FFCP PHASE1:Mm9::chr16:75855957..75855974,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:75855957..75855974,+|id=chr16:75855957..75855974,+|ontology_enrichment_celltype=CL:0000988!2.50e-13!32;CL:0002032!2.50e-13!32;CL:0000037!2.50e-13!32;CL:0000566!2.50e-13!32;CL:0000837!2.50e-13!32;CL:0000084!6.82e-09!11;CL:0000827!6.82e-09!11;CL:0000624!8.72e-09!8;CL:0002320!1.75e-08!46;CL:0000134!1.75e-08!46;CL:0000838!4.19e-08!12;CL:0000791!8.80e-08!9;CL:0000789!8.80e-08!9;CL:0002420!8.80e-08!9;CL:0002419!8.80e-08!9;CL:0000790!8.80e-08!9;CL:0000893!9.91e-08!6;CL:0002489!9.91e-08!6;CL:0000898!9.91e-08!6;CL:0000809!9.91e-08!6;CL:0000810!9.91e-08!6;CL:0000895!9.91e-08!6;CL:0000808!9.91e-08!6;CL:0000894!9.91e-08!6;CL:0000806!9.91e-08!6;CL:0000807!9.91e-08!6;CL:0000805!9.91e-08!6;CL:0002425!9.91e-08!6;CL:0002436!9.91e-08!6;CL:0002427!9.91e-08!6;CL:0002428!9.91e-08!6;CL:0002429!9.91e-08!6;CL:0002433!9.91e-08!6;CL:0002431!9.91e-08!6;CL:0002432!9.91e-08!6;CL:0000034!1.70e-07!97;CL:0000542!1.95e-07!13;CL:0000051!1.95e-07!13;CL:0000049!3.23e-07!19;CL:0000219!7.50e-07!54|ontology_enrichment_celltype_v019_2=CL:0000557,7.62e-10,7;CL:0000049,1.62e-09,19;CL:0000355,5.12e-08,9|ontology_enrichment_disease=DOID:0060100!1.28e-10!3;DOID:4045!1.28e-10!3|ontology_enrichment_disease_v019_2=DOID:0060100,7.86e-23,3;DOID:4045,7.86e-23,3;DOID:0050686,9.54e-12,6|ontology_enrichment_uberon=UBERON:0002384!1.75e-08!46|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.12e-08,9;UBERON:0002036,5.12e-08,9;UBERON:0002385,5.12e-08,9;UBERON:0000486,5.12e-08,9;UBERON:0007503,5.12e-08,9;UBERON:0001015,5.12e-08,9;UBERON:0002329,5.12e-08,9;UBERON:0003082,5.12e-08,9;UBERON:0003059,5.12e-08,9;UBERON:0007282,5.12e-08,9;UBERON:0004290,5.12e-08,9;UBERON:0009618,5.12e-08,9;UBERON:0002204,5.42e-08,32;UBERON:0000383,2.88e-07,10|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0,0.468129052643987,0.171217968225505,0.239316476986009,0,0.174840804837995,0,0,0,0,0.137114433605739,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27797446105362,4.6880120671428,2.09409497589519,35.8821207698919,16.3930916390027,12.1377588257788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31796636956512,2.39961092397363,0.889491589511453,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,2.1066395619397,1.02939162845886,1.70498099637356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,1.01987057996313,0.69975726161829,0.690999869022119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr16:75855957..75855974,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:75855957..75855974,+ | |||
|id=chr16:75855957..75855974,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.50e-13!32;CL:0002032!2.50e-13!32;CL:0000037!2.50e-13!32;CL:0000566!2.50e-13!32;CL:0000837!2.50e-13!32;CL:0000084!6.82e-09!11;CL:0000827!6.82e-09!11;CL:0000624!8.72e-09!8;CL:0002320!1.75e-08!46;CL:0000134!1.75e-08!46;CL:0000838!4.19e-08!12;CL:0000791!8.80e-08!9;CL:0000789!8.80e-08!9;CL:0002420!8.80e-08!9;CL:0002419!8.80e-08!9;CL:0000790!8.80e-08!9;CL:0000893!9.91e-08!6;CL:0002489!9.91e-08!6;CL:0000898!9.91e-08!6;CL:0000809!9.91e-08!6;CL:0000810!9.91e-08!6;CL:0000895!9.91e-08!6;CL:0000808!9.91e-08!6;CL:0000894!9.91e-08!6;CL:0000806!9.91e-08!6;CL:0000807!9.91e-08!6;CL:0000805!9.91e-08!6;CL:0002425!9.91e-08!6;CL:0002436!9.91e-08!6;CL:0002427!9.91e-08!6;CL:0002428!9.91e-08!6;CL:0002429!9.91e-08!6;CL:0002433!9.91e-08!6;CL:0002431!9.91e-08!6;CL:0002432!9.91e-08!6;CL:0000034!1.70e-07!97;CL:0000542!1.95e-07!13;CL:0000051!1.95e-07!13;CL:0000049!3.23e-07!19;CL:0000219!7.50e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,7.62e-10,7;CL:0000049,1.62e-09,19;CL:0000355,5.12e-08,9 | |||
|ontology_enrichment_disease=DOID:0060100!1.28e-10!3;DOID:4045!1.28e-10!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,7.86e-23,3;DOID:4045,7.86e-23,3;DOID:0050686,9.54e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.75e-08!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.12e-08,9;UBERON:0002036,5.12e-08,9;UBERON:0002385,5.12e-08,9;UBERON:0000486,5.12e-08,9;UBERON:0007503,5.12e-08,9;UBERON:0001015,5.12e-08,9;UBERON:0002329,5.12e-08,9;UBERON:0003082,5.12e-08,9;UBERON:0003059,5.12e-08,9;UBERON:0007282,5.12e-08,9;UBERON:0004290,5.12e-08,9;UBERON:0009618,5.12e-08,9;UBERON:0002204,5.42e-08,32;UBERON:0000383,2.88e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0,0.468129052643987,0.171217968225505,0.239316476986009,0,0.174840804837995,0,0,0,0,0.137114433605739,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27797446105362,4.6880120671428,2.09409497589519,35.8821207698919,16.3930916390027,12.1377588257788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31796636956512,2.39961092397363,0.889491589511453,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,2.1066395619397,1.02939162845886,1.70498099637356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,1.01987057996313,0.69975726161829,0.690999869022119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:75855957..75855974,+ | |||
}} |
Revision as of 13:07, 13 September 2013
Short description: | p@chr16:75855957..75855974, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:75855957..75855974, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 7.62e-10 | 7 |
common myeloid progenitor | 1.62e-09 | 19 |
multi-potent skeletal muscle stem cell | 5.12e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 5.12e-08 | 9 |
striated muscle tissue | 5.12e-08 | 9 |
muscle tissue | 5.12e-08 | 9 |
multilaminar epithelium | 5.12e-08 | 9 |
epithelial vesicle | 5.12e-08 | 9 |
musculature | 5.12e-08 | 9 |
somite | 5.12e-08 | 9 |
myotome | 5.12e-08 | 9 |
presomitic mesoderm | 5.12e-08 | 9 |
presumptive segmental plate | 5.12e-08 | 9 |
dermomyotome | 5.12e-08 | 9 |
trunk paraxial mesoderm | 5.12e-08 | 9 |
musculoskeletal system | 5.42e-08 | 32 |
musculature of body | 2.88e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 7.86e-23 | 3 |
muscle cancer | 7.86e-23 | 3 |
organ system cancer | 9.54e-12 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.