FFCP PHASE1:Mm9::chr16:5227918..5227923,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=83|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:5227918..5227923,-|id=chr16:5227918..5227923,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003886!4.59e-30!38;UBERON:0002323!2.64e-29!37;UBERON:0004458!2.64e-29!37;UBERON:0002553!6.30e-29!39;UBERON:0000464!2.83e-21!57;UBERON:0000991!6.82e-17!18;UBERON:0005564!6.82e-17!18;UBERON:0004176!3.10e-16!17;UBERON:0009196!3.10e-16!17;UBERON:0009117!3.10e-16!17;UBERON:0005156!3.97e-16!26;UBERON:0000990!3.97e-16!26;UBERON:0003133!6.60e-15!24;UBERON:0003101!1.39e-14!16;UBERON:0000079!1.39e-14!16;UBERON:0003135!3.40e-14!15;UBERON:0000473!1.58e-13!14;UBERON:0002075!4.22e-13!19;UBERON:0000466!7.04e-13!79;UBERON:0000926!2.33e-11!193;UBERON:0004120!2.33e-11!193;UBERON:0006603!2.33e-11!193;UBERON:0005177!5.33e-11!85;UBERON:0002100!9.89e-10!98;UBERON:0003064!1.50e-09!14;UBERON:0001264!1.70e-09!12;UBERON:0003922!1.70e-09!12;UBERON:0002114!1.70e-09!12;UBERON:0003923!1.70e-09!12;UBERON:0003924!1.70e-09!12;UBERON:0003921!1.70e-09!12;UBERON:0003887!5.08e-09!10;UBERON:0005409!1.12e-08!59;UBERON:0002369!1.25e-08!7;UBERON:0006858!1.25e-08!7;UBERON:0005172!1.47e-08!49;UBERON:0005173!1.47e-08!49;UBERON:0002417!1.47e-08!49;UBERON:0000916!1.47e-08!49;UBERON:0001045!1.72e-08!13;UBERON:0002113!2.08e-08!14;UBERON:0003918!2.08e-08!14;UBERON:0005095!2.08e-08!14;UBERON:0007687!2.08e-08!14;UBERON:0006554!4.78e-08!16;UBERON:0001008!2.41e-07!17;UBERON:0009569!3.64e-07!66;UBERON:0003104!3.66e-07!131;UBERON:0009142!3.66e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0003886,2.59e-39,38;UBERON:0002553,4.17e-38,39;UBERON:0002323,6.02e-38,37;UBERON:0004458,6.02e-38,37;UBERON:0004176,7.05e-26,17;UBERON:0009196,7.05e-26,17;UBERON:0009117,7.05e-26,17;UBERON:0000991,3.30e-24,18;UBERON:0005564,3.30e-24,18;UBERON:0003135,4.05e-22,15;UBERON:0000473,7.35e-21,14;UBERON:0003101,1.62e-20,16;UBERON:0000079,1.62e-20,16;UBERON:0005156,1.27e-19,26;UBERON:0000990,1.27e-19,26;UBERON:0003133,2.92e-19,24;UBERON:0002369,1.00e-14,7;UBERON:0006858,1.00e-14,7;UBERON:0002075,1.21e-14,19;UBERON:0003064,7.49e-13,14;UBERON:0001264,8.17e-12,12;UBERON:0005177,1.76e-10,79;UBERON:0000926,3.16e-09,120;UBERON:0004120,3.16e-09,120;UBERON:0006603,3.16e-09,120;UBERON:0002100,2.00e-08,90;UBERON:0003887,3.26e-08,10|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66554880907831,4.85940641735582,0,0.157731082679119,0,0,11.7359740408476,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577703239502549,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,4.78867627240714,0,0,0,0,0,0,2.62622923353838,0,1.33597925158342,42.156934404171,67.2868707069832,40.8189430143224,29.6923601888666,24.5760397913623,5.6549966098354,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81471491080253,1.8661045591514,1.0108910337347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995171334092466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0.264450566663544,0.639864751605702,0,0.38660238396628,1.00841762311671,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.948339504765408,4.11294645395024,0,0.407302655690628,0.387904974335251,0.210407459670956,0.126473074248515,1.32849133181642,0.627994911365499,0.370191491765402,0,0.166845105716094,0,0.449724224769707,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0,0,0,0.655453258862952,0.690739927463582,1.15719246865209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.09700426041343,2.49291845134157,4.0721739838394,1.64970122972535,0,0.971122544619926,3.32555912661226,12.8251454234011,5.02013217897314,5.22639751504677,7.75284879504663,5.08947221268508,7.12994756769443,0.632073515871632,1.05418608574999,1.03135543248187,0,0,0.129358683782755,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,2.22132145037209,0.619160603889667,0.740778109478847,6.2161590811548,4.64760374251486,2.74533807847827,0,0,0,0,0,1.21991680276109,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,23.1114104860518,3.28936401296753,1.65458490457098,3.11121901350476,1.16243841129958,2.53434188236167,1.87771581833206,3.3853140059427,39.1125354707901,36.4792022447269,26.4987605757236,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,3.51100472824754,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0,0,0,0.385813221962283,0,0,0,0,0,0|short_description=p@chr16:5227918..5227923,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=83 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:5227918..5227923,- | |||
|id=chr16:5227918..5227923,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003886!4.59e-30!38;UBERON:0002323!2.64e-29!37;UBERON:0004458!2.64e-29!37;UBERON:0002553!6.30e-29!39;UBERON:0000464!2.83e-21!57;UBERON:0000991!6.82e-17!18;UBERON:0005564!6.82e-17!18;UBERON:0004176!3.10e-16!17;UBERON:0009196!3.10e-16!17;UBERON:0009117!3.10e-16!17;UBERON:0005156!3.97e-16!26;UBERON:0000990!3.97e-16!26;UBERON:0003133!6.60e-15!24;UBERON:0003101!1.39e-14!16;UBERON:0000079!1.39e-14!16;UBERON:0003135!3.40e-14!15;UBERON:0000473!1.58e-13!14;UBERON:0002075!4.22e-13!19;UBERON:0000466!7.04e-13!79;UBERON:0000926!2.33e-11!193;UBERON:0004120!2.33e-11!193;UBERON:0006603!2.33e-11!193;UBERON:0005177!5.33e-11!85;UBERON:0002100!9.89e-10!98;UBERON:0003064!1.50e-09!14;UBERON:0001264!1.70e-09!12;UBERON:0003922!1.70e-09!12;UBERON:0002114!1.70e-09!12;UBERON:0003923!1.70e-09!12;UBERON:0003924!1.70e-09!12;UBERON:0003921!1.70e-09!12;UBERON:0003887!5.08e-09!10;UBERON:0005409!1.12e-08!59;UBERON:0002369!1.25e-08!7;UBERON:0006858!1.25e-08!7;UBERON:0005172!1.47e-08!49;UBERON:0005173!1.47e-08!49;UBERON:0002417!1.47e-08!49;UBERON:0000916!1.47e-08!49;UBERON:0001045!1.72e-08!13;UBERON:0002113!2.08e-08!14;UBERON:0003918!2.08e-08!14;UBERON:0005095!2.08e-08!14;UBERON:0007687!2.08e-08!14;UBERON:0006554!4.78e-08!16;UBERON:0001008!2.41e-07!17;UBERON:0009569!3.64e-07!66;UBERON:0003104!3.66e-07!131;UBERON:0009142!3.66e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003886,2.59e-39,38;UBERON:0002553,4.17e-38,39;UBERON:0002323,6.02e-38,37;UBERON:0004458,6.02e-38,37;UBERON:0004176,7.05e-26,17;UBERON:0009196,7.05e-26,17;UBERON:0009117,7.05e-26,17;UBERON:0000991,3.30e-24,18;UBERON:0005564,3.30e-24,18;UBERON:0003135,4.05e-22,15;UBERON:0000473,7.35e-21,14;UBERON:0003101,1.62e-20,16;UBERON:0000079,1.62e-20,16;UBERON:0005156,1.27e-19,26;UBERON:0000990,1.27e-19,26;UBERON:0003133,2.92e-19,24;UBERON:0002369,1.00e-14,7;UBERON:0006858,1.00e-14,7;UBERON:0002075,1.21e-14,19;UBERON:0003064,7.49e-13,14;UBERON:0001264,8.17e-12,12;UBERON:0005177,1.76e-10,79;UBERON:0000926,3.16e-09,120;UBERON:0004120,3.16e-09,120;UBERON:0006603,3.16e-09,120;UBERON:0002100,2.00e-08,90;UBERON:0003887,3.26e-08,10 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66554880907831,4.85940641735582,0,0.157731082679119,0,0,11.7359740408476,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577703239502549,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,4.78867627240714,0,0,0,0,0,0,2.62622923353838,0,1.33597925158342,42.156934404171,67.2868707069832,40.8189430143224,29.6923601888666,24.5760397913623,5.6549966098354,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81471491080253,1.8661045591514,1.0108910337347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995171334092466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0.264450566663544,0.639864751605702,0,0.38660238396628,1.00841762311671,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.948339504765408,4.11294645395024,0,0.407302655690628,0.387904974335251,0.210407459670956,0.126473074248515,1.32849133181642,0.627994911365499,0.370191491765402,0,0.166845105716094,0,0.449724224769707,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0,0,0,0.655453258862952,0.690739927463582,1.15719246865209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.09700426041343,2.49291845134157,4.0721739838394,1.64970122972535,0,0.971122544619926,3.32555912661226,12.8251454234011,5.02013217897314,5.22639751504677,7.75284879504663,5.08947221268508,7.12994756769443,0.632073515871632,1.05418608574999,1.03135543248187,0,0,0.129358683782755,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,2.22132145037209,0.619160603889667,0.740778109478847,6.2161590811548,4.64760374251486,2.74533807847827,0,0,0,0,0,1.21991680276109,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,23.1114104860518,3.28936401296753,1.65458490457098,3.11121901350476,1.16243841129958,2.53434188236167,1.87771581833206,3.3853140059427,39.1125354707901,36.4792022447269,26.4987605757236,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,3.51100472824754,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0,0,0,0.385813221962283,0,0,0,0,0,0 | |||
|short_description=p@chr16:5227918..5227923,- | |||
}} |
Revision as of 12:53, 13 September 2013
Short description: | p@chr16:5227918..5227923, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:5227918..5227923, - |
Coexpression cluster: | MCL_coexpression_mm9:83 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
body cavity precursor | 2.59e-39 | 38 |
anatomical cavity | 4.17e-38 | 39 |
body cavity | 6.02e-38 | 37 |
body cavity or lining | 6.02e-38 | 37 |
external genitalia | 7.05e-26 | 17 |
indifferent external genitalia | 7.05e-26 | 17 |
indifferent gonad | 7.05e-26 | 17 |
gonad | 3.30e-24 | 18 |
gonad primordium | 3.30e-24 | 18 |
male reproductive organ | 4.05e-22 | 15 |
testis | 7.35e-21 | 14 |
male organism | 1.62e-20 | 16 |
male reproductive system | 1.62e-20 | 16 |
reproductive structure | 1.27e-19 | 26 |
reproductive system | 1.27e-19 | 26 |
reproductive organ | 2.92e-19 | 24 |
adrenal gland | 1.00e-14 | 7 |
adrenal/interrenal gland | 1.00e-14 | 7 |
viscus | 1.21e-14 | 19 |
intermediate mesoderm | 7.49e-13 | 14 |
pancreas | 8.17e-12 | 12 |
trunk region element | 1.76e-10 | 79 |
mesoderm | 3.16e-09 | 120 |
mesoderm-derived structure | 3.16e-09 | 120 |
presumptive mesoderm | 3.16e-09 | 120 |
trunk | 2.00e-08 | 90 |
intraembryonic coelom | 3.26e-08 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.