FFCP PHASE1:Mm9::chr17:26088998..26089027,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=403|UniProt=E0CXQ2|association_with_transcript=482bp_to_ENSMUST00000162431,uc008bcv.1_5end|description=CAGE_peak_1_at_ENSMUST00000162431_5end,CAGE_peak_1_at_uc008bcv.1_5end|id=chr17:26088998..26089027,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000120,7.32e-16,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!2.57e-14!14;UBERON:0003918!2.57e-14!14;UBERON:0005095!2.57e-14!14;UBERON:0007687!2.57e-14!14;UBERON:0006554!4.96e-12!16;UBERON:0000489!4.05e-11!21;UBERON:0001008!4.29e-11!17;UBERON:0000970!7.77e-09!9;UBERON:0000019!7.77e-09!9;UBERON:0000047!7.77e-09!9;UBERON:0004088!7.77e-09!9;UBERON:0002104!7.77e-09!9;UBERON:0001456!7.77e-09!9;UBERON:0003072!7.77e-09!9;UBERON:0003071!7.77e-09!9;UBERON:0004128!7.77e-09!9;UBERON:0002298!4.92e-08!6;UBERON:0000033!3.97e-07!63;UBERON:0001444!6.97e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0002113,5.46e-12,14;UBERON:0003918,5.46e-12,14;UBERON:0011143,5.46e-12,14;UBERON:0005095,5.46e-12,14;UBERON:0007687,5.46e-12,14;UBERON:0006554,3.09e-09,18;UBERON:0000970,3.91e-09,9;UBERON:0000019,3.91e-09,9;UBERON:0000047,3.91e-09,9;UBERON:0010312,3.91e-09,9;UBERON:0004088,3.91e-09,9;UBERON:0002104,3.91e-09,9;UBERON:0001456,3.91e-09,9;UBERON:0003072,3.91e-09,9;UBERON:0004128,3.91e-09,9;UBERON:0003071,3.91e-09,9;UBERON:0001008,9.97e-09,19;UBERON:0004733,3.46e-08,6;UBERON:0004732,3.46e-08,6;UBERON:0002028,3.46e-08,6;UBERON:0007277,3.46e-08,6;UBERON:0000489,7.43e-08,21;UBERON:0001444,1.69e-07,11;UBERON:0000020,6.98e-07,12;UBERON:0001032,6.98e-07,12;UBERON:0004456,6.98e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,2.11596391708813,3.1691570175309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638436690425939,0.614426133024974,0,0,0,0.279182999001381,2.8138130501584,0.61119299110724,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,8.19786231632332,4.60782754989601,0,0,0,0,1.19832511523858,0,0,0.521472960576829,0.255715457330331,0.20778804455956,0.324482526135515,0.203678727700633,0.124406970610093,0.758168275301024,0.420883711772948,0.520481771850815,0.229902104433473,0.360124259610698,1.50704817835715,1.63287597963187,2.562274405697,4.2165776051878,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,1.13800740571849,0.571242563048644,1.1270773567308,0.814605311381257,2.32742984601151,2.10407459670956,2.15004226222475,1.18088118383682,0.784993639206874,0.987177311374404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0.727067458955011,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0.565879024158229,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0.412085900803307,0.147198920134397,0,0,0,0.436039249896986,0.0941093804153306,0.338458431566706,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0,0,0,0,0.249810577937946,0,0.644613162144895,0,0,0|short_description=p1@ENSMUST00000162431,p1@uc008bcv.1}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=403 | |||
|UniProt=E0CXQ2 | |||
|association_with_transcript=482bp_to_ENSMUST00000162431,uc008bcv.1_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000162431_5end,CAGE_peak_1_at_uc008bcv.1_5end | |||
|id=chr17:26088998..26089027,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000120,7.32e-16,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!2.57e-14!14;UBERON:0003918!2.57e-14!14;UBERON:0005095!2.57e-14!14;UBERON:0007687!2.57e-14!14;UBERON:0006554!4.96e-12!16;UBERON:0000489!4.05e-11!21;UBERON:0001008!4.29e-11!17;UBERON:0000970!7.77e-09!9;UBERON:0000019!7.77e-09!9;UBERON:0000047!7.77e-09!9;UBERON:0004088!7.77e-09!9;UBERON:0002104!7.77e-09!9;UBERON:0001456!7.77e-09!9;UBERON:0003072!7.77e-09!9;UBERON:0003071!7.77e-09!9;UBERON:0004128!7.77e-09!9;UBERON:0002298!4.92e-08!6;UBERON:0000033!3.97e-07!63;UBERON:0001444!6.97e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,5.46e-12,14;UBERON:0003918,5.46e-12,14;UBERON:0011143,5.46e-12,14;UBERON:0005095,5.46e-12,14;UBERON:0007687,5.46e-12,14;UBERON:0006554,3.09e-09,18;UBERON:0000970,3.91e-09,9;UBERON:0000019,3.91e-09,9;UBERON:0000047,3.91e-09,9;UBERON:0010312,3.91e-09,9;UBERON:0004088,3.91e-09,9;UBERON:0002104,3.91e-09,9;UBERON:0001456,3.91e-09,9;UBERON:0003072,3.91e-09,9;UBERON:0004128,3.91e-09,9;UBERON:0003071,3.91e-09,9;UBERON:0001008,9.97e-09,19;UBERON:0004733,3.46e-08,6;UBERON:0004732,3.46e-08,6;UBERON:0002028,3.46e-08,6;UBERON:0007277,3.46e-08,6;UBERON:0000489,7.43e-08,21;UBERON:0001444,1.69e-07,11;UBERON:0000020,6.98e-07,12;UBERON:0001032,6.98e-07,12;UBERON:0004456,6.98e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,2.11596391708813,3.1691570175309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638436690425939,0.614426133024974,0,0,0,0.279182999001381,2.8138130501584,0.61119299110724,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,8.19786231632332,4.60782754989601,0,0,0,0,1.19832511523858,0,0,0.521472960576829,0.255715457330331,0.20778804455956,0.324482526135515,0.203678727700633,0.124406970610093,0.758168275301024,0.420883711772948,0.520481771850815,0.229902104433473,0.360124259610698,1.50704817835715,1.63287597963187,2.562274405697,4.2165776051878,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,1.13800740571849,0.571242563048644,1.1270773567308,0.814605311381257,2.32742984601151,2.10407459670956,2.15004226222475,1.18088118383682,0.784993639206874,0.987177311374404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0.727067458955011,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0.565879024158229,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0.412085900803307,0.147198920134397,0,0,0,0.436039249896986,0.0941093804153306,0.338458431566706,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0,0,0,0,0.249810577937946,0,0.644613162144895,0,0,0 | |||
|short_description=p1@ENSMUST00000162431,p1@uc008bcv.1 | |||
}} |
Revision as of 13:48, 13 September 2013
Short description: | p1@ENSMUST00000162431, p1@uc008bcv.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000162431_5end, CAGE_peak_1_at_uc008bcv.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:403 |
Association with transcript: | 482bp_to_ENSMUST00000162431, uc008bcv.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 7.32e-16 | 3 |
Ontology term | p-value | n |
---|---|---|
kidney | 5.46e-12 | 14 |
kidney mesenchyme | 5.46e-12 | 14 |
upper urinary tract | 5.46e-12 | 14 |
kidney rudiment | 5.46e-12 | 14 |
kidney field | 5.46e-12 | 14 |
urinary system structure | 3.09e-09 | 18 |
eye | 3.91e-09 | 9 |
camera-type eye | 3.91e-09 | 9 |
simple eye | 3.91e-09 | 9 |
immature eye | 3.91e-09 | 9 |
ocular region | 3.91e-09 | 9 |
visual system | 3.91e-09 | 9 |
face | 3.91e-09 | 9 |
optic cup | 3.91e-09 | 9 |
optic vesicle | 3.91e-09 | 9 |
eye primordium | 3.91e-09 | 9 |
renal system | 9.97e-09 | 19 |
segmental subdivision of hindbrain | 3.46e-08 | 6 |
segmental subdivision of nervous system | 3.46e-08 | 6 |
hindbrain | 3.46e-08 | 6 |
presumptive hindbrain | 3.46e-08 | 6 |
cavitated compound organ | 7.43e-08 | 21 |
subdivision of head | 1.69e-07 | 11 |
sense organ | 6.98e-07 | 12 |
sensory system | 6.98e-07 | 12 |
entire sense organ system | 6.98e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.