FFCP PHASE1:Mm9::chr18:4352942..4352960,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=26410|HGNC=|MCL_coexpression_id=712|UniProt=Q07174,G3UWY2,Q3UEB8,Q3T9M0|association_with_transcript=0bp_to_ENSMUST00000025078,ENSMUST00000173930,NM_007746,uc008dye.1,uc008dyf.1,uc012ayx.1_5end|description=CAGE_peak_1_at_Map3k8_5end|id=chr18:4352942..4352960,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000219,5.24e-07,54;CL:0000988,8.61e-07,32;CL:0002032,8.61e-07,32;CL:0000037,8.61e-07,32;CL:0000837,8.61e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!4.50e-09!88;UBERON:0002204!4.82e-09!32;UBERON:0000926!1.15e-07!193;UBERON:0004120!1.15e-07!193;UBERON:0006603!1.15e-07!193;UBERON:0002371!7.44e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.86e-09,32;UBERON:0003081,5.03e-09,87;UBERON:0002371,6.53e-07,16|phase1_expression=0.640595388419176,1.74487703819681,0,0,0,0.671517087647559,0.934450562382103,14.0744422551318,65.3259670783734,57.1117444225664,4.62288514208863,1.43589886191606,3.76641605848653,1.22388563386596,10.9926221399169,6.07425802169478,2.09868563438444,26.9720151381293,29.6167176588396,27.1609377150739,3.14660173558958,34.2553781643054,28.9931765944218,2.3998863419011,1.60586496747019,0.57423196411502,1.29228598847722,0.861884930743556,0.190023419456374,1.26015064879965,0.665191531965914,0,0,0,1.44425809875637,1.82858109894342,1.22501613757421,28.0416192593728,32.0347491254758,36.1231383341921,28.8233429135197,42.3488200674236,27.1885797697446,6.92432498865675,7.80602370390262,5.68994931701213,3.9119567217402,6.75877984779384,8.34807494390993,13.026803237977,3.77963338388479,2.87505128729943,31.7109125449122,6.5282592781021,5.71359458542189,6.17422646486273,15.1862723167541,12.3761302146586,0.606949382578793,0,0.633831403506179,3.04960078862219,8.89294796111139,10.7987966073768,14.8329954385046,12.7886420690298,4.79360176829448,3.84218305321555,0.414758449233911,0.270011876663381,0.210324961351382,0.285650984403804,0.662605622854841,0.244981598429908,0.0958454710182364,0,3.30347642998166,1.14918604276669,1.22885226604995,0.395658863190582,0.0914876436024097,0,0.558365998002762,3.37657566019008,0.916789486660861,1.17851434189467,0.569486723196412,0.559198337475902,1.06016670666458,1.73814588245607,30.4357713136762,3.44169550792555,4.75979933595425,1.07940638327563,1.94932925234301,0.896053774194671,1.54488862144927,0.681721290312231,1.03914401841148,0,0.281686839553361,0,0,0,1.94841936910093,2.28023878927589,3.53867111510348,2.2836775943812,48.9392600093155,4.00793775475027,0.693941307064543,0.608930956624282,0.922461989024234,2.11011696773672,2.93971767839262,1.50799909595611,13.5957232253906,6.79616977523585,7.07688441559899,2.58826959915855,4.19598885074748,1.93950101254089,3.72783522436244,1.75668478206928,3.77004072264219,1.27728527604296,6.82946209683746,7.19883277192089,6.35351135365323,2.24685959107234,1.83000241127451,0.125654352112864,1.73824320192276,0.767146371990992,1.0389402227978,1.46017136760982,1.73126918545538,6.46916247172484,3.0326731012041,4.8401626853889,0.390361328888111,0.459804208866946,0.720248519221397,1.50704817835715,1.83698547708585,0.640568601424249,0.374806898238915,3.10444044886819,0.215567992932842,1.13463648100692,1.05570674498369,1.97276159184817,1.94633074457919,8.358051996532,11.5237996388448,0.199034266818493,6.31991868581911,3.3455227924913,4.26245249093389,4.97101854085205,2.34526059981096,3.24111710629827,4.26140524053378,2.36117078096885,3.08534225774756,2.32533944750408,2.68273401399619,2.21854150497622,2.13927804887525,2.29834449710733,2.26992666728396,4.38599962275997,2.85415149878366,3.22095405024892,1.05144974282064,0.92614151141356,1.98251269790279,0.793351699990633,1.49301775374664,0.696710015581316,1.15980715189884,3.63030344322017,6.67134131534611,4.94586627892654,1.89811624617805,3.95277491337626,2.76468729680296,5.96869416123452,6.04388670069272,1.79763881730844,1.72910439899755,1.99141273254367,0.948339504765408,0.571242563048644,3.38123207019241,1.01825663922657,1.55161989734101,2.03393877681924,1.58091342810643,2.65698266363284,2.66897837330337,2.46794327843601,5.03969466048153,0.166845105716094,0,0.674586337154561,1.01430060694251,2.894125917029,2.03700681425136,2.87696137450811,2.59416362840057,2.19649130550465,4.31304619582064,5.20997326735905,4.05648975048929,3.53610429125956,2.51156378930677,4.3419916922703,12.9327233116623,1.13694847062291,0.814824882210129,1.01847051465113,0.704070744865506,4.35516269348721,6.42717830392237,5.46374214001837,5.99013547603526,5.53661724121937,5.42146213435456,11.7981586595331,8.63424909329478,10.9933284521949,39.2057338242108,48.4076058598651,4.42587845717133,3.58717770196152,1.60550589987792,2.10981035865966,1.3114795630134,3.53459298086122,0.315508219416257,0.780877488593277,1.07711698866399,0.955875191810208,1.11399337041197,0.283076530788832,1.21443210502468,1.46127928955656,2.37172666767914,1.28528526568723,4.11626247103979,0.890328018336276,1.62886959353576,4.94910368917606,2.65490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| ||
|EntrezGene=26410 | |||
|HGNC= | |||
|MCL_coexpression_id=712 | |||
|UniProt=Q07174,G3UWY2,Q3UEB8,Q3T9M0 | |||
|association_with_transcript=0bp_to_ENSMUST00000025078,ENSMUST00000173930,NM_007746,uc008dye.1,uc008dyf.1,uc012ayx.1_5end | |||
|description=CAGE_peak_1_at_Map3k8_5end | |||
|id=chr18:4352942..4352960,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,5.24e-07,54;CL:0000988,8.61e-07,32;CL:0002032,8.61e-07,32;CL:0000037,8.61e-07,32;CL:0000837,8.61e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!4.50e-09!88;UBERON:0002204!4.82e-09!32;UBERON:0000926!1.15e-07!193;UBERON:0004120!1.15e-07!193;UBERON:0006603!1.15e-07!193;UBERON:0002371!7.44e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.86e-09,32;UBERON:0003081,5.03e-09,87;UBERON:0002371,6.53e-07,16 | |||
|phase1_expression=0.640595388419176,1.74487703819681,0,0,0,0.671517087647559,0.934450562382103,14.0744422551318,65.3259670783734,57.1117444225664,4.62288514208863,1.43589886191606,3.76641605848653,1.22388563386596,10.9926221399169,6.07425802169478,2.09868563438444,26.9720151381293,29.6167176588396,27.1609377150739,3.14660173558958,34.2553781643054,28.9931765944218,2.3998863419011,1.60586496747019,0.57423196411502,1.29228598847722,0.861884930743556,0.190023419456374,1.26015064879965,0.665191531965914,0,0,0,1.44425809875637,1.82858109894342,1.22501613757421,28.0416192593728,32.0347491254758,36.1231383341921,28.8233429135197,42.3488200674236,27.1885797697446,6.92432498865675,7.80602370390262,5.68994931701213,3.9119567217402,6.75877984779384,8.34807494390993,13.026803237977,3.77963338388479,2.87505128729943,31.7109125449122,6.5282592781021,5.71359458542189,6.17422646486273,15.1862723167541,12.3761302146586,0.606949382578793,0,0.633831403506179,3.04960078862219,8.89294796111139,10.7987966073768,14.8329954385046,12.7886420690298,4.79360176829448,3.84218305321555,0.414758449233911,0.270011876663381,0.210324961351382,0.285650984403804,0.662605622854841,0.244981598429908,0.0958454710182364,0,3.30347642998166,1.14918604276669,1.22885226604995,0.395658863190582,0.0914876436024097,0,0.558365998002762,3.37657566019008,0.916789486660861,1.17851434189467,0.569486723196412,0.559198337475902,1.06016670666458,1.73814588245607,30.4357713136762,3.44169550792555,4.75979933595425,1.07940638327563,1.94932925234301,0.896053774194671,1.54488862144927,0.681721290312231,1.03914401841148,0,0.281686839553361,0,0,0,1.94841936910093,2.28023878927589,3.53867111510348,2.2836775943812,48.9392600093155,4.00793775475027,0.693941307064543,0.608930956624282,0.922461989024234,2.11011696773672,2.93971767839262,1.50799909595611,13.5957232253906,6.79616977523585,7.07688441559899,2.58826959915855,4.19598885074748,1.93950101254089,3.72783522436244,1.75668478206928,3.77004072264219,1.27728527604296,6.82946209683746,7.19883277192089,6.35351135365323,2.24685959107234,1.83000241127451,0.125654352112864,1.73824320192276,0.767146371990992,1.0389402227978,1.46017136760982,1.73126918545538,6.46916247172484,3.0326731012041,4.8401626853889,0.390361328888111,0.459804208866946,0.720248519221397,1.50704817835715,1.83698547708585,0.640568601424249,0.374806898238915,3.10444044886819,0.215567992932842,1.13463648100692,1.05570674498369,1.97276159184817,1.94633074457919,8.358051996532,11.5237996388448,0.199034266818493,6.31991868581911,3.3455227924913,4.26245249093389,4.97101854085205,2.34526059981096,3.24111710629827,4.26140524053378,2.36117078096885,3.08534225774756,2.32533944750408,2.68273401399619,2.21854150497622,2.13927804887525,2.29834449710733,2.26992666728396,4.38599962275997,2.85415149878366,3.22095405024892,1.05144974282064,0.92614151141356,1.98251269790279,0.793351699990633,1.49301775374664,0.696710015581316,1.15980715189884,3.63030344322017,6.67134131534611,4.94586627892654,1.89811624617805,3.95277491337626,2.76468729680296,5.96869416123452,6.04388670069272,1.79763881730844,1.72910439899755,1.99141273254367,0.948339504765408,0.571242563048644,3.38123207019241,1.01825663922657,1.55161989734101,2.03393877681924,1.58091342810643,2.65698266363284,2.66897837330337,2.46794327843601,5.03969466048153,0.166845105716094,0,0.674586337154561,1.01430060694251,2.894125917029,2.03700681425136,2.87696137450811,2.59416362840057,2.19649130550465,4.31304619582064,5.20997326735905,4.05648975048929,3.53610429125956,2.51156378930677,4.3419916922703,12.9327233116623,1.13694847062291,0.814824882210129,1.01847051465113,0.704070744865506,4.35516269348721,6.42717830392237,5.46374214001837,5.99013547603526,5.53661724121937,5.42146213435456,11.7981586595331,8.63424909329478,10.9933284521949,39.2057338242108,48.4076058598651,4.42587845717133,3.58717770196152,1.60550589987792,2.10981035865966,1.3114795630134,3.53459298086122,0.315508219416257,0.780877488593277,1.07711698866399,0.955875191810208,1.11399337041197,0.283076530788832,1.21443210502468,1.46127928955656,2.37172666767914,1.28528526568723,4.11626247103979,0.890328018336276,1.62886959353576,4.94910368917606,2.65490276679926,0.971122544619926,0.302323556964751,1.13163047853539,1.47650946440386,2.76691633149535,2.58428293168221,3.99887102425256,2.49548164869305,3.16036757935816,4.21674434299995,3.09406629744561,1.36175842301515,0.36012218806262,0.776152102696527,1.28602221018955,1.41872186913819,1.42695054081656,1.64549020602121,0.608929898229199,12.6722722354404,5.93129798418696,2.20528398054962,12.2015827176695,13.724476269152,9.52944213864862,13.130957840345,11.8181447816444,2.91480836629851,0.741701208042039,11.4483490134561,3.714963623338,4.07427960213366,4.89757988212197,8.88512480186664,10.7525741407066,11.2185763795945,12.7355821614529,10.5031980091362,1.90934123603023,1.10717597753397,3.25311147402958,2.70013352054503,5.64538399239065,5.24070152990826,4.18079473792944,7.27350410382956,8.37619014348895,2.07383957266869,13.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| |||
|short_description=p1@Map3k8 | |||
}} | |||
Revision as of 16:13, 13 September 2013
| Short description: | p1@Map3k8 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Map3k8_5end |
| Coexpression cluster: | MCL_coexpression_mm9:712 |
| Association with transcript: | 0bp_to_ENSMUST00000025078, ENSMUST00000173930, NM_007746, uc008dye.1, uc008dyf.1, uc012ayx.1_5end |
| EntrezGene: | Map3k8 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| motile cell | 5.24e-07 | 54 |
| hematopoietic cell | 8.61e-07 | 32 |
| hematopoietic oligopotent progenitor cell | 8.61e-07 | 32 |
| hematopoietic stem cell | 8.61e-07 | 32 |
| hematopoietic multipotent progenitor cell | 8.61e-07 | 32 |
| Ontology term | p-value | n |
|---|---|---|
| musculoskeletal system | 3.86e-09 | 32 |
| lateral plate mesoderm | 5.03e-09 | 87 |
| bone marrow | 6.53e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
