Personal tools

FFCP PHASE1:Mm9::chr15:97923705..97923725,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=223870|HGNC=|MCL_coexpression_id=0|UniProt=P59110|association_with_transcript=110bp_to_ENSMUST00000044189,uc007xls.2,uc007xlt.2,uc007xlu.2_5end|description=CAGE_peak_5_at_Senp1_5end|id=chr15:97923705..97923725,-|ontology_enrichment_celltype=CL:0000540!4.21e-07!33;CL:0000047!4.21e-07!33;CL:0000031!4.21e-07!33;CL:0000404!4.21e-07!33|ontology_enrichment_celltype_v019_2=CL:0000540,3.20e-09,33;CL:0000047,3.20e-09,33;CL:0000031,3.20e-09,33;CL:0000404,3.20e-09,33;CL:0000117,6.07e-07,23;CL:0000337,6.07e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=2.08193501236232,0.348975407639361,0.909998478779072,0,0,1.84667199103079,0.700837921786577,0.258246646883153,0.563154888606667,0.234064526321993,0.34243593645101,0.478632953972018,0.856003649656029,0.34968160967599,0.666219523631325,0.607425802169478,0,0.473193248037357,0.548457734422955,0,2.55129870453209,0.595745707205312,0.522399578277871,0.799962113967033,0,0.57423196411502,0.86152399231815,1.29282739611533,0.950117097281869,1.00812051903972,1.10865255327652,0,1.23012957516914,0,0.577703239502549,1.99481574430191,1.22501613757421,0.418531630736908,2.3440060335714,1.57057123192139,0,0.683045484958446,0.485510353031154,0.251793635951155,0.709638518536602,0.550640256485045,0.782391344348039,0,0.439372365468944,0.388859798148567,0.699932108126813,0,0.167782606057736,0,0,0.257259436035947,0.286533439938757,0,1.21389876515759,0,0,0,1.77858959222228,0.449949858640699,0,0,0.299600110518405,0.384218305321555,1.24427534770173,1.21505344498522,1.68259969081106,1.14260393761521,1.54607978666129,1.34739879136449,1.53352753629178,1.83843757322004,2.20231761998777,1.40456071893706,1.0752457327937,2.37395317914349,1.9212405156506,1.04182674111352,0.279182999001381,1.68828783009504,0.916789486660861,0.589257170947335,1.28134512719193,1.86399445825301,0.908714319998209,1.20914496170857,0.579728977403356,0,0,0,0,0.448026887097336,0.842666520790511,1.70430322578058,1.55871602761721,1.41335829804136,1.40843419776681,0,2.54805239706646,7.11066703153331,0.216491041011214,0.506719730950197,1.01104889002957,0.91347103775248,0.776813650941515,0.445326417194474,0.867426633830679,0.304465478312141,0,0.452167921657868,0.823120949949934,0.628332956648377,0.741584903203122,0.578397427679647,0.884610551949874,0.808834249737046,1.76673214768315,0,0,1.17112318804619,1.25668024088073,0.255457055208591,0.838705871541442,0.599902730993408,0.889491589511453,0.449371918214468,0.457500602818626,0.753926112677186,0.347648640384553,0,0.62336413367868,0.486723789203273,0.916554274652847,0.870848794270651,0.252722758433675,0.841767423545896,1.56144531555244,1.37941262660084,1.44049703844279,1.05493372485001,1.08858398642125,0.512454881139399,1.40552586839593,0.517406741478031,2.37124792226126,1.89106080167819,1.58356011747554,0.876782929710299,0.556094498451196,0.348252166522167,0.823128545631774,1.19420560091096,0,0,0.852490498186778,0.828503090142008,0.938104239924385,0.36012412292203,0.23674473558521,0.590292695242212,1.07986979021165,0,1.3413670069981,0.467061369468678,1.15191894939436,0.164167464079095,0.729619285912702,0.146199987425332,0,0.402619256281115,0.210289948564127,1.3377599609307,0,1.05780226665418,1.70630600428187,1.62565670302307,2.31961430379768,0.605050573870028,0.22237804384487,0.570676878337677,0.474529061544512,0.823494773620054,0,0.198956472041151,0.779856348476481,0.898819408654221,1.29682829924817,0.995706366271836,0.948339504765408,1.02823661348756,1.1270773567308,1.01825663922657,0.775809948670503,0.701358198903186,1.07502113111237,0.147610147979602,0.627994911365499,0.493588655687202,0.592905254174298,2.00214126859313,1.37591296579242,1.12431056192427,2.02860121388503,0.964708639009667,1.52775511068852,1.15078454980324,0.972811360650212,0.823684239564244,0,0,0.936113019343682,0.757736633841335,0.358794827043824,0.482443521363367,0.923765950833023,0.757965647081939,1.95557971730431,1.01847051465113,0.704070744865506,0.335012514883631,0.476087281772027,1.17080188714679,0.472905432318573,1.10732344824387,1.11618338060241,0.655453258862952,1.38147985492716,1.01254341007058,0,0.54390568381871,0.983528546038072,1.10374698521893,0.321101179975584,0.703270119553219,0.655739781506702,1.26235463602186,1.26203287766503,1.17131623288992,0.861693590931196,1.91175038362042,2.00518806674155,1.98153571552183,1.61924280669958,0.876767573733936,0.395287777946524,0.321321316421807,0.851640511249612,0.534196811001766,1.14020871547503,0.989820737835213,1.32745138339963,0.485561272309963,0.906970670894253,1.13163047853539,0,0.614870295887855,1.29214146584111,1.09060118843252,2.49548164869305,1.26414703174326,1.05418608574999,1.03135543248187,1.70219802876894,0.900305470156551,0.388076051348264,0.643011105094777,1.06404140185364,0.891844088010353,1.15184314421485,0.608929898229199,0.704015124191131,0,0,1.6488625294148,0.484393280087717,1.56813604813205,1.07435109602823,0.492422699235184,0.582961673259701,0.741701208042039,0.341741761595705,0.619160603889667,0.555583582109135,0.753473828018764,1.6403307326523,0.686334519619568,0.169978429993855,0.279902904647316,0.829199842826543,0,0.474503990371703,1.21991680276109,0.86404272657441,1.04544148007234,0.655087691238533,1.07891477107857,1.48776220305605,0.26175594198403,1.03691978633434,0.621339313086926,10.1464728963154,1.34564891439581,0.66183396182839,0.777804753376191,1.16243841129958,1.01373675294467,0.821500670520278,2.0832701575032,0.419437377702843,3.62376181239009,5.76060012515731,0.316011120628178,0.608175645870493,0.924398614483445,0.77952493786677,0.358053391334963,0.993406773906324,1.20195449519969,0.738447635872886,0.706765149637033,1.295515713135,0.604957110821043,1.16949456887703,1.15454209968395,1.16876902181569,0.906921534460845,0.887943813496259,0.717710852875806,1.34307693091263,0.772758376128762,0.375364950902364,0.73260649706906,0.428736758158132,0.501572104035363,0,0.460325236507177,1.14579102687879,0.515559547031063,0.685082519770642,2.2661816921691,0.675022500231806,0.45032120322422,0,0.51776031175182,1.3492355185943,0.399024873401031,1.70733605754134,1.45864030240976,0.838452650511929,0.919217542250071,0,0.412070114477788,0.320919209591815,0.505394423527595,0.50695859978048,0,0.749132059759059,1.28050304809739,1.60819313075717,0.476293691283074,0.811190281613988,1.35036454324594,0,0.588795680537589,1.02860775715625,0.70990322463735,1.43061713968393,0.581385666529314,0.376437521661322,0.592302255241736,0.548783918618318,0,0.679020569229309,0,0.711810108745045,1.18205378850676,0.409231043169689,0.929621047115796,1.35034627686799,1.49886346762768,0,0.644613162144895,0.956441660344217,0.661774257358546,0.695603506861264|short_description=p5@Senp1}}
|EntrezGene=223870
|HGNC=
|MCL_coexpression_id=0
|UniProt=P59110
|association_with_transcript=110bp_to_ENSMUST00000044189,uc007xls.2,uc007xlt.2,uc007xlu.2_5end
|description=CAGE_peak_5_at_Senp1_5end
|id=chr15:97923705..97923725,-
|ontology_enrichment_celltype=CL:0000540!4.21e-07!33;CL:0000047!4.21e-07!33;CL:0000031!4.21e-07!33;CL:0000404!4.21e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000540,3.20e-09,33;CL:0000047,3.20e-09,33;CL:0000031,3.20e-09,33;CL:0000404,3.20e-09,33;CL:0000117,6.07e-07,23;CL:0000337,6.07e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=2.08193501236232,0.348975407639361,0.909998478779072,0,0,1.84667199103079,0.700837921786577,0.258246646883153,0.563154888606667,0.234064526321993,0.34243593645101,0.478632953972018,0.856003649656029,0.34968160967599,0.666219523631325,0.607425802169478,0,0.473193248037357,0.548457734422955,0,2.55129870453209,0.595745707205312,0.522399578277871,0.799962113967033,0,0.57423196411502,0.86152399231815,1.29282739611533,0.950117097281869,1.00812051903972,1.10865255327652,0,1.23012957516914,0,0.577703239502549,1.99481574430191,1.22501613757421,0.418531630736908,2.3440060335714,1.57057123192139,0,0.683045484958446,0.485510353031154,0.251793635951155,0.709638518536602,0.550640256485045,0.782391344348039,0,0.439372365468944,0.388859798148567,0.699932108126813,0,0.167782606057736,0,0,0.257259436035947,0.286533439938757,0,1.21389876515759,0,0,0,1.77858959222228,0.449949858640699,0,0,0.299600110518405,0.384218305321555,1.24427534770173,1.21505344498522,1.68259969081106,1.14260393761521,1.54607978666129,1.34739879136449,1.53352753629178,1.83843757322004,2.20231761998777,1.40456071893706,1.0752457327937,2.37395317914349,1.9212405156506,1.04182674111352,0.279182999001381,1.68828783009504,0.916789486660861,0.589257170947335,1.28134512719193,1.86399445825301,0.908714319998209,1.20914496170857,0.579728977403356,0,0,0,0,0.448026887097336,0.842666520790511,1.70430322578058,1.55871602761721,1.41335829804136,1.40843419776681,0,2.54805239706646,7.11066703153331,0.216491041011214,0.506719730950197,1.01104889002957,0.91347103775248,0.776813650941515,0.445326417194474,0.867426633830679,0.304465478312141,0,0.452167921657868,0.823120949949934,0.628332956648377,0.741584903203122,0.578397427679647,0.884610551949874,0.808834249737046,1.76673214768315,0,0,1.17112318804619,1.25668024088073,0.255457055208591,0.838705871541442,0.599902730993408,0.889491589511453,0.449371918214468,0.457500602818626,0.753926112677186,0.347648640384553,0,0.62336413367868,0.486723789203273,0.916554274652847,0.870848794270651,0.252722758433675,0.841767423545896,1.56144531555244,1.37941262660084,1.44049703844279,1.05493372485001,1.08858398642125,0.512454881139399,1.40552586839593,0.517406741478031,2.37124792226126,1.89106080167819,1.58356011747554,0.876782929710299,0.556094498451196,0.348252166522167,0.823128545631774,1.19420560091096,0,0,0.852490498186778,0.828503090142008,0.938104239924385,0.36012412292203,0.23674473558521,0.590292695242212,1.07986979021165,0,1.3413670069981,0.467061369468678,1.15191894939436,0.164167464079095,0.729619285912702,0.146199987425332,0,0.402619256281115,0.210289948564127,1.3377599609307,0,1.05780226665418,1.70630600428187,1.62565670302307,2.31961430379768,0.605050573870028,0.22237804384487,0.570676878337677,0.474529061544512,0.823494773620054,0,0.198956472041151,0.779856348476481,0.898819408654221,1.29682829924817,0.995706366271836,0.948339504765408,1.02823661348756,1.1270773567308,1.01825663922657,0.775809948670503,0.701358198903186,1.07502113111237,0.147610147979602,0.627994911365499,0.493588655687202,0.592905254174298,2.00214126859313,1.37591296579242,1.12431056192427,2.02860121388503,0.964708639009667,1.52775511068852,1.15078454980324,0.972811360650212,0.823684239564244,0,0,0.936113019343682,0.757736633841335,0.358794827043824,0.482443521363367,0.923765950833023,0.757965647081939,1.95557971730431,1.01847051465113,0.704070744865506,0.335012514883631,0.476087281772027,1.17080188714679,0.472905432318573,1.10732344824387,1.11618338060241,0.655453258862952,1.38147985492716,1.01254341007058,0,0.54390568381871,0.983528546038072,1.10374698521893,0.321101179975584,0.703270119553219,0.655739781506702,1.26235463602186,1.26203287766503,1.17131623288992,0.861693590931196,1.91175038362042,2.00518806674155,1.98153571552183,1.61924280669958,0.876767573733936,0.395287777946524,0.321321316421807,0.851640511249612,0.534196811001766,1.14020871547503,0.989820737835213,1.32745138339963,0.485561272309963,0.906970670894253,1.13163047853539,0,0.614870295887855,1.29214146584111,1.09060118843252,2.49548164869305,1.26414703174326,1.05418608574999,1.03135543248187,1.70219802876894,0.900305470156551,0.388076051348264,0.643011105094777,1.06404140185364,0.891844088010353,1.15184314421485,0.608929898229199,0.704015124191131,0,0,1.6488625294148,0.484393280087717,1.56813604813205,1.07435109602823,0.492422699235184,0.582961673259701,0.741701208042039,0.341741761595705,0.619160603889667,0.555583582109135,0.753473828018764,1.6403307326523,0.686334519619568,0.169978429993855,0.279902904647316,0.829199842826543,0,0.474503990371703,1.21991680276109,0.86404272657441,1.04544148007234,0.655087691238533,1.07891477107857,1.48776220305605,0.26175594198403,1.03691978633434,0.621339313086926,10.1464728963154,1.34564891439581,0.66183396182839,0.777804753376191,1.16243841129958,1.01373675294467,0.821500670520278,2.0832701575032,0.419437377702843,3.62376181239009,5.76060012515731,0.316011120628178,0.608175645870493,0.924398614483445,0.77952493786677,0.358053391334963,0.993406773906324,1.20195449519969,0.738447635872886,0.706765149637033,1.295515713135,0.604957110821043,1.16949456887703,1.15454209968395,1.16876902181569,0.906921534460845,0.887943813496259,0.717710852875806,1.34307693091263,0.772758376128762,0.375364950902364,0.73260649706906,0.428736758158132,0.501572104035363,0,0.460325236507177,1.14579102687879,0.515559547031063,0.685082519770642,2.2661816921691,0.675022500231806,0.45032120322422,0,0.51776031175182,1.3492355185943,0.399024873401031,1.70733605754134,1.45864030240976,0.838452650511929,0.919217542250071,0,0.412070114477788,0.320919209591815,0.505394423527595,0.50695859978048,0,0.749132059759059,1.28050304809739,1.60819313075717,0.476293691283074,0.811190281613988,1.35036454324594,0,0.588795680537589,1.02860775715625,0.70990322463735,1.43061713968393,0.581385666529314,0.376437521661322,0.592302255241736,0.548783918618318,0,0.679020569229309,0,0.711810108745045,1.18205378850676,0.409231043169689,0.929621047115796,1.35034627686799,1.49886346762768,0,0.644613162144895,0.956441660344217,0.661774257358546,0.695603506861264
|short_description=p5@Senp1
}}

Revision as of 11:48, 13 September 2013

Short description:p5@Senp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Senp1_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 110bp_to_ENSMUST00000044189, uc007xls.2, uc007xlt.2, uc007xlu.2_5end
EntrezGene:Senp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Senp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.92
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F91.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D82.32
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D51.08
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F82.00
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D72.03
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H31.57
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H11.64
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A91.49
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G510.15
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I42.08
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H33.62
testis, neonate N30.CNhs11130.1391-42E25.76
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D31.30
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A21.17
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G21.17
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron3.20e-0933
neuronal stem cell3.20e-0933
neuroblast3.20e-0933
electrically signaling cell3.20e-0933
CNS neuron (sensu Vertebrata)6.07e-0723
neuroblast (sensu Vertebrata)6.07e-0723







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr15:97923705..97923725,-&oldid=2931925"