FFCP PHASE1:Hg19::chr4:87928105..87928126,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4299|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7135|TSSclassifier=S|UniProt=P51825|association_with_transcript=-13bp_to_ENST00000307808_5end|coexpression_cluster_id=C17|description=CAGE_peak_13_at_AFF1_5end|id=chr4:87928105..87928126,+|ontology_enrichment_celltype=CL:0000037!2.72e-13!172;CL:0000566!2.72e-13!172;CL:0002032!5.46e-12!165;CL:0000837!5.46e-12!165;CL:0000988!7.36e-12!182;CL:0000763!7.59e-12!112;CL:0000049!7.59e-12!112;CL:0000738!3.00e-11!140;CL:0000557!4.48e-11!71;CL:0002031!8.88e-11!124;CL:0000766!9.69e-11!76;CL:0000839!1.13e-10!70;CL:0002009!1.84e-08!65;CL:0002320!4.30e-08!365;CL:0002087!6.08e-08!119;CL:0000134!8.76e-08!358;CL:0002194!1.10e-07!63;CL:0000576!1.10e-07!63;CL:0000040!1.10e-07!63;CL:0000559!1.10e-07!63|ontology_enrichment_celltype_v019=CL:0000860;6.28e-11;33!CL:0002057;6.28e-11;33!CL:0000473;2.69e-10;39!CL:0000234;2.69e-10;39!CL:0000576;7.19e-08;48!CL:0000766;1.52e-07;69|ontology_enrichment_celltype_v019_2=CL:0000766,1.56e-19,72;CL:0000557,2.97e-19,67;CL:0000763,5.55e-19,108;CL:0000049,5.55e-19,108;CL:0000037,8.05e-19,168;CL:0000839,1.39e-18,66;CL:0000988,3.74e-18,177;CL:0002032,2.52e-17,161;CL:0000837,2.52e-17,161;CL:0000738,2.94e-17,136;CL:0002031,1.79e-16,120;CL:0002009,7.36e-15,61;CL:0002194,1.52e-13,59;CL:0000576,1.52e-13,59;CL:0000040,1.52e-13,59;CL:0000559,1.52e-13,59;CL:0002087,1.95e-11,115;CL:0000473,1.01e-09,48;CL:0000234,1.01e-09,48;CL:0000860,1.35e-08,42;CL:0002057,1.35e-08,42;CL:0002320,2.78e-08,361;CL:0000134,4.22e-08,354|ontology_enrichment_development_v019=CL:0002057;5.55e-07;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!5.05e-14!112;UBERON:0007023!1.20e-13!115;UBERON:0002405!6.56e-13!115;UBERON:0002390!9.26e-13!102;UBERON:0003061!9.26e-13!102;UBERON:0002371!2.31e-11!80;UBERON:0001474!8.40e-10!86;UBERON:0004765!4.84e-08!101;UBERON:0001434!4.84e-08!101;UBERON:0002384!2.62e-07!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.45e-19,98;UBERON:0003061,1.45e-19,98;UBERON:0002371,1.33e-18,76;UBERON:0002193,4.17e-18,108;UBERON:0002405,2.39e-17,93;UBERON:0001474,1.10e-16,82;UBERON:0004765,2.37e-14,90;UBERON:0001434,1.89e-12,100;UBERON:0003081,6.14e-08,203;UBERON:0007023,1.12e-07,114;UBERON:0002384,1.26e-07,371|phase1_expression=2.36181893051724,1.2846031433459,3.52386010239928,1.0007329835313,0.893922188854576,0.872338524100369,2.53299878168311,0.631719873426831,0.261185628199839,0.245733936501509,0.697801167972428,0.436882744260345,0.263766978228454,0.37129905888014,0.331397375727916,0,0,0,0.487932798790507,0.492484232307152,0.408001382488506,0.626909442956176,0.286235987131057,0.273748850145768,0.251085279189606,1.60468152070698,1.14940825229924,1.49550484495991,0,1.91914699048606,1.39334510984468,0,0,0,0.0774672005803016,0.710846162437108,2.05520307534393,0,0.401088894940283,1.08505435357926,2.23915474239924,0.647787332037959,2.06060454107349,1.16318591023652,3.02300754951048,1.94067248950253,1.16214518452842,1.6446715520873,1.85823822537062,3.45230870786581,4.61089271752381,3.07426898855161,0,1.93645405075148,2.70852973188684,1.69418105588344,1.91034305040492,1.79778787556068,2.14258724659632,1.60464513538047,0.639337125799041,5.93732340336089,3.19141852194611,5.54092175692502,1.16083695451434,1.13477044938228,0.622822248995575,2.76373531782418,1.5644487552606,5.2125322729228,1.21079900526674,0.736555271975129,1.89877432464531,0.422510572623884,0.212604299965044,0.419317291016752,0.44931452458598,0,0.32145117339416,0.285012743741249,0.19891667719909,0,1.75996244461323,1.09227722252426,0,0.426730222566507,0.800791974072025,1.72425731986345,0,0,0.569212969109448,2.34894875748376,1.52909291250092,3.96513985737078,3.36305137788922,0.526768169550154,2.16380747125216,2.75107533924415,0.822405995998037,1.00311897234407,0.32592226663359,0,0,0.668462741311041,0.589211814949674,0.221533894583621,0,0.768547918354051,1.69077151827842,0.657751618414705,0.276350017785848,2.02862160014537,1.03800594213442,0.535081656179426,1.04535523804977,1.13309342697566,1.53288197440768,0.34362744548263,1.77113784413652,0.318565414324097,0.651083453856419,0,1.05402583354441,1.02389288923535,0,0.473554504088034,0.821127996921047,0.403213486449465,1.60464117470104,1.01377082717959,0,1.34140171940727,0.255725123687061,0,1.00267582127178,0.434539556882471,0.795285947051099,0.486634870302636,1.22895262313288,0.886917589850256,0.351339142772504,1.83370705696798,0,0,4.21911611751088,7.66170844116776,3.19099105245276,1.66943437013739,1.71598473234038,2.97166001063652,0.596287222100115,0,0.347140501607594,0,0.419499436209906,0.550236083880135,0.417989933073621,1.29208379584664,1.42306505074684,2.00832367658802,0.805658634218294,0,0.976248230192678,0,0,1.16089646769304,0.673588117878509,0.675668882899933,0,0,0,1.31780417436063,3.87780264148325,0,0,0.12663051166458,0.794455084879313,1.14734648299525,0.35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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4299 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7135 | |||
|TSSclassifier=S | |||
|UniProt=P51825 | |||
|association_with_transcript=-13bp_to_ENST00000307808_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_13_at_AFF1_5end | |||
|id=chr4:87928105..87928126,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.72e-13!172;CL:0000566!2.72e-13!172;CL:0002032!5.46e-12!165;CL:0000837!5.46e-12!165;CL:0000988!7.36e-12!182;CL:0000763!7.59e-12!112;CL:0000049!7.59e-12!112;CL:0000738!3.00e-11!140;CL:0000557!4.48e-11!71;CL:0002031!8.88e-11!124;CL:0000766!9.69e-11!76;CL:0000839!1.13e-10!70;CL:0002009!1.84e-08!65;CL:0002320!4.30e-08!365;CL:0002087!6.08e-08!119;CL:0000134!8.76e-08!358;CL:0002194!1.10e-07!63;CL:0000576!1.10e-07!63;CL:0000040!1.10e-07!63;CL:0000559!1.10e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.28e-11;33!CL:0002057;6.28e-11;33!CL:0000473;2.69e-10;39!CL:0000234;2.69e-10;39!CL:0000576;7.19e-08;48!CL:0000766;1.52e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.56e-19,72;CL:0000557,2.97e-19,67;CL:0000763,5.55e-19,108;CL:0000049,5.55e-19,108;CL:0000037,8.05e-19,168;CL:0000839,1.39e-18,66;CL:0000988,3.74e-18,177;CL:0002032,2.52e-17,161;CL:0000837,2.52e-17,161;CL:0000738,2.94e-17,136;CL:0002031,1.79e-16,120;CL:0002009,7.36e-15,61;CL:0002194,1.52e-13,59;CL:0000576,1.52e-13,59;CL:0000040,1.52e-13,59;CL:0000559,1.52e-13,59;CL:0002087,1.95e-11,115;CL:0000473,1.01e-09,48;CL:0000234,1.01e-09,48;CL:0000860,1.35e-08,42;CL:0002057,1.35e-08,42;CL:0002320,2.78e-08,361;CL:0000134,4.22e-08,354 | |||
|ontology_enrichment_development_v019=CL:0002057;5.55e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.05e-14!112;UBERON:0007023!1.20e-13!115;UBERON:0002405!6.56e-13!115;UBERON:0002390!9.26e-13!102;UBERON:0003061!9.26e-13!102;UBERON:0002371!2.31e-11!80;UBERON:0001474!8.40e-10!86;UBERON:0004765!4.84e-08!101;UBERON:0001434!4.84e-08!101;UBERON:0002384!2.62e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.45e-19,98;UBERON:0003061,1.45e-19,98;UBERON:0002371,1.33e-18,76;UBERON:0002193,4.17e-18,108;UBERON:0002405,2.39e-17,93;UBERON:0001474,1.10e-16,82;UBERON:0004765,2.37e-14,90;UBERON:0001434,1.89e-12,100;UBERON:0003081,6.14e-08,203;UBERON:0007023,1.12e-07,114;UBERON:0002384,1.26e-07,371 | |||
|phase1_expression=2.36181893051724,1.2846031433459,3.52386010239928,1.0007329835313,0.893922188854576,0.872338524100369,2.53299878168311,0.631719873426831,0.261185628199839,0.245733936501509,0.697801167972428,0.436882744260345,0.263766978228454,0.37129905888014,0.331397375727916,0,0,0,0.487932798790507,0.492484232307152,0.408001382488506,0.626909442956176,0.286235987131057,0.273748850145768,0.251085279189606,1.60468152070698,1.14940825229924,1.49550484495991,0,1.91914699048606,1.39334510984468,0,0,0,0.0774672005803016,0.710846162437108,2.05520307534393,0,0.401088894940283,1.08505435357926,2.23915474239924,0.647787332037959,2.06060454107349,1.16318591023652,3.02300754951048,1.94067248950253,1.16214518452842,1.6446715520873,1.85823822537062,3.45230870786581,4.61089271752381,3.07426898855161,0,1.93645405075148,2.70852973188684,1.69418105588344,1.91034305040492,1.79778787556068,2.14258724659632,1.60464513538047,0.639337125799041,5.93732340336089,3.19141852194611,5.54092175692502,1.16083695451434,1.13477044938228,0.622822248995575,2.76373531782418,1.5644487552606,5.2125322729228,1.21079900526674,0.736555271975129,1.89877432464531,0.422510572623884,0.212604299965044,0.419317291016752,0.44931452458598,0,0.32145117339416,0.285012743741249,0.19891667719909,0,1.75996244461323,1.09227722252426,0,0.426730222566507,0.800791974072025,1.72425731986345,0,0,0.569212969109448,2.34894875748376,1.52909291250092,3.96513985737078,3.36305137788922,0.526768169550154,2.16380747125216,2.75107533924415,0.822405995998037,1.00311897234407,0.32592226663359,0,0,0.668462741311041,0.589211814949674,0.221533894583621,0,0.768547918354051,1.69077151827842,0.657751618414705,0.276350017785848,2.02862160014537,1.03800594213442,0.535081656179426,1.04535523804977,1.13309342697566,1.53288197440768,0.34362744548263,1.77113784413652,0.318565414324097,0.651083453856419,0,1.05402583354441,1.02389288923535,0,0.473554504088034,0.821127996921047,0.403213486449465,1.60464117470104,1.01377082717959,0,1.34140171940727,0.255725123687061,0,1.00267582127178,0.434539556882471,0.795285947051099,0.486634870302636,1.22895262313288,0.886917589850256,0.351339142772504,1.83370705696798,0,0,4.21911611751088,7.66170844116776,3.19099105245276,1.66943437013739,1.71598473234038,2.97166001063652,0.596287222100115,0,0.347140501607594,0,0.419499436209906,0.550236083880135,0.417989933073621,1.29208379584664,1.42306505074684,2.00832367658802,0.805658634218294,0,0.976248230192678,0,0,1.16089646769304,0.673588117878509,0.675668882899933,0,0,0,1.31780417436063,3.87780264148325,0,0,0.12663051166458,0.794455084879313,1.14734648299525,0.354668382198357,1.12135520028461,0,0.74000264525148,1.55605517699883,0.404132016209064,0.326923806226917,2.4217188423189,1.15235184896,0,0,0,0.149448680551801,0,0.161872944368132,0,0.408308342509787,0.122834317311768,0.516628905878827,2.37600571456411,0.741800787835671,0.910161361938026,0.718618141816238,0,0.125118519871964,0.554128230968366,0.438977620880838,0.30648779579902,0.751190294532984,0,0.89694817844431,0,0.423863802319124,0.300091096084402,0.721367704669072,0.257640540045629,0.18611685633159,0.675105328965065,0.194874010322397,0.252433774244115,0.460249493211497,0.323292113637624,0.710019185033229,0.10075209822764,0,0.193260853163297,0,0,0.121973706129595,0,0.116193942869518,0.310983165046111,0.252320850875628,0,4.69348596989448,1.92972281457866,2.76269842704961,0.464367928031979,0,0.118306800039844,0.337169380156203,0.241011029883482,0.330881918197182,0.435758888184812,0.71181185733329,0.269662616320329,0.392442930250692,0.38474715694639,2.21446636387394,0,1.6462960453256,1.47008711385542,1.26755034821831,0.982827216677626,1.18157981336281,0.441463099414651,0.614942192715568,0.171567810298526,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,0,0.34779121492523,0.70445216541493,0.577465791044295,0.462985512576611,0.951270761172991,0,0,1.47730203652438,0.468008530278475,1.33768046059855,0,0.335964256397719,0.283550194484773,0.0895585227028483,0,0,50.2516502653862,2.3773077183571,2.69526550203004,3.31475892859011,3.7872730027914,0.444485260045183,0,0,1.71072446022705,0.411309970813294,0.300343057843917,0.857479297891735,0.897048674762886,1.74384027533312,0.51336800074665,0,0,0.845302752556,0,1.04007436911366,0.514414748524284,1.41849132023278,0.266422179016099,0.285955987316295,1.08524321078289,0.823240336780769,0,1.06617584622764,0,1.50719688529793,0,1.49959486773086,8.51366464488333,2.00902836572851,0,0,0,1.42636905040718,0.144781306667579,1.2328579353023,0.895304816199478,0.336255431980582,1.18218456121156,1.50939302401662,1.15508732651774,0.508189248444927,0,0,0.167516265334349,0,2.24702107184155,0,4.14415513436035,1.34960640891054,0.500170521059677,0.271265023699736,0.207970861530807,0.535286966391485,0.946214490203608,0.702848489956279,0,0,0,0.664225598535437,0.737476674166813,0.260650843404249,1.37060810223918,1.37257369524342,0.620304078368662,1.07857100409308,1.28073069364133,0.303127571446259,0,0,0.248107807818777,1.07423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|short_description=p13@AFF1 | |||
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Revision as of 12:10, 13 September 2013
Short description: | p13@AFF1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_AFF1_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -13bp_to_ENST00000307808_5end |
EntrezGene: | AFF1 |
HGNC: | 7135 |
UniProt: | P51825 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.56e-19 | 72 |
granulocyte monocyte progenitor cell | 2.97e-19 | 67 |
myeloid cell | 5.55e-19 | 108 |
common myeloid progenitor | 5.55e-19 | 108 |
hematopoietic stem cell | 8.05e-19 | 168 |
myeloid lineage restricted progenitor cell | 1.39e-18 | 66 |
hematopoietic cell | 3.74e-18 | 177 |
hematopoietic oligopotent progenitor cell | 2.52e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.52e-17 | 161 |
leukocyte | 2.94e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 1.79e-16 | 120 |
macrophage dendritic cell progenitor | 7.36e-15 | 61 |
monopoietic cell | 1.52e-13 | 59 |
monocyte | 1.52e-13 | 59 |
monoblast | 1.52e-13 | 59 |
promonocyte | 1.52e-13 | 59 |
nongranular leukocyte | 1.95e-11 | 115 |
defensive cell | 1.01e-09 | 48 |
phagocyte | 1.01e-09 | 48 |
classical monocyte | 1.35e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.35e-08 | 42 |
connective tissue cell | 2.78e-08 | 361 |
mesenchymal cell | 4.22e-08 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.45e-19 | 98 |
blood island | 1.45e-19 | 98 |
bone marrow | 1.33e-18 | 76 |
hemolymphoid system | 4.17e-18 | 108 |
immune system | 2.39e-17 | 93 |
bone element | 1.10e-16 | 82 |
skeletal element | 2.37e-14 | 90 |
skeletal system | 1.89e-12 | 100 |
lateral plate mesoderm | 6.14e-08 | 203 |
adult organism | 1.12e-07 | 114 |
connective tissue | 1.26e-07 | 371 |
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