FFCP PHASE1:Mm9::chr16:55975285..55975320,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:55975285..55975320,+|id=chr16:55975285..55975320,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,1.14e-07,1;CL:0002078,1.14e-07,1;CL:0000115,1.14e-07,1;CL:0002262,1.14e-07,1;CL:1000398,1.14e-07,1;CL:0000355,4.09e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.98e-20,3;DOID:4045,2.98e-20,3;DOID:0050686,2.00e-10,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.14e-07,1;UBERON:0001281,1.14e-07,1;UBERON:0000353,1.14e-07,1;UBERON:0003497,1.14e-07,1;UBERON:0003909,1.14e-07,1;UBERON:0003928,1.14e-07,1;UBERON:0003835,1.14e-07,1;UBERON:0003513,1.14e-07,1;UBERON:0001280,1.14e-07,1;UBERON:0004647,1.14e-07,1;UBERON:0002294,1.14e-07,1;UBERON:0001173,1.14e-07,1;UBERON:0004912,1.14e-07,1;UBERON:0005171,1.14e-07,1;UBERON:0001134,4.09e-07,9;UBERON:0002036,4.09e-07,9;UBERON:0002385,4.09e-07,9;UBERON:0000486,4.09e-07,9;UBERON:0007503,4.09e-07,9;UBERON:0001015,4.09e-07,9;UBERON:0002329,4.09e-07,9;UBERON:0003082,4.09e-07,9;UBERON:0003059,4.09e-07,9;UBERON:0007282,4.09e-07,9;UBERON:0004290,4.09e-07,9;UBERON:0009618,4.09e-07,9|phase1_expression=0,0.348975407639361,0.454999239389536,0,0.500895729946347,0.16787927191189,0,0.129123323441576,0,0,0,0,1.02720437958723,1.04904482902797,0,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,5.85944283031671,3.1253413780952,3.66466620781659,24.7057224973026,6.14740936462601,2.42755176515577,0,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0,2.31891590961342,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0,0,0,0,0,0.433798070759735,0,0.161766849947409,0,0,0,0,0,0,1.1981512450592,0.599902730993408,1.14363204365758,0,0,0,0,0,0,0.162241263067758,0,0,0,0.420883711772948,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,1.13665399758237,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0.608929898229199,0,0.21183207086382,0,0.32977250588296,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,1.01987057996313,0.69975726161829,1.24379976423981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr16:55975285..55975320,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:55975285..55975320,+ | |||
|id=chr16:55975285..55975320,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,1.14e-07,1;CL:0002078,1.14e-07,1;CL:0000115,1.14e-07,1;CL:0002262,1.14e-07,1;CL:1000398,1.14e-07,1;CL:0000355,4.09e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.98e-20,3;DOID:4045,2.98e-20,3;DOID:0050686,2.00e-10,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.14e-07,1;UBERON:0001281,1.14e-07,1;UBERON:0000353,1.14e-07,1;UBERON:0003497,1.14e-07,1;UBERON:0003909,1.14e-07,1;UBERON:0003928,1.14e-07,1;UBERON:0003835,1.14e-07,1;UBERON:0003513,1.14e-07,1;UBERON:0001280,1.14e-07,1;UBERON:0004647,1.14e-07,1;UBERON:0002294,1.14e-07,1;UBERON:0001173,1.14e-07,1;UBERON:0004912,1.14e-07,1;UBERON:0005171,1.14e-07,1;UBERON:0001134,4.09e-07,9;UBERON:0002036,4.09e-07,9;UBERON:0002385,4.09e-07,9;UBERON:0000486,4.09e-07,9;UBERON:0007503,4.09e-07,9;UBERON:0001015,4.09e-07,9;UBERON:0002329,4.09e-07,9;UBERON:0003082,4.09e-07,9;UBERON:0003059,4.09e-07,9;UBERON:0007282,4.09e-07,9;UBERON:0004290,4.09e-07,9;UBERON:0009618,4.09e-07,9 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0,0.500895729946347,0.16787927191189,0,0.129123323441576,0,0,0,0,1.02720437958723,1.04904482902797,0,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,5.85944283031671,3.1253413780952,3.66466620781659,24.7057224973026,6.14740936462601,2.42755176515577,0,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0,2.31891590961342,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0,0,0,0,0,0.433798070759735,0,0.161766849947409,0,0,0,0,0,0,1.1981512450592,0.599902730993408,1.14363204365758,0,0,0,0,0,0,0.162241263067758,0,0,0,0.420883711772948,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,1.13665399758237,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0.608929898229199,0,0.21183207086382,0,0.32977250588296,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,1.01987057996313,0.69975726161829,1.24379976423981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:55975285..55975320,+ | |||
}} |
Revision as of 12:55, 13 September 2013
Short description: | p@chr16:55975285..55975320, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:55975285..55975320, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 1.14e-07 | 1 |
meso-epithelial cell | 1.14e-07 | 1 |
endothelial cell | 1.14e-07 | 1 |
endothelial cell of sinusoid | 1.14e-07 | 1 |
endothelial cell of hepatic sinusoid | 1.14e-07 | 1 |
multi-potent skeletal muscle stem cell | 4.09e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bile duct | 1.14e-07 | 1 |
hepatic sinusoid | 1.14e-07 | 1 |
parenchyma | 1.14e-07 | 1 |
abdomen blood vessel | 1.14e-07 | 1 |
sinusoid | 1.14e-07 | 1 |
digestive system duct | 1.14e-07 | 1 |
abdominal segment blood vessel | 1.14e-07 | 1 |
trunk blood vessel | 1.14e-07 | 1 |
liver parenchyma | 1.14e-07 | 1 |
liver lobule | 1.14e-07 | 1 |
biliary system | 1.14e-07 | 1 |
biliary tree | 1.14e-07 | 1 |
biliary bud | 1.14e-07 | 1 |
hepatic duct | 1.14e-07 | 1 |
skeletal muscle tissue | 4.09e-07 | 9 |
striated muscle tissue | 4.09e-07 | 9 |
muscle tissue | 4.09e-07 | 9 |
multilaminar epithelium | 4.09e-07 | 9 |
epithelial vesicle | 4.09e-07 | 9 |
musculature | 4.09e-07 | 9 |
somite | 4.09e-07 | 9 |
myotome | 4.09e-07 | 9 |
presomitic mesoderm | 4.09e-07 | 9 |
presumptive segmental plate | 4.09e-07 | 9 |
dermomyotome | 4.09e-07 | 9 |
trunk paraxial mesoderm | 4.09e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.98e-20 | 3 |
muscle cancer | 2.98e-20 | 3 |
organ system cancer | 2.00e-10 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.