FFCP PHASE1:Mm9::chr15:91502663..91502681,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=181|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:91502663..91502681,+|id=chr15:91502663..91502681,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!4.68e-15!66;UBERON:0003914!9.13e-11!47;UBERON:0005177!1.20e-09!85;UBERON:0005172!2.45e-09!49;UBERON:0005173!2.45e-09!49;UBERON:0002417!2.45e-09!49;UBERON:0000916!2.45e-09!49;UBERON:0002048!4.99e-09!14;UBERON:0000117!4.99e-09!14;UBERON:0000171!4.99e-09!14;UBERON:0000170!4.99e-09!14;UBERON:0005597!4.99e-09!14;UBERON:0000118!4.99e-09!14;UBERON:0002107!6.16e-08!22;UBERON:0007499!6.16e-08!22;UBERON:0006925!6.16e-08!22;UBERON:0009497!6.16e-08!22;UBERON:0000015!6.16e-08!22;UBERON:0002423!6.16e-08!22;UBERON:0006235!6.16e-08!22;UBERON:0008835!6.16e-08!22;UBERON:0003894!6.16e-08!22;UBERON:0004161!6.16e-08!22;UBERON:0008836!6.16e-08!22;UBERON:0000926!9.59e-08!193;UBERON:0004120!9.59e-08!193;UBERON:0006603!9.59e-08!193;UBERON:0000466!1.16e-07!79;UBERON:0009854!2.36e-07!23;UBERON:0009856!2.36e-07!23;UBERON:0001048!2.69e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0009569,2.29e-14,66;UBERON:0002048,4.99e-13,14;UBERON:0000117,4.99e-13,14;UBERON:0000171,4.99e-13,14;UBERON:0000170,4.99e-13,14;UBERON:0005597,4.99e-13,14;UBERON:0000118,4.99e-13,14;UBERON:0005177,2.59e-11,79;UBERON:0005153,1.67e-10,17;UBERON:0005178,1.67e-10,17;UBERON:0005181,1.67e-10,17;UBERON:0002224,1.67e-10,17;UBERON:0000915,1.67e-10,17;UBERON:0008947,1.67e-10,17;UBERON:0003258,1.67e-10,17;UBERON:0002100,2.03e-09,90;UBERON:0005157,9.72e-09,20;UBERON:0003914,5.04e-08,47;UBERON:0005911,7.47e-08,69;UBERON:0000025,2.46e-07,114;UBERON:0002107,2.53e-07,22;UBERON:0007499,2.53e-07,22;UBERON:0006925,2.53e-07,22;UBERON:0009497,2.53e-07,22;UBERON:0000015,2.53e-07,22;UBERON:0002423,2.53e-07,22;UBERON:0006235,2.53e-07,22;UBERON:0008835,2.53e-07,22;UBERON:0003894,2.53e-07,22;UBERON:0004161,2.53e-07,22;UBERON:0008836,2.53e-07,22;UBERON:0009854,5.92e-07,23;UBERON:0009856,5.92e-07,23|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0.0755715601067855,22.6094301187309,2.58127163094416,0,0,0.649776417447669,0,2.10666630197628,0,0,0,0,0,0,0,0,0,0,4.90990682791958,0,0.29688427812965,0,0,0,0,0.117588707135705,0.125666591329675,0,0.289198713839823,0,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,7.99679052368601,0,0,0.180062129805349,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0.234526059981096,0.36012412292203,0.473489471170421,0.590292695242212,0.308534225774757,0,0.268273401399619,0.350296027101508,0.658239399653922,3.2833492815819,3.08061476274252,2.04679982395465,1.53685080703735,3.89198614405078,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0.397912944082302,0.38992817423824,0,0,0,0,0.114248512609729,0,0.407302655690628,0.581857461502877,0.841629838683823,1.89709611372772,6.9376769550413,4.86696056308262,6.54004968785543,0.296452627087149,0.667380422864376,0.589676985339609,0,0.405720242777006,0,0.50925170356284,0.863088412352432,1.29708181420028,0,4.31304619582064,1.11642284300551,1.24815069245824,1.51547326768267,0.896987067609561,1.92977408545347,5.17308932466493,0,0,1.01847051465113,0.469380496577004,0.502518772325447,0.952174563544055,0.975668239288994,2.99506773801763,3.32197034473162,2.23236676120482,5.24362607090362,3.62638461918381,5.35201516751593,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0,1.40803024838226,0.21183207086382,0,0,0,0,0,0,0.291480836629851,0,0,0.412773735926445,0.370389054739423,0,0.27338845544205,0,0,0,0,0,0,0,0,0.209088296014469,0.436725127492355,0.134864346384821,0.165306911450672,0,0,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.258319646955462,0,0.352071715937262,0.2604087696879,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0,0.505394423527595,0,0.188626341386076,0.0936415074698824,0.448176066834085,0.287177344778066,0,0.347652977834566,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.715308569841963,0.290692833264657,0.0941093804153306,0,0.182927972872773,0.263069711437843,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.385813221962283,0,0,0.429742108096597,0,0.441182838239031,0.231867835620421|short_description=p@chr15:91502663..91502681,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=181 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:91502663..91502681,+ | |||
|id=chr15:91502663..91502681,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!4.68e-15!66;UBERON:0003914!9.13e-11!47;UBERON:0005177!1.20e-09!85;UBERON:0005172!2.45e-09!49;UBERON:0005173!2.45e-09!49;UBERON:0002417!2.45e-09!49;UBERON:0000916!2.45e-09!49;UBERON:0002048!4.99e-09!14;UBERON:0000117!4.99e-09!14;UBERON:0000171!4.99e-09!14;UBERON:0000170!4.99e-09!14;UBERON:0005597!4.99e-09!14;UBERON:0000118!4.99e-09!14;UBERON:0002107!6.16e-08!22;UBERON:0007499!6.16e-08!22;UBERON:0006925!6.16e-08!22;UBERON:0009497!6.16e-08!22;UBERON:0000015!6.16e-08!22;UBERON:0002423!6.16e-08!22;UBERON:0006235!6.16e-08!22;UBERON:0008835!6.16e-08!22;UBERON:0003894!6.16e-08!22;UBERON:0004161!6.16e-08!22;UBERON:0008836!6.16e-08!22;UBERON:0000926!9.59e-08!193;UBERON:0004120!9.59e-08!193;UBERON:0006603!9.59e-08!193;UBERON:0000466!1.16e-07!79;UBERON:0009854!2.36e-07!23;UBERON:0009856!2.36e-07!23;UBERON:0001048!2.69e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009569,2.29e-14,66;UBERON:0002048,4.99e-13,14;UBERON:0000117,4.99e-13,14;UBERON:0000171,4.99e-13,14;UBERON:0000170,4.99e-13,14;UBERON:0005597,4.99e-13,14;UBERON:0000118,4.99e-13,14;UBERON:0005177,2.59e-11,79;UBERON:0005153,1.67e-10,17;UBERON:0005178,1.67e-10,17;UBERON:0005181,1.67e-10,17;UBERON:0002224,1.67e-10,17;UBERON:0000915,1.67e-10,17;UBERON:0008947,1.67e-10,17;UBERON:0003258,1.67e-10,17;UBERON:0002100,2.03e-09,90;UBERON:0005157,9.72e-09,20;UBERON:0003914,5.04e-08,47;UBERON:0005911,7.47e-08,69;UBERON:0000025,2.46e-07,114;UBERON:0002107,2.53e-07,22;UBERON:0007499,2.53e-07,22;UBERON:0006925,2.53e-07,22;UBERON:0009497,2.53e-07,22;UBERON:0000015,2.53e-07,22;UBERON:0002423,2.53e-07,22;UBERON:0006235,2.53e-07,22;UBERON:0008835,2.53e-07,22;UBERON:0003894,2.53e-07,22;UBERON:0004161,2.53e-07,22;UBERON:0008836,2.53e-07,22;UBERON:0009854,5.92e-07,23;UBERON:0009856,5.92e-07,23 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0.0755715601067855,22.6094301187309,2.58127163094416,0,0,0.649776417447669,0,2.10666630197628,0,0,0,0,0,0,0,0,0,0,4.90990682791958,0,0.29688427812965,0,0,0,0,0.117588707135705,0.125666591329675,0,0.289198713839823,0,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,7.99679052368601,0,0,0.180062129805349,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0.234526059981096,0.36012412292203,0.473489471170421,0.590292695242212,0.308534225774757,0,0.268273401399619,0.350296027101508,0.658239399653922,3.2833492815819,3.08061476274252,2.04679982395465,1.53685080703735,3.89198614405078,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0.397912944082302,0.38992817423824,0,0,0,0,0.114248512609729,0,0.407302655690628,0.581857461502877,0.841629838683823,1.89709611372772,6.9376769550413,4.86696056308262,6.54004968785543,0.296452627087149,0.667380422864376,0.589676985339609,0,0.405720242777006,0,0.50925170356284,0.863088412352432,1.29708181420028,0,4.31304619582064,1.11642284300551,1.24815069245824,1.51547326768267,0.896987067609561,1.92977408545347,5.17308932466493,0,0,1.01847051465113,0.469380496577004,0.502518772325447,0.952174563544055,0.975668239288994,2.99506773801763,3.32197034473162,2.23236676120482,5.24362607090362,3.62638461918381,5.35201516751593,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0,1.40803024838226,0.21183207086382,0,0,0,0,0,0,0.291480836629851,0,0,0.412773735926445,0.370389054739423,0,0.27338845544205,0,0,0,0,0,0,0,0,0.209088296014469,0.436725127492355,0.134864346384821,0.165306911450672,0,0,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.258319646955462,0,0.352071715937262,0.2604087696879,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0,0.505394423527595,0,0.188626341386076,0.0936415074698824,0.448176066834085,0.287177344778066,0,0.347652977834566,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.715308569841963,0.290692833264657,0.0941093804153306,0,0.182927972872773,0.263069711437843,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.385813221962283,0,0,0.429742108096597,0,0.441182838239031,0.231867835620421 | |||
|short_description=p@chr15:91502663..91502681,+ | |||
}} |
Revision as of 11:37, 13 September 2013
Short description: | p@chr15:91502663..91502681, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:91502663..91502681, + |
Coexpression cluster: | MCL_coexpression_mm9:181 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subdivision of trunk | 2.29e-14 | 66 |
lung | 4.99e-13 | 14 |
respiratory tube | 4.99e-13 | 14 |
respiration organ | 4.99e-13 | 14 |
pair of lungs | 4.99e-13 | 14 |
lung primordium | 4.99e-13 | 14 |
lung bud | 4.99e-13 | 14 |
trunk region element | 2.59e-11 | 79 |
epithelial bud | 1.67e-10 | 17 |
thoracic cavity element | 1.67e-10 | 17 |
thoracic segment organ | 1.67e-10 | 17 |
thoracic cavity | 1.67e-10 | 17 |
thoracic segment of trunk | 1.67e-10 | 17 |
respiratory primordium | 1.67e-10 | 17 |
endoderm of foregut | 1.67e-10 | 17 |
trunk | 2.03e-09 | 90 |
epithelial fold | 9.72e-09 | 20 |
epithelial tube | 5.04e-08 | 47 |
endo-epithelium | 7.47e-08 | 69 |
tube | 2.46e-07 | 114 |
liver | 2.53e-07 | 22 |
epithelial sac | 2.53e-07 | 22 |
digestive gland | 2.53e-07 | 22 |
epithelium of foregut-midgut junction | 2.53e-07 | 22 |
anatomical boundary | 2.53e-07 | 22 |
hepatobiliary system | 2.53e-07 | 22 |
foregut-midgut junction | 2.53e-07 | 22 |
hepatic diverticulum | 2.53e-07 | 22 |
liver primordium | 2.53e-07 | 22 |
septum transversum | 2.53e-07 | 22 |
liver bud | 2.53e-07 | 22 |
digestive tract diverticulum | 5.92e-07 | 23 |
sac | 5.92e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.