FFCP PHASE1:Mm9::chr17:35531042..35531044,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=15019|HGNC=|MCL_coexpression_id=319|UniProt=Q9CZ20,Q52PG7|association_with_transcript=0bp_to_NM_023124,uc008chn.1_5end|description=CAGE_peak_2_at_H2-Q8_5end|id=chr17:35531042..35531044,+|ontology_enrichment_celltype=CL:0000988!4.50e-09!32;CL:0002032!4.50e-09!32;CL:0000037!4.50e-09!32;CL:0000566!4.50e-09!32;CL:0000837!4.50e-09!32;CL:0000791!9.86e-08!9;CL:0000789!9.86e-08!9;CL:0002420!9.86e-08!9;CL:0002419!9.86e-08!9;CL:0000790!9.86e-08!9;CL:0000624!5.21e-07!8;CL:0000838!9.06e-07!12|ontology_enrichment_celltype_v019_2=CL:0000988,2.04e-12,32;CL:0002032,2.04e-12,32;CL:0000037,2.04e-12,32;CL:0000837,2.04e-12,32;CL:0000791,9.13e-10,9;CL:0000789,9.13e-10,9;CL:0002420,9.13e-10,9;CL:0002419,9.13e-10,9;CL:0000790,9.13e-10,9;CL:0002031,5.82e-09,25;CL:0000624,8.28e-09,8;CL:0002320,1.07e-08,46;CL:0000134,1.07e-08,46;CL:0000838,3.28e-08,12;CL:0000084,2.35e-07,11;CL:0000827,2.35e-07,11;CL:0000738,2.71e-07,17;CL:0002087,2.71e-07,17;CL:0000542,2.77e-07,13;CL:0000051,2.77e-07,13;CL:0000893,6.75e-07,6;CL:0002489,6.75e-07,6;CL:0000898,6.75e-07,6;CL:0000809,6.75e-07,6;CL:0000810,6.75e-07,6;CL:0000895,6.75e-07,6;CL:0000808,6.75e-07,6;CL:0000894,6.75e-07,6;CL:0000806,6.75e-07,6;CL:0000807,6.75e-07,6;CL:0000805,6.75e-07,6;CL:0002425,6.75e-07,6;CL:0002436,6.75e-07,6;CL:0002427,6.75e-07,6;CL:0002428,6.75e-07,6;CL:0002429,6.75e-07,6;CL:0002433,6.75e-07,6;CL:0002431,6.75e-07,6;CL:0002432,6.75e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!5.37e-14!70;UBERON:0003929!3.16e-11!55;UBERON:0005911!3.35e-11!69;UBERON:0002193!4.03e-11!48;UBERON:0004119!6.80e-11!130;UBERON:0000925!6.80e-11!130;UBERON:0006595!6.80e-11!130;UBERON:0001007!1.84e-10!128;UBERON:0001555!1.84e-10!128;UBERON:0007026!1.84e-10!128;UBERON:0005057!3.18e-10!51;UBERON:0002390!7.27e-10!45;UBERON:0003061!7.27e-10!45;UBERON:0004921!7.31e-10!126;UBERON:0004185!7.31e-10!126;UBERON:0000490!2.82e-08!66;UBERON:0004177!9.32e-08!29;UBERON:0007023!1.22e-07!51;UBERON:0002530!2.32e-07!65;UBERON:0000077!5.31e-07!97;UBERON:0004923!6.33e-07!24;UBERON:0000926!9.25e-07!193;UBERON:0004120!9.25e-07!193;UBERON:0006603!9.25e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.24e-13,48;UBERON:0002405,8.24e-13,48;UBERON:0002390,3.32e-11,45;UBERON:0003061,3.32e-11,45;UBERON:0004119,3.85e-11,118;UBERON:0000925,3.85e-11,118;UBERON:0006595,3.85e-11,118;UBERON:0001007,5.17e-11,116;UBERON:0001555,5.17e-11,116;UBERON:0007026,5.17e-11,116;UBERON:0004921,2.75e-10,114;UBERON:0005911,4.99e-10,69;UBERON:0003929,5.95e-10,55;UBERON:0000077,6.90e-09,35;UBERON:0002384,1.07e-08,46;UBERON:0007023,1.11e-08,51;UBERON:0004177,1.08e-07,29;UBERON:0005057,1.08e-07,29;UBERON:0003408,4.84e-07,24;UBERON:0001041,5.11e-07,80;UBERON:0000490,5.50e-07,66;UBERON:0006562,9.01e-07,24;UBERON:0001557,9.01e-07,24;UBERON:0001042,9.01e-07,24;UBERON:0008814,9.01e-07,24;UBERON:0009145,9.01e-07,24|phase1_expression=0.160148847104794,5.58360652222978,5.45999087267443,6.95667686005709,5.00895729946347,3.52546471014969,5.84031601488814,115.565374480211,63.9180798568567,347.58582158816,7.53359060192222,37.4929147278081,23.7969014604376,107.26483376811,7.99463428357591,8.30148596298286,0.699561878128147,37.224535512272,32.0847774637429,46.6828616977833,6.80346321208558,0.297872853602656,0,2.23989391910769,4.35877634027623,3.44539178469012,2.15380998079537,4.09395342103189,2.09025761402011,3.2763916868791,2.88249663851896,0,0,0,0.577703239502549,0.332469290716985,1.02084678131185,0.837063261473815,0.7813353445238,2.09409497589519,4.1176204162171,4.09827290975067,1.45653105909346,0,0.101376931219515,0,0,0,0,0,0,0,36.5766081205865,37.7188313845899,62.1773528413558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34751199332871,0,11.3047150593654,2.58127163094416,0,0,1.29955283489534,1.79210754838934,7.16266542671934,0,0,0,0,2.56652954828636,0,0,0,0,0,4.90990682791958,60.0735890061438,6.38301197978747,0.173485326766136,0.304465478312141,0,0.301445281105245,0,0.753999547978053,0,7.66376591675532,5.30766331169925,0.323533699894818,1.54589062922275,1.93950101254089,5.59175283654366,0.292780797011547,0.209446706813455,5.36459815938042,14.2579998162045,11.9980546198682,11.5633906636489,0.149790639404823,0,0,0.173824320192276,0,0,0,0,2.98576729464223,1.0108910337347,0.841767423545896,0.260240885925407,0.229902104433473,0.180062129805349,0,0.136072998302656,0.2562274405697,0.187403449119458,0.258703370739016,0,0.756424320671277,0,0,0,0,0,0,5.61770549850588,7.97778512055617,10.5140494776369,0,0,0,0,0.196764231747404,0.308534225774757,0,0,0.350296027101508,0.16455984991348,0.32833492815819,0.486412857275134,0.146199987425332,1.53685080703735,3.75777972529041,0.210289948564127,0.102904612379284,2.97376904685418,2.90895623329899,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0,1.00534083520108,1.1937388322469,0.38992817423824,0,1.29682829924817,1.99141273254367,0.189667900953082,0.114248512609729,0,0.203651327845314,0.581857461502877,0.140271639780637,1.3279672796094,1.91893192373483,2.66897837330337,3.94870924549762,3.85388415213294,0.83422552858047,0.786235980452812,0.449724224769707,1.01430060694251,1.68824011826692,0.50925170356284,0.287696137450811,0.486405680325106,1.09824565275233,4.31304619582064,2.23284568601102,1.5601883655728,2.52578877947112,2.33216637578486,3.37710464954357,15.5192679739948,0,0.325929952884052,0,0,0,0,0.390267295715598,0.788175720530955,4.20782910332672,2.23236676120482,8.02930242107116,6.90739927463582,10.2700831592873,28.6503439484617,26.6513785071168,4.91764273019036,5.24279817978992,0,0.234423373184406,0,1.51482556322624,0,0.390438744296638,0,0,0,0,0,0,0.395287777946524,0.321321316421807,2.2710413633323,0,0,7.09371528781903,2.65490276679926,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0.948110273807448,1.05418608574999,0,1.70219802876894,0,0.129358683782755,0.214337035031592,0,0.178368817602071,0,0,3.75474732901937,0.63549621259146,1.10264199027481,11.8718102117866,0,0.0603129249281559,0,0.164140899745061,0.582961673259701,0.18542530201051,15.3783792718067,0.412773735926445,0.555583582109135,2.26042148405629,6.69801715833023,12.1252431799457,35.8654487287035,31.0692224158521,37.3139929271944,4.77335309007557,0,0.203319467126849,0,0,0,0,0.909188012978695,0.785267825952089,1.29614973291793,4.97071450469541,0,0,0,0.194451188344048,0.129159823477731,0,0,0.2604087696879,0.209718688851422,0.241584120826006,0.576060012515731,2.52808896502543,0.202725215290164,0.410843828659309,0.909445760844565,1.79026695667481,1.39076948346885,1.32214994471966,1.18151621739662,1.9183625490148,2.13379058634,2.21817607301049,3.60594158737084,3.84847366561318,4.79195298944433,1.58711268530648,0,0,0,2.12508553435409,3.75364950902364,4.76194223094889,1.2862102744744,3.51100472824754,0,0,0,0,0,0,0.675022500231806,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0.347652977834566,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0,0,0,0,0,0,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0,0,0.429742108096597,0.191288332068843,0.882365676478062,0.927471342481686|short_description=p2@H2-Q8}} | ||
|EntrezGene=15019 | |||
|HGNC= | |||
|MCL_coexpression_id=319 | |||
|UniProt=Q9CZ20,Q52PG7 | |||
|association_with_transcript=0bp_to_NM_023124,uc008chn.1_5end | |||
|description=CAGE_peak_2_at_H2-Q8_5end | |||
|id=chr17:35531042..35531044,+ | |||
|ontology_enrichment_celltype=CL:0000988!4.50e-09!32;CL:0002032!4.50e-09!32;CL:0000037!4.50e-09!32;CL:0000566!4.50e-09!32;CL:0000837!4.50e-09!32;CL:0000791!9.86e-08!9;CL:0000789!9.86e-08!9;CL:0002420!9.86e-08!9;CL:0002419!9.86e-08!9;CL:0000790!9.86e-08!9;CL:0000624!5.21e-07!8;CL:0000838!9.06e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.04e-12,32;CL:0002032,2.04e-12,32;CL:0000037,2.04e-12,32;CL:0000837,2.04e-12,32;CL:0000791,9.13e-10,9;CL:0000789,9.13e-10,9;CL:0002420,9.13e-10,9;CL:0002419,9.13e-10,9;CL:0000790,9.13e-10,9;CL:0002031,5.82e-09,25;CL:0000624,8.28e-09,8;CL:0002320,1.07e-08,46;CL:0000134,1.07e-08,46;CL:0000838,3.28e-08,12;CL:0000084,2.35e-07,11;CL:0000827,2.35e-07,11;CL:0000738,2.71e-07,17;CL:0002087,2.71e-07,17;CL:0000542,2.77e-07,13;CL:0000051,2.77e-07,13;CL:0000893,6.75e-07,6;CL:0002489,6.75e-07,6;CL:0000898,6.75e-07,6;CL:0000809,6.75e-07,6;CL:0000810,6.75e-07,6;CL:0000895,6.75e-07,6;CL:0000808,6.75e-07,6;CL:0000894,6.75e-07,6;CL:0000806,6.75e-07,6;CL:0000807,6.75e-07,6;CL:0000805,6.75e-07,6;CL:0002425,6.75e-07,6;CL:0002436,6.75e-07,6;CL:0002427,6.75e-07,6;CL:0002428,6.75e-07,6;CL:0002429,6.75e-07,6;CL:0002433,6.75e-07,6;CL:0002431,6.75e-07,6;CL:0002432,6.75e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!5.37e-14!70;UBERON:0003929!3.16e-11!55;UBERON:0005911!3.35e-11!69;UBERON:0002193!4.03e-11!48;UBERON:0004119!6.80e-11!130;UBERON:0000925!6.80e-11!130;UBERON:0006595!6.80e-11!130;UBERON:0001007!1.84e-10!128;UBERON:0001555!1.84e-10!128;UBERON:0007026!1.84e-10!128;UBERON:0005057!3.18e-10!51;UBERON:0002390!7.27e-10!45;UBERON:0003061!7.27e-10!45;UBERON:0004921!7.31e-10!126;UBERON:0004185!7.31e-10!126;UBERON:0000490!2.82e-08!66;UBERON:0004177!9.32e-08!29;UBERON:0007023!1.22e-07!51;UBERON:0002530!2.32e-07!65;UBERON:0000077!5.31e-07!97;UBERON:0004923!6.33e-07!24;UBERON:0000926!9.25e-07!193;UBERON:0004120!9.25e-07!193;UBERON:0006603!9.25e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.24e-13,48;UBERON:0002405,8.24e-13,48;UBERON:0002390,3.32e-11,45;UBERON:0003061,3.32e-11,45;UBERON:0004119,3.85e-11,118;UBERON:0000925,3.85e-11,118;UBERON:0006595,3.85e-11,118;UBERON:0001007,5.17e-11,116;UBERON:0001555,5.17e-11,116;UBERON:0007026,5.17e-11,116;UBERON:0004921,2.75e-10,114;UBERON:0005911,4.99e-10,69;UBERON:0003929,5.95e-10,55;UBERON:0000077,6.90e-09,35;UBERON:0002384,1.07e-08,46;UBERON:0007023,1.11e-08,51;UBERON:0004177,1.08e-07,29;UBERON:0005057,1.08e-07,29;UBERON:0003408,4.84e-07,24;UBERON:0001041,5.11e-07,80;UBERON:0000490,5.50e-07,66;UBERON:0006562,9.01e-07,24;UBERON:0001557,9.01e-07,24;UBERON:0001042,9.01e-07,24;UBERON:0008814,9.01e-07,24;UBERON:0009145,9.01e-07,24 | |||
|phase1_expression=0.160148847104794,5.58360652222978,5.45999087267443,6.95667686005709,5.00895729946347,3.52546471014969,5.84031601488814,115.565374480211,63.9180798568567,347.58582158816,7.53359060192222,37.4929147278081,23.7969014604376,107.26483376811,7.99463428357591,8.30148596298286,0.699561878128147,37.224535512272,32.0847774637429,46.6828616977833,6.80346321208558,0.297872853602656,0,2.23989391910769,4.35877634027623,3.44539178469012,2.15380998079537,4.09395342103189,2.09025761402011,3.2763916868791,2.88249663851896,0,0,0,0.577703239502549,0.332469290716985,1.02084678131185,0.837063261473815,0.7813353445238,2.09409497589519,4.1176204162171,4.09827290975067,1.45653105909346,0,0.101376931219515,0,0,0,0,0,0,0,36.5766081205865,37.7188313845899,62.1773528413558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34751199332871,0,11.3047150593654,2.58127163094416,0,0,1.29955283489534,1.79210754838934,7.16266542671934,0,0,0,0,2.56652954828636,0,0,0,0,0,4.90990682791958,60.0735890061438,6.38301197978747,0.173485326766136,0.304465478312141,0,0.301445281105245,0,0.753999547978053,0,7.66376591675532,5.30766331169925,0.323533699894818,1.54589062922275,1.93950101254089,5.59175283654366,0.292780797011547,0.209446706813455,5.36459815938042,14.2579998162045,11.9980546198682,11.5633906636489,0.149790639404823,0,0,0.173824320192276,0,0,0,0,2.98576729464223,1.0108910337347,0.841767423545896,0.260240885925407,0.229902104433473,0.180062129805349,0,0.136072998302656,0.2562274405697,0.187403449119458,0.258703370739016,0,0.756424320671277,0,0,0,0,0,0,5.61770549850588,7.97778512055617,10.5140494776369,0,0,0,0,0.196764231747404,0.308534225774757,0,0,0.350296027101508,0.16455984991348,0.32833492815819,0.486412857275134,0.146199987425332,1.53685080703735,3.75777972529041,0.210289948564127,0.102904612379284,2.97376904685418,2.90895623329899,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0,1.00534083520108,1.1937388322469,0.38992817423824,0,1.29682829924817,1.99141273254367,0.189667900953082,0.114248512609729,0,0.203651327845314,0.581857461502877,0.140271639780637,1.3279672796094,1.91893192373483,2.66897837330337,3.94870924549762,3.85388415213294,0.83422552858047,0.786235980452812,0.449724224769707,1.01430060694251,1.68824011826692,0.50925170356284,0.287696137450811,0.486405680325106,1.09824565275233,4.31304619582064,2.23284568601102,1.5601883655728,2.52578877947112,2.33216637578486,3.37710464954357,15.5192679739948,0,0.325929952884052,0,0,0,0,0.390267295715598,0.788175720530955,4.20782910332672,2.23236676120482,8.02930242107116,6.90739927463582,10.2700831592873,28.6503439484617,26.6513785071168,4.91764273019036,5.24279817978992,0,0.234423373184406,0,1.51482556322624,0,0.390438744296638,0,0,0,0,0,0,0.395287777946524,0.321321316421807,2.2710413633323,0,0,7.09371528781903,2.65490276679926,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0.948110273807448,1.05418608574999,0,1.70219802876894,0,0.129358683782755,0.214337035031592,0,0.178368817602071,0,0,3.75474732901937,0.63549621259146,1.10264199027481,11.8718102117866,0,0.0603129249281559,0,0.164140899745061,0.582961673259701,0.18542530201051,15.3783792718067,0.412773735926445,0.555583582109135,2.26042148405629,6.69801715833023,12.1252431799457,35.8654487287035,31.0692224158521,37.3139929271944,4.77335309007557,0,0.203319467126849,0,0,0,0,0.909188012978695,0.785267825952089,1.29614973291793,4.97071450469541,0,0,0,0.194451188344048,0.129159823477731,0,0,0.2604087696879,0.209718688851422,0.241584120826006,0.576060012515731,2.52808896502543,0.202725215290164,0.410843828659309,0.909445760844565,1.79026695667481,1.39076948346885,1.32214994471966,1.18151621739662,1.9183625490148,2.13379058634,2.21817607301049,3.60594158737084,3.84847366561318,4.79195298944433,1.58711268530648,0,0,0,2.12508553435409,3.75364950902364,4.76194223094889,1.2862102744744,3.51100472824754,0,0,0,0,0,0,0.675022500231806,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0.347652977834566,0,0,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0,0,0,0,0,0,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0,0,0.429742108096597,0.191288332068843,0.882365676478062,0.927471342481686 | |||
|short_description=p2@H2-Q8 | |||
}} |
Revision as of 14:24, 13 September 2013
Short description: | p2@H2-Q8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_H2-Q8_5end |
Coexpression cluster: | MCL_coexpression_mm9:319 |
Association with transcript: | 0bp_to_NM_023124, uc008chn.1_5end |
EntrezGene: | H2-Q8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 8.24e-13 | 48 |
immune system | 8.24e-13 | 48 |
hematopoietic system | 3.32e-11 | 45 |
blood island | 3.32e-11 | 45 |
endoderm-derived structure | 3.85e-11 | 118 |
endoderm | 3.85e-11 | 118 |
presumptive endoderm | 3.85e-11 | 118 |
digestive system | 5.17e-11 | 116 |
digestive tract | 5.17e-11 | 116 |
primitive gut | 5.17e-11 | 116 |
subdivision of digestive tract | 2.75e-10 | 114 |
endo-epithelium | 4.99e-10 | 69 |
gut epithelium | 5.95e-10 | 55 |
mixed endoderm/mesoderm-derived structure | 6.90e-09 | 35 |
connective tissue | 1.07e-08 | 46 |
adult organism | 1.11e-08 | 51 |
hemopoietic organ | 1.08e-07 | 29 |
immune organ | 1.08e-07 | 29 |
gland of gut | 4.84e-07 | 24 |
foregut | 5.11e-07 | 80 |
unilaminar epithelium | 5.50e-07 | 66 |
pharynx | 9.01e-07 | 24 |
upper respiratory tract | 9.01e-07 | 24 |
chordate pharynx | 9.01e-07 | 24 |
pharyngeal arch system | 9.01e-07 | 24 |
pharyngeal region of foregut | 9.01e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.