMUST00000164532,uc007vze.2_5end|description=CAGE_peak_5_at_Fam49b_5end|id=chr15:63829598..63829609,-|ontology_enrichment_celltype=CL:0000540!6.22e-11!33;CL:0000047!6.22e-11!33;CL:0000031!6.22e-11!33;CL:0000404!6.22e-11!33;CL:0000117!1.04e-09!23;CL:0000337!1.04e-09!23;CL:0000221!7.89e-09!44;CL:0000133!7.89e-09!44;CL:0002319!1.04e-08!43;CL:0000393!6.40e-07!39;CL:0000211!6.40e-07!39|ontology_enrichment_celltype_v019_2=CL:0000540,7.56e-11,33;CL:0000047,7.56e-11,33;CL:0000031,7.56e-11,33;CL:0000404,7.56e-11,33;CL:0000117,1.32e-09,23;CL:0000337,1.32e-09,23;CL:0000221,9.18e-09,44;CL:0000133,9.18e-09,44;CL:0002319,1.21e-08,43;CL:0000393,7.49e-07,39;CL:0000211,7.49e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.43e-14!75;UBERON:0001016!1.43e-14!75;UBERON:0001017!6.62e-14!73;UBERON:0005743!6.62e-14!73;UBERON:0007811!1.35e-12!86;UBERON:0000153!7.30e-12!94;UBERON:0000033!1.68e-10!63;UBERON:0002346!5.29e-10!71;UBERON:0003075!5.29e-10!71;UBERON:0007284!5.29e-10!71;UBERON:0004121!6.61e-10!102;UBERON:0000924!6.61e-10!102;UBERON:0006601!6.61e-10!102;UBERON:0001049!6.90e-10!52;UBERON:0005068!6.90e-10!52;UBERON:0006241!6.90e-10!52;UBERON:0007135!6.90e-10!52;UBERON:0002020!8.13e-10!34;UBERON:0003056!2.04e-09!49;UBERON:0000955!6.33e-09!50;UBERON:0006238!6.33e-09!50;UBERON:0002616!1.36e-08!49;UBERON:0003080!3.18e-07!40;UBERON:0002791!5.17e-07!29;UBERON:0003528!5.17e-07!29;UBERON:0001893!5.17e-07!29;UBERON:0002780!6.95e-07!39;UBERON:0001890!6.95e-07!39;UBERON:0006240!6.95e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.61e-14,75;UBERON:0001017,7.46e-14,73;UBERON:0002346,3.09e-13,64;UBERON:0003075,3.09e-13,64;UBERON:0007284,3.09e-13,64;UBERON:0004121,1.51e-12,95;UBERON:0000924,1.51e-12,95;UBERON:0006601,1.51e-12,95;UBERON:0000073,3.31e-11,54;UBERON:0010371,6.98e-10,73;UBERON:0001049,7.96e-10,52;UBERON:0005068,7.96e-10,52;UBERON:0006241,7.96e-10,52;UBERON:0007135,7.96e-10,52;UBERON:0002020,9.78e-10,34;UBERON:0003056,2.54e-09,49;UBERON:0000955,1.78e-07,47;UBERON:0006238,1.78e-07,47;UBERON:0002616,3.67e-07,46;UBERON:0003080,3.69e-07,40;UBERON:0003528,6.18e-07,29;UBERON:0002791,6.18e-07,29;UBERON:0001893,6.18e-07,29;UBERON:0002780,8.08e-07,39;UBERON:0001890,8.08e-07,39;UBERON:0006240,8.08e-07,39|phase1_expression=3.20297694209588,1.74487703819681,3.63999391511629,3.93203474698879,3.50627010962443,2.35030980676646,1.86890112476421,1.93684985162364,5.77233760821834,3.7450324211519,8.21846247482424,5.74359544766422,1.88320802924326,1.57356724354195,4.66353666541928,2.42970320867791,2.09868563438444,1.57731082679119,0.548457734422955,2.12194825899015,2.04103896362567,2.48227378002213,2.35079810225042,1.91990907352088,2.2940928106717,3.44539178469012,3.4460959692726,2.15471232685889,2.28028103347649,4.03248207615889,3.32595765982957,0,3.07532393792285,15.8481681015439,1.44425809875637,1.49611180822643,3.06254034393554,2.09265815368454,3.906676722619,9.42342739152837,5.88231488031014,4.09827290975067,7.76816564849846,0.503587271902309,1.01376931219515,1.10128051297009,1.56478268869608,2.39827672018491,1.5378032791413,2.52758868796568,2.09979632438044,2.87505128729943,1.34226084846189,2.17608642603403,2.35265659399725,2.05807548828758,0.573066879877513,1.03134418455488,7.28339259094552,7.93486468908049,8.87363964908651,1.35537812827653,0,0.449949858640699,0,0,1.19840044207362,1.53687322128622,4.97710139080693,2.8351247049655,2.94454945891935,9.42648248532552,7.50953039235486,4.77714116938321,3.45043695665651,0.919218786610021,9.91042928994498,8.81042632787795,5.83704826373725,9.10015385338338,9.42322729104819,7.8137005583514,2.51264699101243,5.6276261003168,7.18151764551008,10.606629077052,9.5389026135399,10.2519695203915,7.04253597998612,3.55186332501892,2.31891590961342,0.860423876981386,2.719885334831,0,1.94932925234301,0.448026887097336,1.82577746171277,1.36344258062446,1.03914401841148,1.41335829804136,3.52108549441701,1.28326477414318,0,0,4.5463118612355,8.10751569520315,3.53867111510348,1.25602267690966,0,0.890652834388949,1.21439728736295,1.52232739156071,1.15307748628029,1.50722640552623,1.41106448562846,1.75933227861546,1.97755974187499,2.16899035379867,1.76922110389975,3.72063754879041,2.20841518460394,1.93950101254089,0,2.63502717310392,3.35114730901528,1.02182822083437,3.59445373517761,5.99902730993408,4.3203877204842,5.24267237916879,1.83000241127451,4.64921102817598,3.65031072403781,2.04572365864264,3.32460871295296,6.48965052271031,1.12023300235348,1.99051152976149,1.51633655060205,0.631325567659422,4.68433594665733,7.81667155073808,6.12211241338187,7.23383125611432,4.96666443804693,5.76511741281824,5.71580519814346,3.3631438196072,4.95806383745537,5.29497024469894,4.22282697993477,3.72632745126877,1.11218899690239,0.696504333044333,2.05782136407943,1.19420560091096,4.21327912387941,8.23513302767089,10.7982129770325,1.44988040774851,2.11073453982987,3.601241229220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| ||
|EntrezGene=223601 | |||
|HGNC= | |||
|UniProt=Q921M7 | |||
|association_with_transcript=-74bp_to_ENSMUST00000164532,uc007vze.2_5end | |||
|description=CAGE_peak_5_at_Fam49b_5end | |||
|id=chr15:63829598..63829609,- | |||
|ontology_enrichment_celltype=CL:0000540!6.22e-11!33;CL:0000047!6.22e-11!33;CL:0000031!6.22e-11!33;CL:0000404!6.22e-11!33;CL:0000117!1.04e-09!23;CL:0000337!1.04e-09!23;CL:0000221!7.89e-09!44;CL:0000133!7.89e-09!44;CL:0002319!1.04e-08!43;CL:0000393!6.40e-07!39;CL:0000211!6.40e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.56e-11,33;CL:0000047,7.56e-11,33;CL:0000031,7.56e-11,33;CL:0000404,7.56e-11,33;CL:0000117,1.32e-09,23;CL:0000337,1.32e-09,23;CL:0000221,9.18e-09,44;CL:0000133,9.18e-09,44;CL:0002319,1.21e-08,43;CL:0000393,7.49e-07,39;CL:0000211,7.49e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.43e-14!75;UBERON:0001016!1.43e-14!75;UBERON:0001017!6.62e-14!73;UBERON:0005743!6.62e-14!73;UBERON:0007811!1.35e-12!86;UBERON:0000153!7.30e-12!94;UBERON:0000033!1.68e-10!63;UBERON:0002346!5.29e-10!71;UBERON:0003075!5.29e-10!71;UBERON:0007284!5.29e-10!71;UBERON:0004121!6.61e-10!102;UBERON:0000924!6.61e-10!102;UBERON:0006601!6.61e-10!102;UBERON:0001049!6.90e-10!52;UBERON:0005068!6.90e-10!52;UBERON:0006241!6.90e-10!52;UBERON:0007135!6.90e-10!52;UBERON:0002020!8.13e-10!34;UBERON:0003056!2.04e-09!49;UBERON:0000955!6.33e-09!50;UBERON:0006238!6.33e-09!50;UBERON:0002616!1.36e-08!49;UBERON:0003080!3.18e-07!40;UBERON:0002791!5.17e-07!29;UBERON:0003528!5.17e-07!29;UBERON:0001893!5.17e-07!29;UBERON:0002780!6.95e-07!39;UBERON:0001890!6.95e-07!39;UBERON:0006240!6.95e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.61e-14,75;UBERON:0001017,7.46e-14,73;UBERON:0002346,3.09e-13,64;UBERON:0003075,3.09e-13,64;UBERON:0007284,3.09e-13,64;UBERON:0004121,1.51e-12,95;UBERON:0000924,1.51e-12,95;UBERON:0006601,1.51e-12,95;UBERON:0000073,3.31e-11,54;UBERON:0010371,6.98e-10,73;UBERON:0001049,7.96e-10,52;UBERON:0005068,7.96e-10,52;UBERON:0006241,7.96e-10,52;UBERON:0007135,7.96e-10,52;UBERON:0002020,9.78e-10,34;UBERON:0003056,2.54e-09,49;UBERON:0000955,1.78e-07,47;UBERON:0006238,1.78e-07,47;UBERON:0002616,3.67e-07,46;UBERON:0003080,3.69e-07,40;UBERON:0003528,6.18e-07,29;UBERON:0002791,6.18e-07,29;UBERON:0001893,6.18e-07,29;UBERON:0002780,8.08e-07,39;UBERON:0001890,8.08e-07,39;UBERON:0006240,8.08e-07,39 | |||
|phase1_expression=3.20297694209588,1.74487703819681,3.63999391511629,3.93203474698879,3.50627010962443,2.35030980676646,1.86890112476421,1.93684985162364,5.77233760821834,3.7450324211519,8.21846247482424,5.74359544766422,1.88320802924326,1.57356724354195,4.66353666541928,2.42970320867791,2.09868563438444,1.57731082679119,0.548457734422955,2.12194825899015,2.04103896362567,2.48227378002213,2.35079810225042,1.91990907352088,2.2940928106717,3.44539178469012,3.4460959692726,2.15471232685889,2.28028103347649,4.03248207615889,3.32595765982957,0,3.07532393792285,15.8481681015439,1.44425809875637,1.49611180822643,3.06254034393554,2.09265815368454,3.906676722619,9.42342739152837,5.88231488031014,4.09827290975067,7.76816564849846,0.503587271902309,1.01376931219515,1.10128051297009,1.56478268869608,2.39827672018491,1.5378032791413,2.52758868796568,2.09979632438044,2.87505128729943,1.34226084846189,2.17608642603403,2.35265659399725,2.05807548828758,0.573066879877513,1.03134418455488,7.28339259094552,7.93486468908049,8.87363964908651,1.35537812827653,0,0.449949858640699,0,0,1.19840044207362,1.53687322128622,4.97710139080693,2.8351247049655,2.94454945891935,9.42648248532552,7.50953039235486,4.77714116938321,3.45043695665651,0.919218786610021,9.91042928994498,8.81042632787795,5.83704826373725,9.10015385338338,9.42322729104819,7.8137005583514,2.51264699101243,5.6276261003168,7.18151764551008,10.606629077052,9.5389026135399,10.2519695203915,7.04253597998612,3.55186332501892,2.31891590961342,0.860423876981386,2.719885334831,0,1.94932925234301,0.448026887097336,1.82577746171277,1.36344258062446,1.03914401841148,1.41335829804136,3.52108549441701,1.28326477414318,0,0,4.5463118612355,8.10751569520315,3.53867111510348,1.25602267690966,0,0.890652834388949,1.21439728736295,1.52232739156071,1.15307748628029,1.50722640552623,1.41106448562846,1.75933227861546,1.97755974187499,2.16899035379867,1.76922110389975,3.72063754879041,2.20841518460394,1.93950101254089,0,2.63502717310392,3.35114730901528,1.02182822083437,3.59445373517761,5.99902730993408,4.3203877204842,5.24267237916879,1.83000241127451,4.64921102817598,3.65031072403781,2.04572365864264,3.32460871295296,6.48965052271031,1.12023300235348,1.99051152976149,1.51633655060205,0.631325567659422,4.68433594665733,7.81667155073808,6.12211241338187,7.23383125611432,4.96666443804693,5.76511741281824,5.71580519814346,3.3631438196072,4.95806383745537,5.29497024469894,4.22282697993477,3.72632745126877,1.11218899690239,0.696504333044333,2.05782136407943,1.19420560091096,4.21327912387941,8.23513302767089,10.7982129770325,1.44988040774851,2.11073453982987,3.6012412292203,2.13070262026689,1.57411385397923,2.46827380619805,0.465067889500816,1.07309360559848,1.5179494507732,1.81015834904829,1.47750717671186,0.891756905004413,0.292399974850665,0.878200461164203,0.536825675041487,3.15434922846191,4.42489833230923,2.31293148088659,1.32225283331772,2.13288250535234,3.0190767341857,2.83508414908605,2.42020229548011,1.11189021922435,2.09248188723815,2.37264530772256,0.988193728344065,1.75934646160189,2.78539060857611,2.14460495831032,0.898819408654221,1.94524244887225,2.78797782556114,2.27601481143698,2.39921876480431,1.1270773567308,3.05476991767971,2.52138233317913,1.68325967736765,0.822074982615345,0.147610147979602,0.470996183524124,0.616985819609003,1.1858105083486,2.8363667971736,4.32429789249047,4.72210436008193,2.23146133527353,2.41177159752417,1.78238096246994,2.30156909960649,1.13494658742525,2.19649130550465,0,0.744281895337007,0.624075346229121,1.26289438973556,0.896987067609561,0.482443521363367,0.369506380333209,2.84237117655727,3.58522948172457,2.71592137240301,1.64283173801951,1.67506257441816,1.19021820443007,1.36593553500459,0.630540576424764,0.664394068946325,0.318909537314974,0.983179888294428,0.518054945597687,0.289298117163023,0,1.63171705145613,0,0.275936746304732,3.37156238974363,4.80567915028033,0.983609672260053,1.26235463602186,3.78609863299508,5.0757036758563,7.10897212518236,4.06246956519338,2.22798674082394,1.98153571552183,3.64329631507405,4.09158201075837,6.32460444714438,4.81981974632711,0.709700426041343,0.890328018336276,1.14020871547503,0.329940245945071,5.30980553359851,1.69946445308487,1.81394134178851,2.07465587731488,0.590603785761546,1.53717573971964,3.10113951801865,2.54473610634254,2.49548164869305,1.26414703174326,4.21674434299995,0,2.38307724027652,4.14140516272013,2.19909762430683,3.64372959553707,3.90148514013002,2.31879462882692,2.13913726782757,1.2178597964584,3.05073220482823,2.1183207086382,0.220528398054962,1.48397627647332,1.29171541356724,1.68876189798836,1.07435109602823,1.64140899745061,0.582961673259701,3.52308073819968,1.70870880797853,1.65109494370578,1.85194527369712,1.88368457004691,0.820165366326151,2.28778173206523,4.07948231985253,2.37917468950219,3.45499934511059,0.954670618015114,3.16335993581135,2.64315307264903,1.83609079397062,2.09088296014469,0.655087691238533,1.34864346384821,0.909188012978695,0.785267825952089,1.55537967950151,1.242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| |||
|short_description=p5@Fam49b | |||
}} |
Revision as of 10:42, 13 September 2013
Short description: | p5@Fam49b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Fam49b_5end |
Coexpression cluster: | NA |
Association with transcript: | -74bp_to_ENSMUST00000164532, uc007vze.2_5end |
EntrezGene: | Fam49b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.56e-11 | 33 |
neuronal stem cell | 7.56e-11 | 33 |
neuroblast | 7.56e-11 | 33 |
electrically signaling cell | 7.56e-11 | 33 |
CNS neuron (sensu Vertebrata) | 1.32e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.32e-09 | 23 |
ectodermal cell | 9.18e-09 | 44 |
neurectodermal cell | 9.18e-09 | 44 |
neural cell | 1.21e-08 | 43 |
electrically responsive cell | 7.49e-07 | 39 |
electrically active cell | 7.49e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.61e-14 | 75 |
central nervous system | 7.46e-14 | 73 |
neurectoderm | 3.09e-13 | 64 |
neural plate | 3.09e-13 | 64 |
presumptive neural plate | 3.09e-13 | 64 |
ectoderm-derived structure | 1.51e-12 | 95 |
ectoderm | 1.51e-12 | 95 |
presumptive ectoderm | 1.51e-12 | 95 |
regional part of nervous system | 3.31e-11 | 54 |
ecto-epithelium | 6.98e-10 | 73 |
neural tube | 7.96e-10 | 52 |
neural rod | 7.96e-10 | 52 |
future spinal cord | 7.96e-10 | 52 |
neural keel | 7.96e-10 | 52 |
gray matter | 9.78e-10 | 34 |
pre-chordal neural plate | 2.54e-09 | 49 |
brain | 1.78e-07 | 47 |
future brain | 1.78e-07 | 47 |
regional part of brain | 3.67e-07 | 46 |
anterior neural tube | 3.69e-07 | 40 |
brain grey matter | 6.18e-07 | 29 |
regional part of telencephalon | 6.18e-07 | 29 |
telencephalon | 6.18e-07 | 29 |
regional part of forebrain | 8.08e-07 | 39 |
forebrain | 8.08e-07 | 39 |
future forebrain | 8.08e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.