FFCP PHASE1:Hg19::chr6:124737040..124737043,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C10|description=CAGE_peak_at_chr6:124737040..124737043,+|id=chr6:124737040..124737043,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000167;1.10e-13;1!CL:0000164;1.10e-13;1!CL:0000502;1.10e-13;1!CL:0000172;1.10e-13;1!CL:0000173;1.10e-13;1|ontology_enrichment_celltype_v019_2=CL:0000167,9.73e-14,1;CL:0000164,9.73e-14,1;CL:0000502,9.73e-14,1;CL:0000172,9.73e-14,1;CL:0000173,9.73e-14,1;CL:0002351,9.73e-14,1|ontology_enrichment_development_v019=UBERON:0006215;2.11e-17;3!CL:0002351;1.10e-13;1!UBERON:0006222;1.10e-13;1|ontology_enrichment_disease=DOID:171!2.49e-08!10|ontology_enrichment_disease_v019=DOID:4960;1.10e-13;1!DOID:0070004;1.10e-13;1!DOID:4430;1.10e-13;1|ontology_enrichment_disease_v019_2=DOID:4430,9.73e-14,1;DOID:4960,2.07e-13,1;DOID:0070004,2.07e-13,1|ontology_enrichment_uberon=UBERON:0001049!1.66e-58!57;UBERON:0005068!1.66e-58!57;UBERON:0006241!1.66e-58!57;UBERON:0007135!1.66e-58!57;UBERON:0002616!7.29e-50!59;UBERON:0002346!1.01e-47!90;UBERON:0002780!1.33e-45!41;UBERON:0001890!1.33e-45!41;UBERON:0006240!1.33e-45!41;UBERON:0001893!6.99e-45!34;UBERON:0002020!1.33e-44!34;UBERON:0003528!1.33e-44!34;UBERON:0003080!2.51e-44!42;UBERON:0001017!2.68e-43!82;UBERON:0002791!9.33e-43!33;UBERON:0003075!3.32e-41!86;UBERON:0007284!3.32e-41!86;UBERON:0001869!9.22e-41!32;UBERON:0005743!9.31e-41!86;UBERON:0000955!2.27e-40!69;UBERON:0006238!2.27e-40!69;UBERON:0000073!7.62e-38!94;UBERON:0001016!7.62e-38!94;UBERON:0002619!6.83e-35!22;UBERON:0001950!3.01e-30!20;UBERON:0000956!3.26e-30!25;UBERON:0000203!3.26e-30!25;UBERON:0003056!6.39e-30!61;UBERON:0007023!4.59e-26!115;UBERON:0000924!6.70e-23!173;UBERON:0006601!6.70e-23!173;UBERON:0000033!5.71e-22!123;UBERON:0000153!9.30e-22!129;UBERON:0007811!9.30e-22!129;UBERON:0004121!4.69e-19!169;UBERON:0000025!2.73e-17!194;UBERON:0002420!2.45e-16!9;UBERON:0007245!2.45e-16!9;UBERON:0010009!2.45e-16!9;UBERON:0010011!2.45e-16!9;UBERON:0000454!2.45e-16!9;UBERON:0002308!6.23e-16!9;UBERON:0000125!6.23e-16!9;UBERON:0003076!9.60e-15!15;UBERON:0003057!9.60e-15!15;UBERON:0001871!5.71e-14!7;UBERON:0000200!7.82e-14!6;UBERON:0000349!5.04e-13!5;UBERON:0001872!1.96e-12!5;UBERON:0004111!3.29e-12!241;UBERON:0009663!5.81e-12!7;UBERON:0004733!6.07e-12!12;UBERON:0002028!6.07e-12!12;UBERON:0007277!6.07e-12!12;UBERON:0004732!6.61e-11!13;UBERON:0000477!7.12e-11!286;UBERON:0002298!4.73e-10!8;UBERON:0002680!1.05e-09!9;UBERON:0001895!1.05e-09!9;UBERON:0010092!1.05e-09!9;UBERON:0000483!1.29e-09!309;UBERON:0000119!2.13e-09!312;UBERON:0000064!2.40e-08!219;UBERON:0000988!7.47e-08!3;UBERON:0006331!9.03e-08!3;UBERON:0002771!1.99e-07!3|ontology_enrichment_uberon_v019=UBERON:0001954;6.34e-26;2!UBERON:0003022;6.34e-26;2!UBERON:0002421;6.34e-26;2!UBERON:0002600;6.34e-26;2!UBERON:0002619;2.19e-19;22!UBERON:0000956;4.04e-17;25!UBERON:0000203;4.04e-17;25!UBERON:0002791;4.84e-16;32!UBERON:0001869;5.88e-16;32!UBERON:0002780;9.67e-16;41!UBERON:0001890;9.67e-16;41!UBERON:0003528;6.29e-15;34!UBERON:0002020;6.29e-15;34!UBERON:0000073;7.21e-13;53!UBERON:0002616;7.21e-13;53!UBERON:0001893;2.52e-12;34!UBERON:0002021;4.78e-11;5!UBERON:0000349;5.70e-11;5!UBERON:0001950;6.58e-10;20!UBERON:0002037;3.56e-09;6!UBERON:0001017;1.33e-07;75!UBERON:0001016;1.61e-07;83!UBERON:0001875;1.75e-07;2!UBERON:0006514;1.75e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001954,8.70e-26,2;UBERON:0003022,8.70e-26,2;UBERON:0002421,8.70e-26,2;UBERON:0002600,8.70e-26,2;UBERON:0000073,5.41e-22,53;UBERON:0002616,5.41e-22,53;UBERON:0001049,8.90e-21,56;UBERON:0005068,8.90e-21,56;UBERON:0006241,8.90e-21,56;UBERON:0007135,8.90e-21,56;UBERON:0002619,2.19e-19,22;UBERON:0002780,2.34e-18,41;UBERON:0001890,2.34e-18,41;UBERON:0003080,2.34e-18,41;UBERON:0006240,2.34e-18,41;UBERON:0002791,4.09e-18,32;UBERON:0001869,4.09e-18,32;UBERON:0000956,4.04e-17,25;UBERON:0000203,4.04e-17,25;UBERON:0003528,4.75e-17,34;UBERON:0002020,4.75e-17,34;UBERON:0001893,4.75e-17,34;UBERON:0000955,1.05e-16,68;UBERON:0006238,1.05e-16,68;UBERON:0002346,5.10e-16,86;UBERON:0001017,6.63e-14,81;UBERON:0003075,6.63e-14,82;UBERON:0007284,6.63e-14,82;UBERON:0001016,1.99e-12,89;UBERON:0003056,3.50e-12,61;UBERON:0002021,4.12e-11,5;UBERON:0000349,6.47e-11,5;UBERON:0010371,9.78e-11,104;UBERON:0001950,6.21e-10,20;UBERON:0002037,3.28e-09,6;UBERON:0006215,3.28e-09,6;UBERON:0010314,3.28e-08,132;UBERON:0001875,1.28e-07,2;UBERON:0006514,1.28e-07,2;UBERON:0004121,2.66e-07,171;UBERON:0000924,2.66e-07,171;UBERON:0006601,2.66e-07,171|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535081656179426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.09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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_at_chr6:124737040..124737043,+ | |||
|id=chr6:124737040..124737043,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.10e-13;1!CL:0000164;1.10e-13;1!CL:0000502;1.10e-13;1!CL:0000172;1.10e-13;1!CL:0000173;1.10e-13;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,9.73e-14,1;CL:0000164,9.73e-14,1;CL:0000502,9.73e-14,1;CL:0000172,9.73e-14,1;CL:0000173,9.73e-14,1;CL:0002351,9.73e-14,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.11e-17;3!CL:0002351;1.10e-13;1!UBERON:0006222;1.10e-13;1 | |||
|ontology_enrichment_disease=DOID:171!2.49e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:4960;1.10e-13;1!DOID:0070004;1.10e-13;1!DOID:4430;1.10e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,9.73e-14,1;DOID:4960,2.07e-13,1;DOID:0070004,2.07e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.66e-58!57;UBERON:0005068!1.66e-58!57;UBERON:0006241!1.66e-58!57;UBERON:0007135!1.66e-58!57;UBERON:0002616!7.29e-50!59;UBERON:0002346!1.01e-47!90;UBERON:0002780!1.33e-45!41;UBERON:0001890!1.33e-45!41;UBERON:0006240!1.33e-45!41;UBERON:0001893!6.99e-45!34;UBERON:0002020!1.33e-44!34;UBERON:0003528!1.33e-44!34;UBERON:0003080!2.51e-44!42;UBERON:0001017!2.68e-43!82;UBERON:0002791!9.33e-43!33;UBERON:0003075!3.32e-41!86;UBERON:0007284!3.32e-41!86;UBERON:0001869!9.22e-41!32;UBERON:0005743!9.31e-41!86;UBERON:0000955!2.27e-40!69;UBERON:0006238!2.27e-40!69;UBERON:0000073!7.62e-38!94;UBERON:0001016!7.62e-38!94;UBERON:0002619!6.83e-35!22;UBERON:0001950!3.01e-30!20;UBERON:0000956!3.26e-30!25;UBERON:0000203!3.26e-30!25;UBERON:0003056!6.39e-30!61;UBERON:0007023!4.59e-26!115;UBERON:0000924!6.70e-23!173;UBERON:0006601!6.70e-23!173;UBERON:0000033!5.71e-22!123;UBERON:0000153!9.30e-22!129;UBERON:0007811!9.30e-22!129;UBERON:0004121!4.69e-19!169;UBERON:0000025!2.73e-17!194;UBERON:0002420!2.45e-16!9;UBERON:0007245!2.45e-16!9;UBERON:0010009!2.45e-16!9;UBERON:0010011!2.45e-16!9;UBERON:0000454!2.45e-16!9;UBERON:0002308!6.23e-16!9;UBERON:0000125!6.23e-16!9;UBERON:0003076!9.60e-15!15;UBERON:0003057!9.60e-15!15;UBERON:0001871!5.71e-14!7;UBERON:0000200!7.82e-14!6;UBERON:0000349!5.04e-13!5;UBERON:0001872!1.96e-12!5;UBERON:0004111!3.29e-12!241;UBERON:0009663!5.81e-12!7;UBERON:0004733!6.07e-12!12;UBERON:0002028!6.07e-12!12;UBERON:0007277!6.07e-12!12;UBERON:0004732!6.61e-11!13;UBERON:0000477!7.12e-11!286;UBERON:0002298!4.73e-10!8;UBERON:0002680!1.05e-09!9;UBERON:0001895!1.05e-09!9;UBERON:0010092!1.05e-09!9;UBERON:0000483!1.29e-09!309;UBERON:0000119!2.13e-09!312;UBERON:0000064!2.40e-08!219;UBERON:0000988!7.47e-08!3;UBERON:0006331!9.03e-08!3;UBERON:0002771!1.99e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001954;6.34e-26;2!UBERON:0003022;6.34e-26;2!UBERON:0002421;6.34e-26;2!UBERON:0002600;6.34e-26;2!UBERON:0002619;2.19e-19;22!UBERON:0000956;4.04e-17;25!UBERON:0000203;4.04e-17;25!UBERON:0002791;4.84e-16;32!UBERON:0001869;5.88e-16;32!UBERON:0002780;9.67e-16;41!UBERON:0001890;9.67e-16;41!UBERON:0003528;6.29e-15;34!UBERON:0002020;6.29e-15;34!UBERON:0000073;7.21e-13;53!UBERON:0002616;7.21e-13;53!UBERON:0001893;2.52e-12;34!UBERON:0002021;4.78e-11;5!UBERON:0000349;5.70e-11;5!UBERON:0001950;6.58e-10;20!UBERON:0002037;3.56e-09;6!UBERON:0001017;1.33e-07;75!UBERON:0001016;1.61e-07;83!UBERON:0001875;1.75e-07;2!UBERON:0006514;1.75e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,8.70e-26,2;UBERON:0003022,8.70e-26,2;UBERON:0002421,8.70e-26,2;UBERON:0002600,8.70e-26,2;UBERON:0000073,5.41e-22,53;UBERON:0002616,5.41e-22,53;UBERON:0001049,8.90e-21,56;UBERON:0005068,8.90e-21,56;UBERON:0006241,8.90e-21,56;UBERON:0007135,8.90e-21,56;UBERON:0002619,2.19e-19,22;UBERON:0002780,2.34e-18,41;UBERON:0001890,2.34e-18,41;UBERON:0003080,2.34e-18,41;UBERON:0006240,2.34e-18,41;UBERON:0002791,4.09e-18,32;UBERON:0001869,4.09e-18,32;UBERON:0000956,4.04e-17,25;UBERON:0000203,4.04e-17,25;UBERON:0003528,4.75e-17,34;UBERON:0002020,4.75e-17,34;UBERON:0001893,4.75e-17,34;UBERON:0000955,1.05e-16,68;UBERON:0006238,1.05e-16,68;UBERON:0002346,5.10e-16,86;UBERON:0001017,6.63e-14,81;UBERON:0003075,6.63e-14,82;UBERON:0007284,6.63e-14,82;UBERON:0001016,1.99e-12,89;UBERON:0003056,3.50e-12,61;UBERON:0002021,4.12e-11,5;UBERON:0000349,6.47e-11,5;UBERON:0010371,9.78e-11,104;UBERON:0001950,6.21e-10,20;UBERON:0002037,3.28e-09,6;UBERON:0006215,3.28e-09,6;UBERON:0010314,3.28e-08,132;UBERON:0001875,1.28e-07,2;UBERON:0006514,1.28e-07,2;UBERON:0004121,2.66e-07,171;UBERON:0000924,2.66e-07,171;UBERON:0006601,2.66e-07,171 | |||
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|short_description=p@chr6:124737040..124737043,+ | |||
}} |
Revision as of 17:47, 13 September 2013
Short description: | p@chr6:124737040..124737043, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:124737040..124737043, + |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 9.73e-14 | 1 |
enteroendocrine cell | 9.73e-14 | 1 |
type D enteroendocrine cell | 9.73e-14 | 1 |
somatostatin secreting cell | 9.73e-14 | 1 |
pancreatic D cell | 9.73e-14 | 1 |
progenitor cell of endocrine pancreas | 9.73e-14 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 9.73e-14 | 1 |
bone marrow cancer | 2.07e-13 | 1 |
myeloma | 2.07e-13 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.