FFCP PHASE1:Mm9::chr18:79108960..79108962,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=52|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:79108960..79108962,-|id=chr18:79108960..79108962,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,6.91e-15,3;CL:0000359,6.91e-15,3;CL:0002539,6.91e-15,3;CL:0000514,6.91e-15,3;CL:0000680,1.12e-07,6;CL:0000187,1.12e-07,6;CL:0000056,1.12e-07,6;CL:0002293,3.46e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,6.91e-15,3;UBERON:0004237,6.91e-15,3;UBERON:0004695,6.91e-15,3;UBERON:0002111,6.91e-15,3;UBERON:0004178,6.91e-15,3;UBERON:0000947,2.72e-11,4;UBERON:0001637,2.72e-11,4;UBERON:0004573,2.72e-11,4;UBERON:0003509,2.72e-11,4;UBERON:0004571,2.72e-11,4;UBERON:0010191,2.72e-11,4;UBERON:0004572,2.72e-11,4;UBERON:0000055,3.98e-09,5;UBERON:0007500,3.98e-09,5;UBERON:0001981,3.98e-09,5;UBERON:0002049,3.98e-09,5;UBERON:0007798,3.98e-09,5;UBERON:0004537,3.98e-09,5;UBERON:0006965,3.98e-09,5;UBERON:0010313,8.40e-07,3;UBERON:0002342,8.40e-07,3;UBERON:0002005,8.40e-07,3;UBERON:0005428,8.40e-07,3;UBERON:0005062,8.40e-07,3|phase1_expression=0.320297694209588,0,0.454999239389536,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0.404950534779652,0,0.315462165358238,0.137114433605739,0.42438965179803,1.19060606211498,0,0,0.159992422793407,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38486499773135,1.72340783073175,4.22157529971868,0,0,0,0,0,0,0.671130424230945,0,0,0,0.286533439938757,0,0,0.528990979272033,0,0,0,0,0,0,0,0,1.55534418462716,0.540023753326763,0.630974884054146,0,0,0.367472397644862,0.670918297127655,0.919218786610021,0,0.127687338085188,0.307213066512487,0.263772575460388,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0,0.569486723196412,0.559198337475902,0,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0.511290967734173,0.259786004602869,0.35333957451034,0.14084341977668,1.28326477414318,0,14.2213340630666,0,0,0,0.68510327831436,0.258937883647172,0.29688427812965,0,0,0,0.60289056221049,0.23517741427141,0.125666591329675,0.247194967734374,0.144599356919912,0,0.485300549842228,0.441683036920787,0,0,0.292780797011547,0.628340120440365,0.255457055208591,0,0,0,0.748953197024114,0.915001205637253,0.753926112677186,0,0.255715457330331,0,0.162241263067758,0.509196819251581,0.497627882440372,0,0.631325567659422,0.260240885925407,0,0.360124259610698,0.60281927134286,0.680364991513279,1.0249097622788,0.843315521037559,0.517406741478031,0.215567992932842,0.378212160335639,0.527853372491847,0.43839146485515,1.39023624612799,1.0447564995665,0.61734640922383,0.59710280045548,0,0,0,0.207125772535502,0,0.36012412292203,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0.804820204198858,0,0.16455984991348,0.656669856316381,0.648550476366846,1.16959989940266,0.658650345873152,0.134206418760372,0.420579897128254,0.102904612379284,0,0,0.426576501070468,0.232236671860439,0.515469845288373,0.403367049246685,0,0.380451252225118,0.474529061544512,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0,1.37098215131675,1.1270773567308,0.203651327845314,0.193952487167626,0.49095073923223,0.69560190836683,0.442830443938806,0.470996183524124,0.246794327843601,0,0,0.393117990226406,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0.757965647081939,0,0,0.938760993154008,0.167506257441816,0.238043640886014,0.195133647857799,0.315270288212382,0.44292937929755,0.797273843287435,0.163863314715738,0.345369963731791,0.578596234326046,0,0,0.491764273019036,0,0.160550589987792,0.117211686592203,0,0,1.26203287766503,1.17131623288992,0.861693590931196,0.238968797952552,0,0.283076530788832,0.809621403349789,0.584511715822624,0,0.642642632843614,0.141940085208269,0.178065603667255,0.488660878060728,0.989820737835213,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0,0.516856586336442,0,1.06949213515416,0.948110273807448,0,0,0,0.18006109403131,0.129358683782755,0.643011105094777,0.354680467284547,0.356737635204141,0.822745103010605,0.304464949114599,0,0.42366414172764,0,0.65954501176592,0.968786560175433,0.542816324353403,0.835606408021955,0.656563598980245,0.291480836629851,0.18542530201051,0,0.412773735926445,0,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0.954670618015114,0.158167996790568,0.406638934253697,0.86404272657441,0.627264888043406,0,0.539457385539283,0.578574190077352,0.26175594198403,0.648074866458964,0,0,0,0,0,0.516639293910924,0.337912250981556,0.938857909166032,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0.240390899039938,0.295379054349154,0,0,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0.549454872801795,0.643105137237198,0.501572104035363,1.12950368523413,0.460325236507177,0,0.859265911718438,0.685082519770642,0,0,0.45032120322422,0.453142408984205,0,0.103787347584177,0,1.70733605754134,0.243106717068294,0.209613162627982,0.367687016900028,0,0.412070114477788,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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=52 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:79108960..79108962,- | |||
|id=chr18:79108960..79108962,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,6.91e-15,3;CL:0000359,6.91e-15,3;CL:0002539,6.91e-15,3;CL:0000514,6.91e-15,3;CL:0000680,1.12e-07,6;CL:0000187,1.12e-07,6;CL:0000056,1.12e-07,6;CL:0002293,3.46e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,6.91e-15,3;UBERON:0004237,6.91e-15,3;UBERON:0004695,6.91e-15,3;UBERON:0002111,6.91e-15,3;UBERON:0004178,6.91e-15,3;UBERON:0000947,2.72e-11,4;UBERON:0001637,2.72e-11,4;UBERON:0004573,2.72e-11,4;UBERON:0003509,2.72e-11,4;UBERON:0004571,2.72e-11,4;UBERON:0010191,2.72e-11,4;UBERON:0004572,2.72e-11,4;UBERON:0000055,3.98e-09,5;UBERON:0007500,3.98e-09,5;UBERON:0001981,3.98e-09,5;UBERON:0002049,3.98e-09,5;UBERON:0007798,3.98e-09,5;UBERON:0004537,3.98e-09,5;UBERON:0006965,3.98e-09,5;UBERON:0010313,8.40e-07,3;UBERON:0002342,8.40e-07,3;UBERON:0002005,8.40e-07,3;UBERON:0005428,8.40e-07,3;UBERON:0005062,8.40e-07,3 | |||
|phase1_expression=0.320297694209588,0,0.454999239389536,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0.404950534779652,0,0.315462165358238,0.137114433605739,0.42438965179803,1.19060606211498,0,0,0.159992422793407,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38486499773135,1.72340783073175,4.22157529971868,0,0,0,0,0,0,0.671130424230945,0,0,0,0.286533439938757,0,0,0.528990979272033,0,0,0,0,0,0,0,0,1.55534418462716,0.540023753326763,0.630974884054146,0,0,0.367472397644862,0.670918297127655,0.919218786610021,0,0.127687338085188,0.307213066512487,0.263772575460388,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0,0.569486723196412,0.559198337475902,0,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0.511290967734173,0.259786004602869,0.35333957451034,0.14084341977668,1.28326477414318,0,14.2213340630666,0,0,0,0.68510327831436,0.258937883647172,0.29688427812965,0,0,0,0.60289056221049,0.23517741427141,0.125666591329675,0.247194967734374,0.144599356919912,0,0.485300549842228,0.441683036920787,0,0,0.292780797011547,0.628340120440365,0.255457055208591,0,0,0,0.748953197024114,0.915001205637253,0.753926112677186,0,0.255715457330331,0,0.162241263067758,0.509196819251581,0.497627882440372,0,0.631325567659422,0.260240885925407,0,0.360124259610698,0.60281927134286,0.680364991513279,1.0249097622788,0.843315521037559,0.517406741478031,0.215567992932842,0.378212160335639,0.527853372491847,0.43839146485515,1.39023624612799,1.0447564995665,0.61734640922383,0.59710280045548,0,0,0,0.207125772535502,0,0.36012412292203,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0.804820204198858,0,0.16455984991348,0.656669856316381,0.648550476366846,1.16959989940266,0.658650345873152,0.134206418760372,0.420579897128254,0.102904612379284,0,0,0.426576501070468,0.232236671860439,0.515469845288373,0.403367049246685,0,0.380451252225118,0.474529061544512,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0,1.37098215131675,1.1270773567308,0.203651327845314,0.193952487167626,0.49095073923223,0.69560190836683,0.442830443938806,0.470996183524124,0.246794327843601,0,0,0.393117990226406,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0.757965647081939,0,0,0.938760993154008,0.167506257441816,0.238043640886014,0.195133647857799,0.315270288212382,0.44292937929755,0.797273843287435,0.163863314715738,0.345369963731791,0.578596234326046,0,0,0.491764273019036,0,0.160550589987792,0.117211686592203,0,0,1.26203287766503,1.17131623288992,0.861693590931196,0.238968797952552,0,0.283076530788832,0.809621403349789,0.584511715822624,0,0.642642632843614,0.141940085208269,0.178065603667255,0.488660878060728,0.989820737835213,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0,0.516856586336442,0,1.06949213515416,0.948110273807448,0,0,0,0.18006109403131,0.129358683782755,0.643011105094777,0.354680467284547,0.356737635204141,0.822745103010605,0.304464949114599,0,0.42366414172764,0,0.65954501176592,0.968786560175433,0.542816324353403,0.835606408021955,0.656563598980245,0.291480836629851,0.18542530201051,0,0.412773735926445,0,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0.954670618015114,0.158167996790568,0.406638934253697,0.86404272657441,0.627264888043406,0,0.539457385539283,0.578574190077352,0.26175594198403,0.648074866458964,0,0,0,0,0,0.516639293910924,0.337912250981556,0.938857909166032,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0.240390899039938,0.295379054349154,0,0,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0.549454872801795,0.643105137237198,0.501572104035363,1.12950368523413,0.460325236507177,0,0.859265911718438,0.685082519770642,0,0,0.45032120322422,0.453142408984205,0,0.103787347584177,0,1.70733605754134,0.243106717068294,0.209613162627982,0.367687016900028,0,0.412070114477788,0.64183841918363,0.505394423527595,0,0.188626341386076,0.37456602987953,0.512201219238954,0.574354689556133,1.42888107384922,0.811190281613988,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0.887379030796687,0.953744759789284,0.581385666529314,0.752875043322645,0.761531471025089,0.548783918618318,0.526139422875686,1.08643291076689,0.561142271657738,0.474540072496697,0.591026894253381,0.409231043169689,0.619747364743864,0.385813221962283,0.249810577937946,0,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr18:79108960..79108962,- | |||
}} |
Revision as of 16:48, 13 September 2013
Short description: | p@chr18:79108960..79108962, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:79108960..79108962, - |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 6.91e-15 | 3 |
vascular associated smooth muscle cell | 6.91e-15 | 3 |
aortic smooth muscle cell | 6.91e-15 | 3 |
smooth muscle myoblast | 6.91e-15 | 3 |
muscle precursor cell | 1.12e-07 | 6 |
muscle cell | 1.12e-07 | 6 |
myoblast | 1.12e-07 | 6 |
epithelial cell of thymus | 3.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 6.91e-15 | 3 |
blood vessel smooth muscle | 6.91e-15 | 3 |
arterial system smooth muscle | 6.91e-15 | 3 |
artery smooth muscle tissue | 6.91e-15 | 3 |
aorta smooth muscle tissue | 6.91e-15 | 3 |
aorta | 2.72e-11 | 4 |
artery | 2.72e-11 | 4 |
systemic artery | 2.72e-11 | 4 |
arterial blood vessel | 2.72e-11 | 4 |
systemic arterial system | 2.72e-11 | 4 |
aortic system | 2.72e-11 | 4 |
arterial system | 2.72e-11 | 4 |
vessel | 3.98e-09 | 5 |
epithelial tube open at both ends | 3.98e-09 | 5 |
blood vessel | 3.98e-09 | 5 |
vasculature | 3.98e-09 | 5 |
vascular system | 3.98e-09 | 5 |
blood vasculature | 3.98e-09 | 5 |
vascular cord | 3.98e-09 | 5 |
neural crest-derived structure | 8.40e-07 | 3 |
neural crest | 8.40e-07 | 3 |
enteric nervous system | 8.40e-07 | 3 |
vagal neural crest | 8.40e-07 | 3 |
neural fold | 8.40e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.