FFCP PHASE1:Mm9::chr18:10715046..10715048,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=124|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:10715046..10715048,+|id=chr18:10715046..10715048,+|ontology_enrichment_celltype=CL:0000553!1.14e-15!6;CL:0000556!1.14e-15!6;CL:0000414!8.09e-15!11;CL:0002027!1.99e-14!3;CL:0002006!1.99e-14!3;CL:0002024!1.99e-14!3;CL:0000839!1.08e-12!13;CL:0000115!5.74e-11!1;CL:0000213!5.74e-11!1;CL:0002078!5.74e-11!1;CL:0002262!5.74e-11!1;CL:1000398!5.74e-11!1;CL:0000050!1.14e-10!9;CL:0000763!2.21e-10!16;CL:0000049!8.52e-09!19;CL:0000063!3.98e-07!66;CL:0002031!9.38e-07!25|ontology_enrichment_celltype_v019_2=CL:0002027,1.70e-39,3;CL:0002006,1.70e-39,3;CL:0002024,1.70e-39,3;CL:0000839,5.26e-21,13;CL:0000553,1.98e-20,6;CL:0000556,1.98e-20,6;CL:0000763,2.72e-17,16;CL:0002476,1.33e-15,2;CL:0000049,9.58e-15,19;CL:0000050,4.91e-14,9;CL:0002031,1.80e-11,25;CL:0000988,3.42e-09,32;CL:0002032,3.42e-09,32;CL:0000037,3.42e-09,32;CL:0000837,3.42e-09,32;CL:0002194,1.73e-08,4;CL:0000766,1.73e-08,4;CL:0000234,1.73e-08,4;CL:0000576,1.73e-08,4;CL:0000235,1.73e-08,4;CL:0000864,1.73e-08,4;CL:0002009,1.73e-08,4;CL:0000040,1.73e-08,4;CL:0000559,1.73e-08,4|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000353!5.74e-11!1;UBERON:0003497!5.74e-11!1;UBERON:0003909!5.74e-11!1;UBERON:0003835!5.74e-11!1;UBERON:0003513!5.74e-11!1;UBERON:0001281!5.74e-11!1;UBERON:0001280!5.74e-11!1;UBERON:0004647!5.74e-11!1;UBERON:0002371!2.21e-10!16;UBERON:0002204!6.88e-08!32;UBERON:0001474!1.23e-07!22;UBERON:0004765!1.23e-07!22;UBERON:0001434!1.23e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.72e-17,16;UBERON:0001474,6.90e-13,22;UBERON:0004765,6.90e-13,22;UBERON:0001434,6.90e-13,22;UBERON:0002204,3.42e-09,32;UBERON:0002390,8.07e-07,45;UBERON:0003061,8.07e-07,45|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,3.84703008040669,8.39474253753776,0,0,0.84877930359606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr18:10715046..10715048,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=124 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:10715046..10715048,+ | |||
|id=chr18:10715046..10715048,+ | |||
|ontology_enrichment_celltype=CL:0000553!1.14e-15!6;CL:0000556!1.14e-15!6;CL:0000414!8.09e-15!11;CL:0002027!1.99e-14!3;CL:0002006!1.99e-14!3;CL:0002024!1.99e-14!3;CL:0000839!1.08e-12!13;CL:0000115!5.74e-11!1;CL:0000213!5.74e-11!1;CL:0002078!5.74e-11!1;CL:0002262!5.74e-11!1;CL:1000398!5.74e-11!1;CL:0000050!1.14e-10!9;CL:0000763!2.21e-10!16;CL:0000049!8.52e-09!19;CL:0000063!3.98e-07!66;CL:0002031!9.38e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,1.70e-39,3;CL:0002006,1.70e-39,3;CL:0002024,1.70e-39,3;CL:0000839,5.26e-21,13;CL:0000553,1.98e-20,6;CL:0000556,1.98e-20,6;CL:0000763,2.72e-17,16;CL:0002476,1.33e-15,2;CL:0000049,9.58e-15,19;CL:0000050,4.91e-14,9;CL:0002031,1.80e-11,25;CL:0000988,3.42e-09,32;CL:0002032,3.42e-09,32;CL:0000037,3.42e-09,32;CL:0000837,3.42e-09,32;CL:0002194,1.73e-08,4;CL:0000766,1.73e-08,4;CL:0000234,1.73e-08,4;CL:0000576,1.73e-08,4;CL:0000235,1.73e-08,4;CL:0000864,1.73e-08,4;CL:0002009,1.73e-08,4;CL:0000040,1.73e-08,4;CL:0000559,1.73e-08,4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000353!5.74e-11!1;UBERON:0003497!5.74e-11!1;UBERON:0003909!5.74e-11!1;UBERON:0003835!5.74e-11!1;UBERON:0003513!5.74e-11!1;UBERON:0001281!5.74e-11!1;UBERON:0001280!5.74e-11!1;UBERON:0004647!5.74e-11!1;UBERON:0002371!2.21e-10!16;UBERON:0002204!6.88e-08!32;UBERON:0001474!1.23e-07!22;UBERON:0004765!1.23e-07!22;UBERON:0001434!1.23e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.72e-17,16;UBERON:0001474,6.90e-13,22;UBERON:0004765,6.90e-13,22;UBERON:0001434,6.90e-13,22;UBERON:0002204,3.42e-09,32;UBERON:0002390,8.07e-07,45;UBERON:0003061,8.07e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,3.84703008040669,8.39474253753776,0,0,0.84877930359606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:10715046..10715048,+ | |||
}} |
Revision as of 15:40, 13 September 2013
Short description: | p@chr18:10715046..10715048, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:10715046..10715048, + |
Coexpression cluster: | MCL_coexpression_mm9:124 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 1.70e-39 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.70e-39 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.70e-39 | 3 |
myeloid lineage restricted progenitor cell | 5.26e-21 | 13 |
megakaryocyte progenitor cell | 1.98e-20 | 6 |
megakaryocyte | 1.98e-20 | 6 |
myeloid cell | 2.72e-17 | 16 |
bone marrow macrophage | 1.33e-15 | 2 |
common myeloid progenitor | 9.58e-15 | 19 |
megakaryocyte-erythroid progenitor cell | 4.91e-14 | 9 |
hematopoietic lineage restricted progenitor cell | 1.80e-11 | 25 |
hematopoietic cell | 3.42e-09 | 32 |
hematopoietic oligopotent progenitor cell | 3.42e-09 | 32 |
hematopoietic stem cell | 3.42e-09 | 32 |
hematopoietic multipotent progenitor cell | 3.42e-09 | 32 |
monopoietic cell | 1.73e-08 | 4 |
myeloid leukocyte | 1.73e-08 | 4 |
phagocyte | 1.73e-08 | 4 |
monocyte | 1.73e-08 | 4 |
macrophage | 1.73e-08 | 4 |
tissue-resident macrophage | 1.73e-08 | 4 |
macrophage dendritic cell progenitor | 1.73e-08 | 4 |
monoblast | 1.73e-08 | 4 |
promonocyte | 1.73e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.72e-17 | 16 |
bone element | 6.90e-13 | 22 |
skeletal element | 6.90e-13 | 22 |
skeletal system | 6.90e-13 | 22 |
musculoskeletal system | 3.42e-09 | 32 |
hematopoietic system | 8.07e-07 | 45 |
blood island | 8.07e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.