FFCP PHASE1:Mm9::chr17:47906140..47906150,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=21425|HGNC=|MCL_coexpression_id=404|UniProt=E9PXZ1,E9PWJ9|association_with_transcript=-36bp_to_ENSMUST00000159641,ENSMUST00000160373_5end|description=CAGE_peak_6_at_Tfeb_5end|id=chr17:47906140..47906150,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002092,2.76e-17,3;CL:0002540,2.76e-17,3;CL:0002476,1.31e-11,2;CL:0000839,2.93e-10,13;CL:0000553,1.08e-08,6;CL:0000556,1.08e-08,6;CL:0002320,2.27e-08,46;CL:0000134,2.27e-08,46;CL:0000763,2.63e-08,16;CL:0002031,2.80e-07,25;CL:0000049,5.75e-07,19;CL:0000219,5.97e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!1.21e-12!70;UBERON:0002193!1.91e-11!48;UBERON:0002371!1.55e-09!16;UBERON:0002390!3.44e-09!45;UBERON:0003061!3.44e-09!45;UBERON:0000926!1.85e-08!193;UBERON:0004120!1.85e-08!193;UBERON:0006603!1.85e-08!193;UBERON:0001474!3.94e-07!22;UBERON:0004765!3.94e-07!22;UBERON:0001434!3.94e-07!22;UBERON:0003887!8.27e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.13e-21,16;UBERON:0001474,7.81e-19,22;UBERON:0004765,7.81e-19,22;UBERON:0001434,7.81e-19,22;UBERON:0002465,1.15e-15,3;UBERON:0002204,1.59e-15,32;UBERON:0002193,2.60e-14,48;UBERON:0002405,2.60e-14,48;UBERON:0001962,7.80e-11,2;UBERON:0001961,7.80e-11,2;UBERON:0001744,7.80e-11,2;UBERON:0002390,1.27e-08,45;UBERON:0003061,1.27e-08,45;UBERON:0002384,2.27e-08,46|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0.666219523631325,0.404950534779652,0,2.83915948822414,3.15363197293199,2.97072756258621,0,0.198581902401771,0,1.27993938234725,1.14704640533585,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,1.57057123192139,0,0,0,0,0,0,0,0,0,0,0,0,1.51004345451963,0,0,0,0,0,0,0,0,0,0,3.1496490104849,4.94433181283487,3.5524005747305,0.599200221036809,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,2.58937883647172,1.03909497345377,0,0,0,0.150722640552623,0.23517741427141,0,0,0,2.65383165584962,0,0,0,0,0,0,0.255457055208591,0,0.599902730993408,0,0,0,0,0.173824320192276,0,0,0.162241263067758,0.101839363850316,0.248813941220186,0.252722758433675,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0.268273401399619,0,0,0,0.162137619091711,0,0.219550115291051,0,0,0,0.330418782983798,0,0,0.232236671860439,0,0,0,0.380451252225118,0,0,0,0,0,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0.147610147979602,0.156998727841375,0.123397163921801,0,0.166845105716094,0.196558995113203,0.224862112384854,0.405720242777006,0,0,0.287696137450811,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0.505157755894224,0,0.482443521363367,0.739012760666419,0,0,0,0,0,0,0,0.315270288212382,0.44292937929755,0,0.163863314715738,0.172684981865896,0.144649058581512,1.50791283939272,3.80733978673097,0.491764273019036,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0.304464949114599,0.23467170806371,0,0.441056796109924,0,0.161464426695906,0,0,0.164140899745061,0.291480836629851,0,2.73393409276564,0.619160603889667,0.185194527369712,0.376736914009382,0.27338845544205,0.686334519619568,0,0,0,0.954670618015114,0,0.203319467126849,0,0,0,0,0,0,0,1.24267862617385,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0.179026695667481,0,0.240390899039938,0,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p6@Tfeb}} | ||
|EntrezGene=21425 | |||
|HGNC= | |||
|MCL_coexpression_id=404 | |||
|UniProt=E9PXZ1,E9PWJ9 | |||
|association_with_transcript=-36bp_to_ENSMUST00000159641,ENSMUST00000160373_5end | |||
|description=CAGE_peak_6_at_Tfeb_5end | |||
|id=chr17:47906140..47906150,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,2.76e-17,3;CL:0002540,2.76e-17,3;CL:0002476,1.31e-11,2;CL:0000839,2.93e-10,13;CL:0000553,1.08e-08,6;CL:0000556,1.08e-08,6;CL:0002320,2.27e-08,46;CL:0000134,2.27e-08,46;CL:0000763,2.63e-08,16;CL:0002031,2.80e-07,25;CL:0000049,5.75e-07,19;CL:0000219,5.97e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.21e-12!70;UBERON:0002193!1.91e-11!48;UBERON:0002371!1.55e-09!16;UBERON:0002390!3.44e-09!45;UBERON:0003061!3.44e-09!45;UBERON:0000926!1.85e-08!193;UBERON:0004120!1.85e-08!193;UBERON:0006603!1.85e-08!193;UBERON:0001474!3.94e-07!22;UBERON:0004765!3.94e-07!22;UBERON:0001434!3.94e-07!22;UBERON:0003887!8.27e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.13e-21,16;UBERON:0001474,7.81e-19,22;UBERON:0004765,7.81e-19,22;UBERON:0001434,7.81e-19,22;UBERON:0002465,1.15e-15,3;UBERON:0002204,1.59e-15,32;UBERON:0002193,2.60e-14,48;UBERON:0002405,2.60e-14,48;UBERON:0001962,7.80e-11,2;UBERON:0001961,7.80e-11,2;UBERON:0001744,7.80e-11,2;UBERON:0002390,1.27e-08,45;UBERON:0003061,1.27e-08,45;UBERON:0002384,2.27e-08,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0.666219523631325,0.404950534779652,0,2.83915948822414,3.15363197293199,2.97072756258621,0,0.198581902401771,0,1.27993938234725,1.14704640533585,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,1.57057123192139,0,0,0,0,0,0,0,0,0,0,0,0,1.51004345451963,0,0,0,0,0,0,0,0,0,0,3.1496490104849,4.94433181283487,3.5524005747305,0.599200221036809,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0.307213066512487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,2.58937883647172,1.03909497345377,0,0,0,0.150722640552623,0.23517741427141,0,0,0,2.65383165584962,0,0,0,0,0,0,0.255457055208591,0,0.599902730993408,0,0,0,0,0.173824320192276,0,0,0.162241263067758,0.101839363850316,0.248813941220186,0.252722758433675,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0.268273401399619,0,0,0,0.162137619091711,0,0.219550115291051,0,0,0,0.330418782983798,0,0,0.232236671860439,0,0,0,0.380451252225118,0,0,0,0,0,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0.147610147979602,0.156998727841375,0.123397163921801,0,0.166845105716094,0.196558995113203,0.224862112384854,0.405720242777006,0,0,0.287696137450811,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0.505157755894224,0,0.482443521363367,0.739012760666419,0,0,0,0,0,0,0,0.315270288212382,0.44292937929755,0,0.163863314715738,0.172684981865896,0.144649058581512,1.50791283939272,3.80733978673097,0.491764273019036,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0.304464949114599,0.23467170806371,0,0.441056796109924,0,0.161464426695906,0,0,0.164140899745061,0.291480836629851,0,2.73393409276564,0.619160603889667,0.185194527369712,0.376736914009382,0.27338845544205,0.686334519619568,0,0,0,0.954670618015114,0,0.203319467126849,0,0,0,0,0,0,0,1.24267862617385,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0.179026695667481,0,0.240390899039938,0,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p6@Tfeb | |||
}} |
Revision as of 14:46, 13 September 2013
Short description: | p6@Tfeb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Tfeb_5end |
Coexpression cluster: | MCL_coexpression_mm9:404 |
Association with transcript: | -36bp_to_ENSMUST00000159641, ENSMUST00000160373_5end |
EntrezGene: | Tfeb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 2.76e-17 | 3 |
mesenchymal stem cell of the bone marrow | 2.76e-17 | 3 |
bone marrow macrophage | 1.31e-11 | 2 |
myeloid lineage restricted progenitor cell | 2.93e-10 | 13 |
megakaryocyte progenitor cell | 1.08e-08 | 6 |
megakaryocyte | 1.08e-08 | 6 |
connective tissue cell | 2.27e-08 | 46 |
mesenchymal cell | 2.27e-08 | 46 |
myeloid cell | 2.63e-08 | 16 |
hematopoietic lineage restricted progenitor cell | 2.80e-07 | 25 |
common myeloid progenitor | 5.75e-07 | 19 |
motile cell | 5.97e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.13e-21 | 16 |
bone element | 7.81e-19 | 22 |
skeletal element | 7.81e-19 | 22 |
skeletal system | 7.81e-19 | 22 |
lymphoid system | 1.15e-15 | 3 |
musculoskeletal system | 1.59e-15 | 32 |
hemolymphoid system | 2.60e-14 | 48 |
immune system | 2.60e-14 | 48 |
gut-associated lymphoid tissue | 7.80e-11 | 2 |
mucosa-associated lymphoid tissue | 7.80e-11 | 2 |
lymphoid tissue | 7.80e-11 | 2 |
hematopoietic system | 1.27e-08 | 45 |
blood island | 1.27e-08 | 45 |
connective tissue | 2.27e-08 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.