FFCP PHASE1:Mm9::chr16:19236953..19236959,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=63|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:19236953..19236959,-|id=chr16:19236953..19236959,-|ontology_enrichment_celltype=CL:0000553!3.33e-14!6;CL:0000556!3.33e-14!6;CL:0000050!1.60e-09!9;CL:0000414!8.24e-08!11|ontology_enrichment_celltype_v019_2=CL:0000553,1.35e-22,6;CL:0000556,1.35e-22,6;CL:0000945,1.86e-15,1;CL:0000236,1.86e-15,1;CL:0000826,1.86e-15,1;CL:0000050,2.36e-15,9;CL:0000839,7.19e-11,13;CL:0002031,7.56e-10,25;CL:0000763,5.75e-09,16;CL:0000988,8.38e-08,32;CL:0002032,8.38e-08,32;CL:0000037,8.38e-08,32;CL:0000837,8.38e-08,32;CL:0000049,1.17e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002465!2.04e-15!3;UBERON:0001962!2.13e-10!2;UBERON:0001961!2.13e-10!2;UBERON:0001744!2.13e-10!2;UBERON:0002193!3.82e-09!48;UBERON:0003887!3.85e-08!10;UBERON:0002106!5.11e-08!6;UBERON:0004457!5.11e-08!6;UBERON:0000042!5.11e-08!6;UBERON:0004854!5.11e-08!6;UBERON:0009034!5.11e-08!6;UBERON:0002095!5.11e-08!6;UBERON:0004782!5.11e-08!6;UBERON:0003281!5.11e-08!6;UBERON:0009664!5.11e-08!6;UBERON:0002296!5.11e-08!6;UBERON:0005602!5.11e-08!6;UBERON:0001179!5.11e-08!6;UBERON:0006293!5.11e-08!6;UBERON:0004923!7.11e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000029,3.44e-16,1;UBERON:0001097,3.44e-16,1;UBERON:0003968,3.44e-16,1;UBERON:0001467,3.44e-16,1;UBERON:0002371,5.75e-09,16;UBERON:0002193,4.79e-08,48;UBERON:0002405,4.79e-08,48|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0,0,4.10100814965709,3.29074640653773,2.97072756258621,0,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1700805314171,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,1.19609616558497,0,0,0,0.410082683163076,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr16:19236953..19236959,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=63 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:19236953..19236959,- | |||
|id=chr16:19236953..19236959,- | |||
|ontology_enrichment_celltype=CL:0000553!3.33e-14!6;CL:0000556!3.33e-14!6;CL:0000050!1.60e-09!9;CL:0000414!8.24e-08!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.35e-22,6;CL:0000556,1.35e-22,6;CL:0000945,1.86e-15,1;CL:0000236,1.86e-15,1;CL:0000826,1.86e-15,1;CL:0000050,2.36e-15,9;CL:0000839,7.19e-11,13;CL:0002031,7.56e-10,25;CL:0000763,5.75e-09,16;CL:0000988,8.38e-08,32;CL:0002032,8.38e-08,32;CL:0000037,8.38e-08,32;CL:0000837,8.38e-08,32;CL:0000049,1.17e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!2.04e-15!3;UBERON:0001962!2.13e-10!2;UBERON:0001961!2.13e-10!2;UBERON:0001744!2.13e-10!2;UBERON:0002193!3.82e-09!48;UBERON:0003887!3.85e-08!10;UBERON:0002106!5.11e-08!6;UBERON:0004457!5.11e-08!6;UBERON:0000042!5.11e-08!6;UBERON:0004854!5.11e-08!6;UBERON:0009034!5.11e-08!6;UBERON:0002095!5.11e-08!6;UBERON:0004782!5.11e-08!6;UBERON:0003281!5.11e-08!6;UBERON:0009664!5.11e-08!6;UBERON:0002296!5.11e-08!6;UBERON:0005602!5.11e-08!6;UBERON:0001179!5.11e-08!6;UBERON:0006293!5.11e-08!6;UBERON:0004923!7.11e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,3.44e-16,1;UBERON:0001097,3.44e-16,1;UBERON:0003968,3.44e-16,1;UBERON:0001467,3.44e-16,1;UBERON:0002371,5.75e-09,16;UBERON:0002193,4.79e-08,48;UBERON:0002405,4.79e-08,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0,0,4.10100814965709,3.29074640653773,2.97072756258621,0,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1700805314171,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,1.19609616558497,0,0,0,0.410082683163076,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:19236953..19236959,- | |||
}} |
Revision as of 12:08, 13 September 2013
Short description: | p@chr16:19236953..19236959, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:19236953..19236959, - |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.35e-22 | 6 |
megakaryocyte | 1.35e-22 | 6 |
lymphocyte of B lineage | 1.86e-15 | 1 |
B cell | 1.86e-15 | 1 |
pro-B cell | 1.86e-15 | 1 |
megakaryocyte-erythroid progenitor cell | 2.36e-15 | 9 |
myeloid lineage restricted progenitor cell | 7.19e-11 | 13 |
hematopoietic lineage restricted progenitor cell | 7.56e-10 | 25 |
myeloid cell | 5.75e-09 | 16 |
hematopoietic cell | 8.38e-08 | 32 |
hematopoietic oligopotent progenitor cell | 8.38e-08 | 32 |
hematopoietic stem cell | 8.38e-08 | 32 |
hematopoietic multipotent progenitor cell | 8.38e-08 | 32 |
common myeloid progenitor | 1.17e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
lymph node | 3.44e-16 | 1 |
axillary lymph node | 3.44e-16 | 1 |
peripheral lymph node | 3.44e-16 | 1 |
shoulder | 3.44e-16 | 1 |
bone marrow | 5.75e-09 | 16 |
hemolymphoid system | 4.79e-08 | 48 |
immune system | 4.79e-08 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.