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FFCP PHASE1:Mm9::chr18:35931330..35931364,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=56550|HGNC=|MCL_coexpression_id=1410|UniProt=P62838|association_with_transcript=74bp_to_ENSMUST00000167406_5end|description=CAGE_peak_2_at_Ube2d2_5end|id=chr18:35931330..35931364,+|ontology_enrichment_celltype=CL:0000117!1.08e-12!23;CL:0000337!1.08e-12!23;CL:0000540!7.94e-12!33;CL:0000047!7.94e-12!33;CL:0000031!7.94e-12!33;CL:0000404!7.94e-12!33;CL:0000221!1.14e-11!44;CL:0000133!1.14e-11!44;CL:0002319!3.05e-11!43;CL:0000393!9.28e-09!39;CL:0000211!9.28e-09!39;CL:0000055!5.63e-08!50;CL:0000034!7.13e-08!97;CL:0000723!3.91e-07!91;CL:0000048!3.91e-07!91|ontology_enrichment_celltype_v019_2=CL:0000117,1.08e-12,23;CL:0000337,1.08e-12,23;CL:0000540,7.94e-12,33;CL:0000047,7.94e-12,33;CL:0000031,7.94e-12,33;CL:0000404,7.94e-12,33;CL:0000221,1.14e-11,44;CL:0000133,1.14e-11,44;CL:0002319,3.05e-11,43;CL:0000393,9.28e-09,39;CL:0000211,9.28e-09,39;CL:0000034,7.13e-08,97;CL:0000723,3.91e-07,91;CL:0000048,3.91e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.87e-12!75;UBERON:0001016!6.87e-12!75;UBERON:0001017!2.40e-11!73;UBERON:0005743!2.40e-11!73;UBERON:0004121!2.88e-09!102;UBERON:0000924!2.88e-09!102;UBERON:0006601!2.88e-09!102;UBERON:0001049!4.06e-08!52;UBERON:0005068!4.06e-08!52;UBERON:0006241!4.06e-08!52;UBERON:0007135!4.06e-08!52;UBERON:0000033!1.05e-07!63;UBERON:0002346!2.07e-07!71;UBERON:0003075!2.07e-07!71;UBERON:0007284!2.07e-07!71;UBERON:0000153!2.24e-07!94;UBERON:0002020!3.86e-07!34;UBERON:0000955!4.07e-07!50;UBERON:0006238!4.07e-07!50;UBERON:0002616!5.54e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.87e-12,75;UBERON:0001017,2.40e-11,73;UBERON:0004121,8.68e-11,95;UBERON:0000924,8.68e-11,95;UBERON:0006601,8.68e-11,95;UBERON:0002346,4.16e-09,64;UBERON:0003075,4.16e-09,64;UBERON:0007284,4.16e-09,64;UBERON:0000073,6.37e-09,54;UBERON:0001049,4.06e-08,52;UBERON:0005068,4.06e-08,52;UBERON:0006241,4.06e-08,52;UBERON:0007135,4.06e-08,52;UBERON:0010371,4.93e-08,73;UBERON:0002020,3.86e-07,34|phase1_expression=7.8472935081349,3.48975407639361,4.09499315450582,3.0246421130683,3.00537437967808,4.19698179779725,5.60670337429262,7.618276083053,6.19470377467334,6.78787126333781,6.33506482434368,4.14815226775749,6.33442700745461,8.91688104673774,4.33042690360362,4.25198061518635,6.99561878128147,8.20201629931418,9.1866670515845,7.63901373236454,7.90902598404949,3.27660138962921,4.70159620450084,4.63978026100879,4.5881856213434,2.8711598205751,4.73838195774982,4.09395342103189,4.3705386474966,3.2763916868791,3.99114919179548,1.90509202037889,3.69038872550742,0,4.04392267651784,4.48833542467929,3.47087905646027,12.9744805528441,14.8453715459522,12.0410461113974,14.7057872007754,17.7591826089196,19.9059244742773,2.01434908760924,2.23029248682932,4.77221555620372,10.1710874765245,5.23260375313072,4.39372365468944,4.6663175777828,2.79972843250725,7.18762821824858,14.2615215149076,8.70434570413613,12.4354705682712,5.14518872071894,3.72493471920384,7.73508138416164,12.1389876515759,19.0436752537932,10.775133859605,4.06613438482959,4.4464739805557,3.5995988691256,6.92206453796882,4.9733608046227,5.69240209984969,11.5265491596466,13.894408049336,8.77538599155989,11.7781978356774,13.139945282575,7.73039893330647,10.534208732486,9.68039257284187,13.7882817991503,9.91042928994498,8.81042632787795,7.52672012955593,13.8480602116704,12.2593442427229,9.37644067002168,7.81712397203867,8.4414391504752,9.0150966188318,9.72274332063103,8.96941589034349,10.6247684120421,8.25415507331706,6.95258352982427,7.53647670624362,0.860423876981386,4.75979933595425,3.77792234146472,3.24888208723835,3.13618820968135,4.21333260395256,4.60161870960756,6.49465011507172,7.42013106471715,8.87313544593087,3.84979432242953,7.64415719119937,7.11066703153331,3.89683873820185,7.60079596425296,3.53867111510348,3.9964357901671,9.32176381129818,3.71105347662062,3.81667718885499,6.08930956624282,4.38169444786511,4.22023393547343,5.05631440683531,4.90099706185734,7.41584903203122,5.35017620603673,3.5384422077995,5.3383060482645,4.85851340612866,2.90925151881133,1.86391761218122,6.73395833126558,5.86450779077674,3.57639877292028,6.58983184782562,8.39863823390771,7.87835407853001,7.04016005202667,9.15001205637253,12.1884721549478,6.95297280769106,5.62574006126727,6.2336413367868,5.353961681236,9.47106083807942,4.85187185379363,7.83440551144392,4.62972082950243,6.63614259109789,6.43725892413724,8.64298223065676,5.12396380641431,7.96027040070536,7.94305065766069,8.90166383317424,4.65666067330228,5.82033580918674,4.72765200419548,7.5658983390498,8.54863356467542,7.78532297831674,5.2237824978325,5.96768195583036,4.77682240364384,6.31991868581911,6.69104558498259,6.25159698670304,6.00664740352955,5.15957331958412,5.40186184383045,5.91861838963026,2.95146347621106,4.31947916084659,4.88321283975857,2.68273401399619,7.12268588439734,4.93679549740441,4.26835406605648,3.97237166774693,3.94739966048397,4.61055242111206,2.81833479396781,5.88811855979556,12.8630765474106,1.98251269790279,3.7023079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|EntrezGene=56550
|HGNC=
|MCL_coexpression_id=1410
|UniProt=P62838
|association_with_transcript=74bp_to_ENSMUST00000167406_5end
|description=CAGE_peak_2_at_Ube2d2_5end
|id=chr18:35931330..35931364,+
|ontology_enrichment_celltype=CL:0000117!1.08e-12!23;CL:0000337!1.08e-12!23;CL:0000540!7.94e-12!33;CL:0000047!7.94e-12!33;CL:0000031!7.94e-12!33;CL:0000404!7.94e-12!33;CL:0000221!1.14e-11!44;CL:0000133!1.14e-11!44;CL:0002319!3.05e-11!43;CL:0000393!9.28e-09!39;CL:0000211!9.28e-09!39;CL:0000055!5.63e-08!50;CL:0000034!7.13e-08!97;CL:0000723!3.91e-07!91;CL:0000048!3.91e-07!91
|ontology_enrichment_celltype_v019_2=CL:0000117,1.08e-12,23;CL:0000337,1.08e-12,23;CL:0000540,7.94e-12,33;CL:0000047,7.94e-12,33;CL:0000031,7.94e-12,33;CL:0000404,7.94e-12,33;CL:0000221,1.14e-11,44;CL:0000133,1.14e-11,44;CL:0002319,3.05e-11,43;CL:0000393,9.28e-09,39;CL:0000211,9.28e-09,39;CL:0000034,7.13e-08,97;CL:0000723,3.91e-07,91;CL:0000048,3.91e-07,91
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!6.87e-12!75;UBERON:0001016!6.87e-12!75;UBERON:0001017!2.40e-11!73;UBERON:0005743!2.40e-11!73;UBERON:0004121!2.88e-09!102;UBERON:0000924!2.88e-09!102;UBERON:0006601!2.88e-09!102;UBERON:0001049!4.06e-08!52;UBERON:0005068!4.06e-08!52;UBERON:0006241!4.06e-08!52;UBERON:0007135!4.06e-08!52;UBERON:0000033!1.05e-07!63;UBERON:0002346!2.07e-07!71;UBERON:0003075!2.07e-07!71;UBERON:0007284!2.07e-07!71;UBERON:0000153!2.24e-07!94;UBERON:0002020!3.86e-07!34;UBERON:0000955!4.07e-07!50;UBERON:0006238!4.07e-07!50;UBERON:0002616!5.54e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.87e-12,75;UBERON:0001017,2.40e-11,73;UBERON:0004121,8.68e-11,95;UBERON:0000924,8.68e-11,95;UBERON:0006601,8.68e-11,95;UBERON:0002346,4.16e-09,64;UBERON:0003075,4.16e-09,64;UBERON:0007284,4.16e-09,64;UBERON:0000073,6.37e-09,54;UBERON:0001049,4.06e-08,52;UBERON:0005068,4.06e-08,52;UBERON:0006241,4.06e-08,52;UBERON:0007135,4.06e-08,52;UBERON:0010371,4.93e-08,73;UBERON:0002020,3.86e-07,34
|phase1_expression=7.8472935081349,3.48975407639361,4.09499315450582,3.0246421130683,3.00537437967808,4.19698179779725,5.60670337429262,7.618276083053,6.19470377467334,6.78787126333781,6.33506482434368,4.14815226775749,6.33442700745461,8.91688104673774,4.33042690360362,4.25198061518635,6.99561878128147,8.20201629931418,9.1866670515845,7.63901373236454,7.90902598404949,3.27660138962921,4.70159620450084,4.63978026100879,4.5881856213434,2.8711598205751,4.73838195774982,4.09395342103189,4.3705386474966,3.2763916868791,3.99114919179548,1.90509202037889,3.69038872550742,0,4.04392267651784,4.48833542467929,3.47087905646027,12.9744805528441,14.8453715459522,12.0410461113974,14.7057872007754,17.7591826089196,19.9059244742773,2.01434908760924,2.23029248682932,4.77221555620372,10.1710874765245,5.23260375313072,4.39372365468944,4.6663175777828,2.79972843250725,7.18762821824858,14.2615215149076,8.70434570413613,12.4354705682712,5.14518872071894,3.72493471920384,7.73508138416164,12.1389876515759,19.0436752537932,10.775133859605,4.06613438482959,4.4464739805557,3.5995988691256,6.92206453796882,4.9733608046227,5.69240209984969,11.5265491596466,13.894408049336,8.77538599155989,11.7781978356774,13.139945282575,7.73039893330647,10.534208732486,9.68039257284187,13.7882817991503,9.91042928994498,8.81042632787795,7.52672012955593,13.8480602116704,12.2593442427229,9.37644067002168,7.81712397203867,8.4414391504752,9.0150966188318,9.72274332063103,8.96941589034349,10.6247684120421,8.25415507331706,6.95258352982427,7.53647670624362,0.860423876981386,4.75979933595425,3.77792234146472,3.24888208723835,3.13618820968135,4.21333260395256,4.60161870960756,6.49465011507172,7.42013106471715,8.87313544593087,3.84979432242953,7.64415719119937,7.11066703153331,3.89683873820185,7.60079596425296,3.53867111510348,3.9964357901671,9.32176381129818,3.71105347662062,3.81667718885499,6.08930956624282,4.38169444786511,4.22023393547343,5.05631440683531,4.90099706185734,7.41584903203122,5.35017620603673,3.5384422077995,5.3383060482645,4.85851340612866,2.90925151881133,1.86391761218122,6.73395833126558,5.86450779077674,3.57639877292028,6.58983184782562,8.39863823390771,7.87835407853001,7.04016005202667,9.15001205637253,12.1884721549478,6.95297280769106,5.62574006126727,6.2336413367868,5.353961681236,9.47106083807942,4.85187185379363,7.83440551144392,4.62972082950243,6.63614259109789,6.43725892413724,8.64298223065676,5.12396380641431,7.96027040070536,7.94305065766069,8.90166383317424,4.65666067330228,5.82033580918674,4.72765200419548,7.5658983390498,8.54863356467542,7.78532297831674,5.2237824978325,5.96768195583036,4.77682240364384,6.31991868581911,6.69104558498259,6.25159698670304,6.00664740352955,5.15957331958412,5.40186184383045,5.91861838963026,2.95146347621106,4.31947916084659,4.88321283975857,2.68273401399619,7.12268588439734,4.93679549740441,4.26835406605648,3.97237166774693,3.94739966048397,4.61055242111206,2.81833479396781,5.88811855979556,12.8630765474106,1.98251269790279,3.70230793328962,4.69234151177515,5.57368012465052,5.28356591420583,4.03367049246685,3.55804870151792,3.61428689613862,3.79623249235609,5.59976446061637,4.02136334080431,3.78017296878187,4.874102177978,3.59527763461689,3.8904848977445,3.78368419183298,8.53505554288868,5.59817711787671,5.63538678365402,6.10953983535943,5.23671715352589,7.22398944870281,5.12215950706484,4.57591458736767,3.92496819603437,2.71473760627961,1.77871576252289,2.8363667971736,2.94838492669805,1.34917267430912,2.43432145666204,2.65294875727659,2.80088436959562,2.5892652370573,5.99900339067631,1.92192989231657,8.62609239164127,4.09355042435354,2.80833905803104,3.78868316920668,2.15276896226295,1.92977408545347,5.91210208533135,7.01118223550794,6.84452901056509,5.94107800213158,4.92849521405854,5.52770649557992,8.09348379012447,8.97614780145875,5.83250033192907,6.42247599981447,7.49437412690189,5.07976275618788,6.90739927463582,7.23245292907558,7.53956419696361,5.4390568381871,2.45882136509518,3.31124095565679,8.50918126935297,7.73597131508541,3.60656879828686,3.02965112645248,5.67914794949262,10.9322848403059,4.52389135238878,5.4962823529087,4.67877215573028,9.6246020468203,4.85772842009873,6.13737301613755,7.11518000303742,6.74774764485795,5.81954349353901,5.52003371368491,9.28455668315384,8.08353602565424,5.30980553359851,5.09839335925461,3.93020624054176,5.46954731292105,4.72483028609236,4.61152721915891,6.20227903603731,8.72480950746013,4.63446591900138,3.79244109522979,5.27093042874994,3.09406629744561,3.06395645178409,4.32146625675145,6.72665155670323,5.35842587578981,6.56158864476412,6.0645397984704,6.74650984468696,8.52501857520878,3.98941903708308,5.93129798418696,2.20528398054962,4.28704257647848,6.62004149453213,5.60910201831849,4.53614907211919,5.0883678920969,2.33184669303881,7.41701208042039,3.58828849675491,5.15967169908056,4.44466865687308,2.26042148405629,2.46049609897845,3.43167259809784,10.7086410896129,9.93655311497972,12.0233977209849,2.86401185404534,7.43389584915668,8.3360981522008,5.18425635944646,5.43629569637619,2.83871332870031,3.37160865962052,4.79390043206948,3.66458318777641,3.24037433229482,4.34937519160848,40.0221986465775,4.78452947340732,6.9492565991981,4.66682852025714,4.52059382172059,5.91346439217724,7.98029222791127,6.90083239672936,5.24296722128554,16.6693043369944,23.3304305068871,6.95224465381992,3.24360344464263,3.49217254360413,4.15746633528944,4.65469408735452,4.96703386953162,4.80781798079875,6.79371825003055,4.34155734777035,6.24895814570999,5.04130925684203,4.38560463328886,5.09922760693746,6.19447581562315,2.72076460338254,5.99362074109975,3.58855426437903,5.20442310728643,5.79568782096571,3.75364950902364,4.02933573387983,4.28736758158132,2.00628841614145,6.7770221114048,8.28585425712918,5.15605962095457,7.21783365843488,4.7955776383945,6.7985450765073,4.05013500139084,3.60256962579376,4.53142408984205,1.55328093525546,8.61434984948666,6.78342284781753,5.46347538413229,4.37592090722929,11.1094976192831,8.27295788025063,5.778414922842,6.59312183164461,6.09746498224449,5.05394423527595,5.0695859978048,7.54505365544305,4.775716880964,4.73786127796033,5.80098236451694,3.33405583898152,4.51948871184936,4.43691207066522,5.76920261124629,4.71036544430071,7.20025430009372,6.38912902173615,5.00715998889374,4.21504608233753,5.55245344450451,4.39995961036718,3.84148743032822,5.26139422875686,4.6173398707593,4.48913817326191,6.52492599682958,5.1222330835293,6.54769669071503,3.40861050609125,4.82266527452853,6.24526444844865,3.27504251823572,4.94203424311086,6.88637995447836,3.97064554415128,6.02856372613096
|short_description=p2@Ube2d2
}}

Revision as of 16:01, 13 September 2013

Short description:p2@Ube2d2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ube2d2_5end
Coexpression cluster:MCL_coexpression_mm9:1410
Association with transcript: 74bp_to_ENSMUST00000167406_5end
EntrezGene:Ube2d2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ube2d2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.85
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.61
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97.62
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.19
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.79
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E66.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.15
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.33
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E88.92
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.25
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A28.20
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A49.19
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.64
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.70
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.59
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I14.74
GP2+ M cell, pool3.CNhs13240.11847-124I24.09
Ileum epithelium, pool1.CNhs13199.10252-104B94.37
Ileum epithelium, pool2.CNhs13232.10253-104C13.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.04
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G812.97
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H114.85
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H312.04
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G914.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H217.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H419.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.23
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.77
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.23
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.39
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.67
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A214.26
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I98.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A112.44
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.15
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.74
Mouse Granule cells, donor1.CNhs12131.11713-123C312.14
Mouse Granule cells, donor2.CNhs12357.11731-123E319.04
Mouse Granule cells, donor3.CNhs12108.11636-122C710.78
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.07
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C85.69
Mouse Microglia, donor2.CNhs12634.11736-123E811.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D513.89
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.78
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.53
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D613.79
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.26
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.82
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.02
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.72
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.97
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.62
Mouse Schwann, donor1.CNhs12507.11728-123D98.25
Mouse Schwann, donor2.CNhs12573.11746-123F96.95
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.54
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E36.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.42
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.87
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.90
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.00
accessory axillary lymph node, adult.CNhs10475.1063-29H99.32
adrenal gland, adult.CNhs10508.49-24D73.71
adrenal gland, embryo E14.CNhs11038.406-44C53.82
adrenal gland, embryo E16.CNhs11004.1254-43D66.09
adrenal gland, embryo E17.CNhs11043.1263-45I14.38
adrenal gland, embryo E18.CNhs11026.1262-18F54.22
adrenal gland, neonate N00.CNhs11191.1311-23C15.06
adrenal gland, neonate N25.CNhs11223.1377-27I34.90
amnion, adult pregnant day17.5.CNhs10488.583-22A87.42
aorta, adult.CNhs10498.46-23H15.35
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F55.34
bone (os femoris), neonate N16.CNhs11225.1525-43A64.86
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B26.73
cerebellum, neonate N30.CNhs11135.1395-42I25.86
colon, adult.CNhs10468.36-18H73.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C76.59
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D18.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D47.88
corpora quadrigemina, adult.CNhs10501.16-22A47.04
corpus striatum, adult.CNhs10487.19-21D89.15
corpus striatum, neonate N00.CNhs11226.630-43F112.19
cortex, adult.CNhs10473.12-14D56.95
cortex, neonate N30.CNhs11107.1392-42F25.63
diencephalon, adult.CNhs10482.20-12F26.23
diencephalon, neonate N30.CNhs11201.1388-42B25.35
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.47
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.85
epididymis, adult.CNhs10490.58-23B27.83
eyeball, adult.CNhs10484.31-12G44.63
eyeball, embryo E12.CNhs11016.345-16C66.64
eyeball, embryo E14.CNhs10521.399-16E26.44
eyeball, embryo E15.CNhs10593.426-16C98.64
eyeball, embryo E17.CNhs11023.1261-18D45.12
eyeball, neonate N00.CNhs11207.633-15C67.96
eyeball, neonate N01.CNhs11140.1532-43E77.94
eyeball, neonate N02.CNhs11205.1551-44G88.90
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E25.82
forelimb, embryo E12.CNhs10600.359-14H24.73
forelimb, embryo E13.CNhs10589.384-1E27.57
forelimb, embryo E14.CNhs10577.413-26A88.55
forelimb, embryo E15.CNhs11007.437-20E77.79
forelimb, embryo E17.CNhs10598.1517-43C45.22
forelimb, embryo E18.CNhs11008.1520-43B55.97
gonad, embryo E13.CNhs11044.1564-45I64.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.69
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.25
heart, embryo E11.CNhs10586.331-24E96.01
heart, embryo E12.CNhs11015.353-12F55.16
heart, embryo E13.CNhs11013.376-3I95.40
heart, embryo E14.CNhs10597.403-26D45.92
heart, embryo E15.CNhs11017.431-16C82.95
heart, embryo E16.CNhs11021.457-17C64.32
heart, embryo E17.CNhs11025.479-18E54.88
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E37.12
heart, neonate N03.CNhs11221.1349-25I24.94
heart, neonate N10.CNhs11118.749-24G14.27
heart, neonate N16.CNhs11209.782-15G13.97
heart, neonate N20.CNhs11127.821-26I63.95
heart, neonate N25.CNhs11196.1351-25D34.61
heart, neonate N30.CNhs11202.1390-42D22.82
hippocampus, adult.CNhs10478.13-16E85.89
hippocampus, neonate N00.CNhs11228.627-43G112.86
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A33.70
intestine, embryo E12.CNhs11019.1251-16I54.69
intestine, embryo E13.CNhs11010.381-16D55.57
intestine, embryo E15.CNhs10602.976-16D85.28
intestine, embryo E16.CNhs10585.463-22H44.03
intestine, embryo E17.CNhs10582.482-18D33.56
intestine, embryo E18.CNhs10526.1289-20F73.61
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E95.60
intestine, neonate N06.CNhs11102.688-20B84.02
intestine, neonate N07.CNhs11095.720-20F23.78
intestine, neonate N10.CNhs11098.755-23A54.87
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E33.89
intestine, neonate N30.CNhs11131.1384-42G13.78
kidney, embryo E14.CNhs10606.411-4I98.54
kidney, embryo E15.CNhs10997.434-16F85.60
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I26.11
kidney, embryo E18.CNhs11001.1288-20C75.24
kidney, neonate N00.CNhs11214.646-21G77.22
kidney, neonate N10.CNhs11206.758-6D55.12
kidney, neonate N20.CNhs11113.832-19I14.58
kidney, neonate N25.CNhs11122.1353-25F33.92
kidney, neonate N30.CNhs11203.1385-42H12.71
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F82.84
liver, embryo E13.CNhs10524.378-3H62.95
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D72.43
liver, embryo E16.CNhs10523.462-17F52.65
liver, embryo E17.CNhs10510.481-18A32.80
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F46.00
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H12.15
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B15.91
lung, embryo E12.CNhs10522.354-16G27.01
lung, embryo E14.CNhs10604.404-26F86.84
lung, embryo E15.CNhs11020.432-17C55.94
lung, embryo E16.CNhs10998.458-17B64.93
lung, embryo E17.CNhs10605.480-44A65.53
lung, embryo E18.CNhs10583.1287-20I68.09
lung, neonate N00.CNhs11224.640-42C68.98
lung, neonate N06.CNhs11212.683-20E55.83
lung, neonate N07.CNhs11111.715-19A36.42
lung, neonate N10.CNhs11219.750-23E67.49
lung, neonate N20.CNhs11109.822-18A45.08
lung, neonate N25.CNhs11119.1359-25C76.91
lung, neonate N30.CNhs11133.1394-42H27.23
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.44
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C28.51
medulla oblongata, neonate N30.CNhs11200.1396-42A37.74
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.61
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.68
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.93
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.52
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.50
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.62
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.14
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.12
olfactory brain, adult.CNhs10489.18-22I96.75
ovary, adult.CNhs10507.91-2I75.82
ovary, embryo E18.CNhs11040.505-44H75.52
ovary, neonate N00.CNhs11217.1299-22I49.28
oviduct, adult pregnant day01.CNhs10500.988-6G68.08
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F45.10
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E55.47
pancreas, embryo E17.CNhs10599.1558-45G34.72
pancreas, embryo E18.CNhs10580.1535-43I74.61
pancreas, neonate N00.CNhs11105.645-26G96.20
pancreas, neonate N01.CNhs11138.1531-43D78.72
pancreas, neonate N02.CNhs11139.1539-43D84.63
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E64.32
pituitary gland, embryo E13.CNhs11009.370-44C76.73
pituitary gland, embryo E14.CNhs11037.398-44A55.36
pituitary gland, embryo E15.CNhs10592.427-16B96.56
pituitary gland, embryo E16.CNhs11036.449-43F66.06
pituitary gland, embryo E17.CNhs11039.1265-44F56.75
pituitary gland, neonate N00.CNhs11190.1308-22E98.53
placenta, adult pregnant day10.CNhs10472.539-13I73.99
placenta, adult pregnant day17.CNhs10464.577-18G35.93
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C34.29
skin, neonate N00.CNhs11124.650-25G46.62
skin, neonate N03.CNhs11215.662-22H35.61
skin, neonate N06.CNhs11097.693-20I54.54
skin, neonate N10.CNhs11108.762-6C45.09
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C97.42
spleen, adult.CNhs10465.25-2G23.59
spleen, embryo E16.CNhs11035.461-43C15.16
spleen, embryo E18.CNhs11011.1271-21F24.44
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H12.46
spleen, neonate N25.CNhs11099.1354-25G33.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C610.71
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C99.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D312.02
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E37.43
stomach, embryo E15.CNhs10603.1252-16G88.34
stomach, embryo E16.CNhs11022.459-17D45.18
stomach, embryo E17.CNhs11006.1035-18D55.44
stomach, embryo E18.CNhs10999.1286-20C62.84
stomach, neonate N03.CNhs11193.1340-24B83.37
stomach, neonate N07.CNhs11210.718-18A94.79
stomach, neonate N25.CNhs11104.1355-25E43.66
stomach, neonate N30.CNhs11134.1386-42I13.24
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G540.02
testis, embryo E13.CNhs11031.389-23F54.78
testis, embryo E15.CNhs11034.443-27C56.95
testis, embryo E16.CNhs11033.470-26G54.67
testis, embryo E17.CNhs11029.486-18I54.52
testis, embryo E18.CNhs11027.503-18G55.91
testis, neonate N00.CNhs11189.1300-22B77.98
testis, neonate N07.CNhs11222.726-26I46.90
testis, neonate N10.CNhs11204.763-44D95.24
testis, neonate N20.CNhs11110.839-18H316.67
testis, neonate N30.CNhs11130.1391-42E223.33
thymus, adult.CNhs10471.38-12B56.95
thymus, embryo E14.CNhs11041.402-44I43.24
thymus, embryo E15.CNhs11005.430-45I23.49
thymus, embryo E16.CNhs11002.456-26C54.16
thymus, embryo E17.CNhs10581.478-18C14.65
thymus, embryo E18.CNhs10595.1273-19G44.97
thymus, neonate N02.CNhs11181.1541-43F84.81
thymus, neonate N03.CNhs11137.2104-43C76.79
thymus, neonate N06.CNhs11197.681-26C44.34
thymus, neonate N07.CNhs11211.713-19D36.25
thymus, neonate N10.CNhs11194.748-24E45.04
thymus, neonate N20.CNhs11186.820-7A24.39
thymus, neonate N25.CNhs11125.1362-25G75.10
thymus, neonate N30.CNhs11132.1393-42G26.19
tongue, adult.CNhs10499.32-1B42.72
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.99
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.59
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.20
urinary bladder, adult.CNhs10481.879-12E45.80
uterus, adult pregnant day19.CNhs10497.590-15F53.75
uterus, adult.CNhs10509.92-27E54.03
vagina, adult.CNhs10502.89-27D54.29
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.22
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I88.61
whole body, embryo E12.CNhs10587.857-27C96.78
whole body, embryo E13.CNhs10512.372-23H25.46
whole body, embryo E14.5.CNhs10578.420-27D24.38
whole body, embryo E14.CNhs10519.395-14B111.11
whole body, embryo E16.CNhs10514.453-14F28.27
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.07
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.55
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.71
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.39
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.55
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.62
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.52
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.41
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I56.25
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C24.94
whole body, neonate N01.CNhs10576.659-23C66.89
whole body, neonate N06.CNhs10515.692-21D13.97
whole body, neonate N10.CNhs10518.761-6B46.03





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system6.87e-1275
central nervous system2.40e-1173
ectoderm-derived structure8.68e-1195
ectoderm8.68e-1195
presumptive ectoderm8.68e-1195
neurectoderm4.16e-0964
neural plate4.16e-0964
presumptive neural plate4.16e-0964
regional part of nervous system6.37e-0954
neural tube4.06e-0852
neural rod4.06e-0852
future spinal cord4.06e-0852
neural keel4.06e-0852
ecto-epithelium4.93e-0873
gray matter3.86e-0734







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