FFCP PHASE1:Mm9::chr16:20426366..20426387,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=27416|HGNC=|UniProt=|association_with_transcript=9bp_to_ENSMUST00000134962_5end|description=CAGE_peak_2_at_Abcc5_5end|id=chr16:20426366..20426387,-|ontology_enrichment_celltype=CL:0000393!6.62e-12!39;CL:0000211!6.62e-12!39;CL:0000540!8.20e-12!33;CL:0000047!8.20e-12!33;CL:0000031!8.20e-12!33;CL:0000404!8.20e-12!33;CL:0002319!1.42e-11!43;CL:0000221!3.20e-11!44;CL:0000133!3.20e-11!44;CL:0000055!5.83e-11!50;CL:0000117!2.47e-08!23;CL:0000337!2.47e-08!23|ontology_enrichment_celltype_v019_2=CL:0000393,6.61e-12,39;CL:0000211,6.61e-12,39;CL:0000540,8.19e-12,33;CL:0000047,8.19e-12,33;CL:0000031,8.19e-12,33;CL:0000404,8.19e-12,33;CL:0002319,1.42e-11,43;CL:0000221,3.19e-11,44;CL:0000133,3.19e-11,44;CL:0000117,2.47e-08,23;CL:0000337,2.47e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.27e-18!73;UBERON:0005743!5.27e-18!73;UBERON:0000073!6.86e-17!75;UBERON:0001016!6.86e-17!75;UBERON:0000153!1.18e-16!94;UBERON:0007811!2.57e-16!86;UBERON:0004121!3.37e-14!102;UBERON:0000924!3.37e-14!102;UBERON:0006601!3.37e-14!102;UBERON:0001049!9.24e-12!52;UBERON:0005068!9.24e-12!52;UBERON:0006241!9.24e-12!52;UBERON:0007135!9.24e-12!52;UBERON:0002346!1.87e-11!71;UBERON:0003075!1.87e-11!71;UBERON:0007284!1.87e-11!71;UBERON:0002616!4.25e-11!49;UBERON:0000955!6.37e-11!50;UBERON:0006238!6.37e-11!50;UBERON:0002020!2.20e-10!34;UBERON:0000033!1.08e-09!63;UBERON:0002791!7.37e-09!29;UBERON:0003528!7.37e-09!29;UBERON:0001893!7.37e-09!29;UBERON:0003080!1.33e-08!40;UBERON:0003056!2.11e-08!49;UBERON:0002780!3.72e-08!39;UBERON:0001890!3.72e-08!39;UBERON:0006240!3.72e-08!39;UBERON:0006562!3.88e-07!24;UBERON:0001557!3.88e-07!24;UBERON:0001042!3.88e-07!24;UBERON:0008814!3.88e-07!24;UBERON:0009145!3.88e-07!24;UBERON:0002370!4.45e-07!23;UBERON:0000974!4.45e-07!23;UBERON:0004807!4.45e-07!23;UBERON:0005058!4.45e-07!23;UBERON:0003351!4.45e-07!23;UBERON:0009113!4.45e-07!23;UBERON:0003295!4.45e-07!23;UBERON:0009722!4.45e-07!23;UBERON:0005562!4.45e-07!23;UBERON:0007690!4.45e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.26e-18,73;UBERON:0001016,6.85e-17,75;UBERON:0004121,4.89e-15,95;UBERON:0000924,4.89e-15,95;UBERON:0006601,4.89e-15,95;UBERON:0000073,1.09e-12,54;UBERON:0002346,1.60e-12,64;UBERON:0003075,1.60e-12,64;UBERON:0007284,1.60e-12,64;UBERON:0010314,6.44e-12,92;UBERON:0001049,9.23e-12,52;UBERON:0005068,9.23e-12,52;UBERON:0006241,9.23e-12,52;UBERON:0007135,9.23e-12,52;UBERON:0010371,1.58e-10,73;UBERON:0002020,2.20e-10,34;UBERON:0002616,1.11e-09,46;UBERON:0000955,1.61e-09,47;UBERON:0006238,1.61e-09,47;UBERON:0003528,7.37e-09,29;UBERON:0002791,7.37e-09,29;UBERON:0001893,7.37e-09,29;UBERON:0003080,1.33e-08,40;UBERON:0003056,2.11e-08,49;UBERON:0002780,3.72e-08,39;UBERON:0001890,3.72e-08,39;UBERON:0006240,3.72e-08,39;UBERON:0006562,3.88e-07,24;UBERON:0001557,3.88e-07,24;UBERON:0001042,3.88e-07,24;UBERON:0008814,3.88e-07,24;UBERON:0009145,3.88e-07,24;UBERON:0002370,4.45e-07,23;UBERON:0000974,4.45e-07,23;UBERON:0004807,4.45e-07,23;UBERON:0005058,4.45e-07,23;UBERON:0003351,4.45e-07,23;UBERON:0009113,4.45e-07,23;UBERON:0003295,4.45e-07,23;UBERON:0009722,4.45e-07,23;UBERON:0005562,4.45e-07,23;UBERON:0007690,4.45e-07,23|phase1_expression=7.8472935081349,5.58360652222978,4.54999239389536,0.90739263392049,1.50268718983904,5.03637815735669,3.27057696833736,6.32704284863724,19.7104211012333,19.8954847373694,3.08192342805909,3.90883579077148,7.01922992717943,8.74204024189974,2.33176833270964,3.64455481301687,5.59649502502517,1.73504190947031,3.29074640653773,2.54633791078818,10.1201515279773,2.48227378002213,3.39559725880616,4.63978026100879,5.50582274561208,2.8711598205751,3.87685796543167,3.44753972297422,1.14014051673824,0.252030129759931,1.33038306393183,6.98533740805594,9.22597181376855,0,2.02196133825892,2.65975432573588,3.67504841272264,0.837063261473815,0,0,0.588231488031014,1.36609096991689,0.485510353031154,19.1363163322877,18.4506014819517,28.0826530807373,30.5132624295735,8.72100625521786,20.6505011770404,39.080409713931,17.6382891247957,7.18762821824858,2.34895648480831,21.035502118329,31.9289109185341,3.8588915405392,6.30373567865265,12.3761302146586,17.601532094785,19.5726662330652,17.1134478946668,20.6695164562171,17.7858959222228,0,3.9554654502679,2.8419204597844,11.3848041996994,9.98967593836042,15.3460626216547,11.2054928815303,10.3059231062177,15.1395021734016,11.2642955885323,8.81933754347669,14.0892842396807,18.3843757322004,26.4278114398533,22.472971502993,27.4955694528676,19.1235117208781,23.1463738314096,19.2737947106001,24.2889209131201,27.0126052815206,26.586895113165,22.3917724959987,18.0812034614861,22.3679334990361,3.25622631332691,6.49915416918356,14.7830889237856,0,0,0,0.649776417447669,0,8.28622078777336,12.2709832256202,9.87186817490901,8.12681021373782,7.88723150749411,37.2146784501522,58.6052051325285,14.2213340630666,2.38140145112336,2.78695852022608,2.02209778005913,3.19714863213368,3.88406825470758,11.7269289861212,9.1947223186052,9.74289530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| ||
|EntrezGene=27416 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=9bp_to_ENSMUST00000134962_5end | |||
|description=CAGE_peak_2_at_Abcc5_5end | |||
|id=chr16:20426366..20426387,- | |||
|ontology_enrichment_celltype=CL:0000393!6.62e-12!39;CL:0000211!6.62e-12!39;CL:0000540!8.20e-12!33;CL:0000047!8.20e-12!33;CL:0000031!8.20e-12!33;CL:0000404!8.20e-12!33;CL:0002319!1.42e-11!43;CL:0000221!3.20e-11!44;CL:0000133!3.20e-11!44;CL:0000055!5.83e-11!50;CL:0000117!2.47e-08!23;CL:0000337!2.47e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,6.61e-12,39;CL:0000211,6.61e-12,39;CL:0000540,8.19e-12,33;CL:0000047,8.19e-12,33;CL:0000031,8.19e-12,33;CL:0000404,8.19e-12,33;CL:0002319,1.42e-11,43;CL:0000221,3.19e-11,44;CL:0000133,3.19e-11,44;CL:0000117,2.47e-08,23;CL:0000337,2.47e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.27e-18!73;UBERON:0005743!5.27e-18!73;UBERON:0000073!6.86e-17!75;UBERON:0001016!6.86e-17!75;UBERON:0000153!1.18e-16!94;UBERON:0007811!2.57e-16!86;UBERON:0004121!3.37e-14!102;UBERON:0000924!3.37e-14!102;UBERON:0006601!3.37e-14!102;UBERON:0001049!9.24e-12!52;UBERON:0005068!9.24e-12!52;UBERON:0006241!9.24e-12!52;UBERON:0007135!9.24e-12!52;UBERON:0002346!1.87e-11!71;UBERON:0003075!1.87e-11!71;UBERON:0007284!1.87e-11!71;UBERON:0002616!4.25e-11!49;UBERON:0000955!6.37e-11!50;UBERON:0006238!6.37e-11!50;UBERON:0002020!2.20e-10!34;UBERON:0000033!1.08e-09!63;UBERON:0002791!7.37e-09!29;UBERON:0003528!7.37e-09!29;UBERON:0001893!7.37e-09!29;UBERON:0003080!1.33e-08!40;UBERON:0003056!2.11e-08!49;UBERON:0002780!3.72e-08!39;UBERON:0001890!3.72e-08!39;UBERON:0006240!3.72e-08!39;UBERON:0006562!3.88e-07!24;UBERON:0001557!3.88e-07!24;UBERON:0001042!3.88e-07!24;UBERON:0008814!3.88e-07!24;UBERON:0009145!3.88e-07!24;UBERON:0002370!4.45e-07!23;UBERON:0000974!4.45e-07!23;UBERON:0004807!4.45e-07!23;UBERON:0005058!4.45e-07!23;UBERON:0003351!4.45e-07!23;UBERON:0009113!4.45e-07!23;UBERON:0003295!4.45e-07!23;UBERON:0009722!4.45e-07!23;UBERON:0005562!4.45e-07!23;UBERON:0007690!4.45e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.26e-18,73;UBERON:0001016,6.85e-17,75;UBERON:0004121,4.89e-15,95;UBERON:0000924,4.89e-15,95;UBERON:0006601,4.89e-15,95;UBERON:0000073,1.09e-12,54;UBERON:0002346,1.60e-12,64;UBERON:0003075,1.60e-12,64;UBERON:0007284,1.60e-12,64;UBERON:0010314,6.44e-12,92;UBERON:0001049,9.23e-12,52;UBERON:0005068,9.23e-12,52;UBERON:0006241,9.23e-12,52;UBERON:0007135,9.23e-12,52;UBERON:0010371,1.58e-10,73;UBERON:0002020,2.20e-10,34;UBERON:0002616,1.11e-09,46;UBERON:0000955,1.61e-09,47;UBERON:0006238,1.61e-09,47;UBERON:0003528,7.37e-09,29;UBERON:0002791,7.37e-09,29;UBERON:0001893,7.37e-09,29;UBERON:0003080,1.33e-08,40;UBERON:0003056,2.11e-08,49;UBERON:0002780,3.72e-08,39;UBERON:0001890,3.72e-08,39;UBERON:0006240,3.72e-08,39;UBERON:0006562,3.88e-07,24;UBERON:0001557,3.88e-07,24;UBERON:0001042,3.88e-07,24;UBERON:0008814,3.88e-07,24;UBERON:0009145,3.88e-07,24;UBERON:0002370,4.45e-07,23;UBERON:0000974,4.45e-07,23;UBERON:0004807,4.45e-07,23;UBERON:0005058,4.45e-07,23;UBERON:0003351,4.45e-07,23;UBERON:0009113,4.45e-07,23;UBERON:0003295,4.45e-07,23;UBERON:0009722,4.45e-07,23;UBERON:0005562,4.45e-07,23;UBERON:0007690,4.45e-07,23 | |||
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| |||
|short_description=p2@Abcc5 | |||
}} |
Revision as of 12:09, 13 September 2013
Short description: | p2@Abcc5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Abcc5_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENSMUST00000134962_5end |
EntrezGene: | Abcc5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 6.61e-12 | 39 |
electrically active cell | 6.61e-12 | 39 |
neuron | 8.19e-12 | 33 |
neuronal stem cell | 8.19e-12 | 33 |
neuroblast | 8.19e-12 | 33 |
electrically signaling cell | 8.19e-12 | 33 |
neural cell | 1.42e-11 | 43 |
ectodermal cell | 3.19e-11 | 44 |
neurectodermal cell | 3.19e-11 | 44 |
CNS neuron (sensu Vertebrata) | 2.47e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.47e-08 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.