FFCP PHASE1:Mm9::chr18:13021367..13021374,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=64291|HGNC=|MCL_coexpression_id=2|UniProt=Q91XL9|association_with_transcript=48bp_to_ENSMUST00000121774_5end|description=CAGE_peak_30_at_Osbpl1a_5end|id=chr18:13021367..13021374,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,1.89e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!1.54e-14!10;UBERON:0000411!1.54e-14!10;UBERON:0001950!1.54e-14!10;UBERON:0000955!1.74e-12!50;UBERON:0006238!1.74e-12!50;UBERON:0001017!5.41e-12!73;UBERON:0005743!5.41e-12!73;UBERON:0002616!1.11e-11!49;UBERON:0000073!2.07e-11!75;UBERON:0001016!2.07e-11!75;UBERON:0000033!1.03e-10!63;UBERON:0004121!2.43e-10!102;UBERON:0000924!2.43e-10!102;UBERON:0006601!2.43e-10!102;UBERON:0002619!1.07e-08!17;UBERON:0001049!1.98e-08!52;UBERON:0005068!1.98e-08!52;UBERON:0006241!1.98e-08!52;UBERON:0007135!1.98e-08!52;UBERON:0000956!9.68e-08!21;UBERON:0001869!9.68e-08!21;UBERON:0000203!9.68e-08!21;UBERON:0002791!1.35e-07!29;UBERON:0003528!1.35e-07!29;UBERON:0001893!1.35e-07!29;UBERON:0002346!1.66e-07!71;UBERON:0003075!1.66e-07!71;UBERON:0007284!1.66e-07!71;UBERON:0007811!5.72e-07!86;UBERON:0003080!6.47e-07!40;UBERON:0003056!9.08e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.79e-29,10;UBERON:0000411,2.79e-29,10;UBERON:0001950,2.79e-29,10;UBERON:0002619,5.13e-17,17;UBERON:0000073,2.15e-14,54;UBERON:0000956,1.15e-13,21;UBERON:0001869,1.15e-13,21;UBERON:0000203,1.15e-13,21;UBERON:0001049,1.29e-12,52;UBERON:0005068,1.29e-12,52;UBERON:0006241,1.29e-12,52;UBERON:0007135,1.29e-12,52;UBERON:0003528,1.60e-12,29;UBERON:0002791,1.60e-12,29;UBERON:0001893,1.60e-12,29;UBERON:0001017,3.27e-12,73;UBERON:0002616,7.37e-12,46;UBERON:0001016,7.64e-12,75;UBERON:0000955,1.40e-11,47;UBERON:0006238,1.40e-11,47;UBERON:0002780,1.61e-11,39;UBERON:0001890,1.61e-11,39;UBERON:0006240,1.61e-11,39;UBERON:0003080,3.31e-11,40;UBERON:0002020,1.48e-10,34;UBERON:0002346,5.43e-10,64;UBERON:0003075,5.43e-10,64;UBERON:0007284,5.43e-10,64;UBERON:0004121,5.27e-09,95;UBERON:0000924,5.27e-09,95;UBERON:0006601,5.27e-09,95;UBERON:0003056,5.94e-09,49;UBERON:0010371,1.39e-08,73;UBERON:0004684,1.89e-08,3;UBERON:0002275,1.89e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,1.10115880999389,1.27687338085188,0.768032666281217,0,0.0914876436024097,0,1.11673199600552,0,0.45839474333043,0,0,0,0,0,0,0.860423876981386,0.679971333707751,0,0.649776417447669,0,0.280888840263504,0,0,0,0,1.28326477414318,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0,0,0,0,0,0,0.161766849947409,0,0,0,1.17112318804619,0.83778682725382,0,0,0,0,0.149790639404823,0,0,0.521472960576829,0.767146371990992,1.87009240103604,0.811206315338788,0,0,0,0,0,0.229902104433473,0.180062129805349,0,0.0680364991513279,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0.180062061461015,0.473489471170421,0,0.308534225774757,0,0.804820204198858,0,0.16455984991348,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.937693492737625,0,0.504941854408746,0,0,0,0.238968797952552,0.222798674082394,0,0.404810701674894,0,0.395287777946524,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0.492422699235184,0,1.48340241608408,0,0,0,0.188368457004691,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,3.22227665555024,2.86447756719698,2.57779773515531,3.42541259885321,2.2661816921691,0.675022500231806,0.900642406448441,0.906284817968409,2.07104124700728,0.207574695168353,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.17230640686684,0,0,0.192909220463705,0,0.294397840268795,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0.271608227691724,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0|short_description=p30@Osbpl1a}} | ||
|EntrezGene=64291 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=Q91XL9 | |||
|association_with_transcript=48bp_to_ENSMUST00000121774_5end | |||
|description=CAGE_peak_30_at_Osbpl1a_5end | |||
|id=chr18:13021367..13021374,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.89e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!1.54e-14!10;UBERON:0000411!1.54e-14!10;UBERON:0001950!1.54e-14!10;UBERON:0000955!1.74e-12!50;UBERON:0006238!1.74e-12!50;UBERON:0001017!5.41e-12!73;UBERON:0005743!5.41e-12!73;UBERON:0002616!1.11e-11!49;UBERON:0000073!2.07e-11!75;UBERON:0001016!2.07e-11!75;UBERON:0000033!1.03e-10!63;UBERON:0004121!2.43e-10!102;UBERON:0000924!2.43e-10!102;UBERON:0006601!2.43e-10!102;UBERON:0002619!1.07e-08!17;UBERON:0001049!1.98e-08!52;UBERON:0005068!1.98e-08!52;UBERON:0006241!1.98e-08!52;UBERON:0007135!1.98e-08!52;UBERON:0000956!9.68e-08!21;UBERON:0001869!9.68e-08!21;UBERON:0000203!9.68e-08!21;UBERON:0002791!1.35e-07!29;UBERON:0003528!1.35e-07!29;UBERON:0001893!1.35e-07!29;UBERON:0002346!1.66e-07!71;UBERON:0003075!1.66e-07!71;UBERON:0007284!1.66e-07!71;UBERON:0007811!5.72e-07!86;UBERON:0003080!6.47e-07!40;UBERON:0003056!9.08e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.79e-29,10;UBERON:0000411,2.79e-29,10;UBERON:0001950,2.79e-29,10;UBERON:0002619,5.13e-17,17;UBERON:0000073,2.15e-14,54;UBERON:0000956,1.15e-13,21;UBERON:0001869,1.15e-13,21;UBERON:0000203,1.15e-13,21;UBERON:0001049,1.29e-12,52;UBERON:0005068,1.29e-12,52;UBERON:0006241,1.29e-12,52;UBERON:0007135,1.29e-12,52;UBERON:0003528,1.60e-12,29;UBERON:0002791,1.60e-12,29;UBERON:0001893,1.60e-12,29;UBERON:0001017,3.27e-12,73;UBERON:0002616,7.37e-12,46;UBERON:0001016,7.64e-12,75;UBERON:0000955,1.40e-11,47;UBERON:0006238,1.40e-11,47;UBERON:0002780,1.61e-11,39;UBERON:0001890,1.61e-11,39;UBERON:0006240,1.61e-11,39;UBERON:0003080,3.31e-11,40;UBERON:0002020,1.48e-10,34;UBERON:0002346,5.43e-10,64;UBERON:0003075,5.43e-10,64;UBERON:0007284,5.43e-10,64;UBERON:0004121,5.27e-09,95;UBERON:0000924,5.27e-09,95;UBERON:0006601,5.27e-09,95;UBERON:0003056,5.94e-09,49;UBERON:0010371,1.39e-08,73;UBERON:0004684,1.89e-08,3;UBERON:0002275,1.89e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,1.10115880999389,1.27687338085188,0.768032666281217,0,0.0914876436024097,0,1.11673199600552,0,0.45839474333043,0,0,0,0,0,0,0.860423876981386,0.679971333707751,0,0.649776417447669,0,0.280888840263504,0,0,0,0,1.28326477414318,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0,0,0,0,0,0,0.161766849947409,0,0,0,1.17112318804619,0.83778682725382,0,0,0,0,0.149790639404823,0,0,0.521472960576829,0.767146371990992,1.87009240103604,0.811206315338788,0,0,0,0,0,0.229902104433473,0.180062129805349,0,0.0680364991513279,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0.180062061461015,0.473489471170421,0,0.308534225774757,0,0.804820204198858,0,0.16455984991348,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.937693492737625,0,0.504941854408746,0,0,0,0.238968797952552,0.222798674082394,0,0.404810701674894,0,0.395287777946524,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0.492422699235184,0,1.48340241608408,0,0,0,0.188368457004691,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,3.22227665555024,2.86447756719698,2.57779773515531,3.42541259885321,2.2661816921691,0.675022500231806,0.900642406448441,0.906284817968409,2.07104124700728,0.207574695168353,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.17230640686684,0,0,0.192909220463705,0,0.294397840268795,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0.271608227691724,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p30@Osbpl1a | |||
}} |
Revision as of 15:43, 13 September 2013
Short description: | p30@Osbpl1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_30_at_Osbpl1a_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 48bp_to_ENSMUST00000121774_5end |
EntrezGene: | Osbpl1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.89e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.79e-29 | 10 |
visual cortex | 2.79e-29 | 10 |
neocortex | 2.79e-29 | 10 |
regional part of cerebral cortex | 5.13e-17 | 17 |
regional part of nervous system | 2.15e-14 | 54 |
cerebral cortex | 1.15e-13 | 21 |
cerebral hemisphere | 1.15e-13 | 21 |
pallium | 1.15e-13 | 21 |
neural tube | 1.29e-12 | 52 |
neural rod | 1.29e-12 | 52 |
future spinal cord | 1.29e-12 | 52 |
neural keel | 1.29e-12 | 52 |
brain grey matter | 1.60e-12 | 29 |
regional part of telencephalon | 1.60e-12 | 29 |
telencephalon | 1.60e-12 | 29 |
central nervous system | 3.27e-12 | 73 |
regional part of brain | 7.37e-12 | 46 |
nervous system | 7.64e-12 | 75 |
brain | 1.40e-11 | 47 |
future brain | 1.40e-11 | 47 |
regional part of forebrain | 1.61e-11 | 39 |
forebrain | 1.61e-11 | 39 |
future forebrain | 1.61e-11 | 39 |
anterior neural tube | 3.31e-11 | 40 |
gray matter | 1.48e-10 | 34 |
neurectoderm | 5.43e-10 | 64 |
neural plate | 5.43e-10 | 64 |
presumptive neural plate | 5.43e-10 | 64 |
ectoderm-derived structure | 5.27e-09 | 95 |
ectoderm | 5.27e-09 | 95 |
presumptive ectoderm | 5.27e-09 | 95 |
pre-chordal neural plate | 5.94e-09 | 49 |
ecto-epithelium | 1.39e-08 | 73 |
raphe nuclei | 1.89e-08 | 3 |
reticular formation | 1.89e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.