FFCP PHASE1:Mm9::chr19:46379032..46379054,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=318|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:46379032..46379054,-|id=chr19:46379032..46379054,-|ontology_enrichment_celltype=CL:0000063!7.34e-15!66;CL:0000988!3.11e-10!32;CL:0002032!3.11e-10!32;CL:0000037!3.11e-10!32;CL:0000566!3.11e-10!32;CL:0000837!3.11e-10!32;CL:0002320!2.68e-08!46;CL:0000134!2.68e-08!46;CL:0000838!3.96e-08!12;CL:0000084!1.25e-07!11;CL:0000827!1.25e-07!11;CL:0000219!1.33e-07!54;CL:0002031!1.77e-07!25;CL:0000542!2.38e-07!13;CL:0000051!2.38e-07!13;CL:0000791!2.86e-07!9;CL:0000789!2.86e-07!9;CL:0002420!2.86e-07!9;CL:0002419!2.86e-07!9;CL:0000790!2.86e-07!9;CL:0000738!9.72e-07!17;CL:0002087!9.72e-07!17|ontology_enrichment_celltype_v019_2=CL:0000988,2.09e-13,32;CL:0002032,2.09e-13,32;CL:0000037,2.09e-13,32;CL:0000837,2.09e-13,32;CL:0002320,8.87e-12,46;CL:0000134,8.87e-12,46;CL:0000838,2.25e-11,12;CL:0000791,2.50e-11,9;CL:0000789,2.50e-11,9;CL:0002420,2.50e-11,9;CL:0002419,2.50e-11,9;CL:0000790,2.50e-11,9;CL:0000084,1.59e-10,11;CL:0000827,1.59e-10,11;CL:0000219,1.99e-10,54;CL:0000624,2.37e-10,8;CL:0000542,3.23e-10,13;CL:0000051,3.23e-10,13;CL:0000066,3.34e-10,25;CL:0002076,1.00e-09,15;CL:0002563,1.07e-09,9;CL:0002251,1.07e-09,9;CL:0000738,3.30e-09,17;CL:0002087,3.30e-09,17;CL:0002031,6.02e-09,25;CL:0000034,9.92e-09,97;CL:0000893,4.25e-08,6;CL:0002489,4.25e-08,6;CL:0000898,4.25e-08,6;CL:0000809,4.25e-08,6;CL:0000810,4.25e-08,6;CL:0000895,4.25e-08,6;CL:0000808,4.25e-08,6;CL:0000894,4.25e-08,6;CL:0000806,4.25e-08,6;CL:0000807,4.25e-08,6;CL:0000805,4.25e-08,6;CL:0002425,4.25e-08,6;CL:0002436,4.25e-08,6;CL:0002427,4.25e-08,6;CL:0002428,4.25e-08,6;CL:0002429,4.25e-08,6;CL:0002433,4.25e-08,6;CL:0002431,4.25e-08,6;CL:0002432,4.25e-08,6;CL:0000223,8.52e-08,20;CL:0000723,1.28e-07,91;CL:0000048,1.28e-07,91;CL:0000239,1.84e-07,6;CL:0000677,1.84e-07,6;CL:0000584,1.84e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!8.52e-10!48;UBERON:0002390!1.54e-08!45;UBERON:0003061!1.54e-08!45;UBERON:0002384!2.68e-08!46;UBERON:0004923!3.09e-08!24;UBERON:0000344!3.41e-08!15;UBERON:0004119!1.17e-07!130;UBERON:0000925!1.17e-07!130;UBERON:0006595!1.17e-07!130;UBERON:0001007!1.29e-07!128;UBERON:0001555!1.29e-07!128;UBERON:0007026!1.29e-07!128;UBERON:0001242!2.86e-07!13;UBERON:0000060!2.86e-07!13;UBERON:0001262!2.86e-07!13;UBERON:0004786!2.86e-07!13;UBERON:0004921!5.51e-07!126;UBERON:0004185!5.51e-07!126;UBERON:0000485!8.68e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.87e-12,46;UBERON:0000344,1.73e-10,15;UBERON:0003350,1.07e-09,9;UBERON:0004808,1.07e-09,9;UBERON:0001277,1.07e-09,9;UBERON:0000485,3.96e-09,11;UBERON:0001242,6.01e-09,13;UBERON:0001262,6.01e-09,13;UBERON:0004786,6.01e-09,13;UBERON:0004923,5.29e-08,24;UBERON:0002193,1.63e-07,48;UBERON:0002405,1.63e-07,48;UBERON:0000490,2.65e-07,66|phase1_expression=1.92178616525753,17.7977457896074,15.0149748998547,7.86406949397758,7.01254021924886,14.2697381125106,15.1848216387092,42.8689433826033,61.1023054138234,72.325938633496,15.0671812038444,10.5299249873844,22.2560948910567,16.3476152523525,0.333109761815663,0.607425802169478,0.699561878128147,2.68142840554502,1.37114433605739,3.39511721438424,0.680346321208558,0.893618560807968,1.82839852397255,4.31979541542198,3.44113921600755,8.6134794617253,9.47676391549965,9.9116767035509,2.09025761402011,0.756090389279792,5.98672378769323,1.27006134691926,0.61506478758457,0,7.22129049378186,1.66234645358492,5.10423390655923,12.9744805528441,7.813353445238,5.23523743973798,69.9995470756907,17.7591826089196,5.34061388334269,3.14742044938943,1.82478476195126,2.56965453026354,1.56478268869608,0,0.219686182734472,0.58328969722285,0.419959264876088,0,6.54352163625172,17.4086914082723,12.4354705682712,1.02903774414379,0.573066879877513,0.515672092277442,0,0,0,1.0165335962074,0,0.899899717281399,2.96659908770092,4.2628806896766,1.19840044207362,0.768436610643109,0,0,0,0,0.441737081903227,0.122490799214954,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,1.81742863999642,0.68014404096107,39.4215704634282,0.860423876981386,0,0,0,0,0.561777680527007,0.852151612890289,1.55871602761721,0,0.985903938436763,1.28326477414318,0,0,1.29894624606728,2.53359865475099,1.51657333504435,0.11418387971906,4.14300613835475,0.29688427812965,0.346970653532272,0,0.461230994512117,0,0.117588707135705,0.376999773989026,3.21353458054686,0.289198713839823,0,0,0.662524555381181,0.484875253135222,0,0.292780797011547,0,1.02182822083437,14.7372603142282,35.394261128611,9.27612657633372,0,0,0,0,0.255715457330331,0,0.162241263067758,0.203678727700633,0.497627882440372,0,0.210441855886474,0.130120442962704,0.459804208866946,0.180062129805349,0.150704817835715,0.136072998302656,0,0.187403449119458,0.776110112217047,0.215567992932842,0,0.527853372491847,0.219195732427575,0.834141747676794,0,0,0.199034266818493,11.2354109970118,12.0953516343916,6.81992398549422,0.621377317606506,0.234526059981096,0.180062061461015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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=318 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:46379032..46379054,- | |||
|id=chr19:46379032..46379054,- | |||
|ontology_enrichment_celltype=CL:0000063!7.34e-15!66;CL:0000988!3.11e-10!32;CL:0002032!3.11e-10!32;CL:0000037!3.11e-10!32;CL:0000566!3.11e-10!32;CL:0000837!3.11e-10!32;CL:0002320!2.68e-08!46;CL:0000134!2.68e-08!46;CL:0000838!3.96e-08!12;CL:0000084!1.25e-07!11;CL:0000827!1.25e-07!11;CL:0000219!1.33e-07!54;CL:0002031!1.77e-07!25;CL:0000542!2.38e-07!13;CL:0000051!2.38e-07!13;CL:0000791!2.86e-07!9;CL:0000789!2.86e-07!9;CL:0002420!2.86e-07!9;CL:0002419!2.86e-07!9;CL:0000790!2.86e-07!9;CL:0000738!9.72e-07!17;CL:0002087!9.72e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.09e-13,32;CL:0002032,2.09e-13,32;CL:0000037,2.09e-13,32;CL:0000837,2.09e-13,32;CL:0002320,8.87e-12,46;CL:0000134,8.87e-12,46;CL:0000838,2.25e-11,12;CL:0000791,2.50e-11,9;CL:0000789,2.50e-11,9;CL:0002420,2.50e-11,9;CL:0002419,2.50e-11,9;CL:0000790,2.50e-11,9;CL:0000084,1.59e-10,11;CL:0000827,1.59e-10,11;CL:0000219,1.99e-10,54;CL:0000624,2.37e-10,8;CL:0000542,3.23e-10,13;CL:0000051,3.23e-10,13;CL:0000066,3.34e-10,25;CL:0002076,1.00e-09,15;CL:0002563,1.07e-09,9;CL:0002251,1.07e-09,9;CL:0000738,3.30e-09,17;CL:0002087,3.30e-09,17;CL:0002031,6.02e-09,25;CL:0000034,9.92e-09,97;CL:0000893,4.25e-08,6;CL:0002489,4.25e-08,6;CL:0000898,4.25e-08,6;CL:0000809,4.25e-08,6;CL:0000810,4.25e-08,6;CL:0000895,4.25e-08,6;CL:0000808,4.25e-08,6;CL:0000894,4.25e-08,6;CL:0000806,4.25e-08,6;CL:0000807,4.25e-08,6;CL:0000805,4.25e-08,6;CL:0002425,4.25e-08,6;CL:0002436,4.25e-08,6;CL:0002427,4.25e-08,6;CL:0002428,4.25e-08,6;CL:0002429,4.25e-08,6;CL:0002433,4.25e-08,6;CL:0002431,4.25e-08,6;CL:0002432,4.25e-08,6;CL:0000223,8.52e-08,20;CL:0000723,1.28e-07,91;CL:0000048,1.28e-07,91;CL:0000239,1.84e-07,6;CL:0000677,1.84e-07,6;CL:0000584,1.84e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.52e-10!48;UBERON:0002390!1.54e-08!45;UBERON:0003061!1.54e-08!45;UBERON:0002384!2.68e-08!46;UBERON:0004923!3.09e-08!24;UBERON:0000344!3.41e-08!15;UBERON:0004119!1.17e-07!130;UBERON:0000925!1.17e-07!130;UBERON:0006595!1.17e-07!130;UBERON:0001007!1.29e-07!128;UBERON:0001555!1.29e-07!128;UBERON:0007026!1.29e-07!128;UBERON:0001242!2.86e-07!13;UBERON:0000060!2.86e-07!13;UBERON:0001262!2.86e-07!13;UBERON:0004786!2.86e-07!13;UBERON:0004921!5.51e-07!126;UBERON:0004185!5.51e-07!126;UBERON:0000485!8.68e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.87e-12,46;UBERON:0000344,1.73e-10,15;UBERON:0003350,1.07e-09,9;UBERON:0004808,1.07e-09,9;UBERON:0001277,1.07e-09,9;UBERON:0000485,3.96e-09,11;UBERON:0001242,6.01e-09,13;UBERON:0001262,6.01e-09,13;UBERON:0004786,6.01e-09,13;UBERON:0004923,5.29e-08,24;UBERON:0002193,1.63e-07,48;UBERON:0002405,1.63e-07,48;UBERON:0000490,2.65e-07,66 | |||
|phase1_expression=1.92178616525753,17.7977457896074,15.0149748998547,7.86406949397758,7.01254021924886,14.2697381125106,15.1848216387092,42.8689433826033,61.1023054138234,72.325938633496,15.0671812038444,10.5299249873844,22.2560948910567,16.3476152523525,0.333109761815663,0.607425802169478,0.699561878128147,2.68142840554502,1.37114433605739,3.39511721438424,0.680346321208558,0.893618560807968,1.82839852397255,4.31979541542198,3.44113921600755,8.6134794617253,9.47676391549965,9.9116767035509,2.09025761402011,0.756090389279792,5.98672378769323,1.27006134691926,0.61506478758457,0,7.22129049378186,1.66234645358492,5.10423390655923,12.9744805528441,7.813353445238,5.23523743973798,69.9995470756907,17.7591826089196,5.34061388334269,3.14742044938943,1.82478476195126,2.56965453026354,1.56478268869608,0,0.219686182734472,0.58328969722285,0.419959264876088,0,6.54352163625172,17.4086914082723,12.4354705682712,1.02903774414379,0.573066879877513,0.515672092277442,0,0,0,1.0165335962074,0,0.899899717281399,2.96659908770092,4.2628806896766,1.19840044207362,0.768436610643109,0,0,0,0,0.441737081903227,0.122490799214954,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,1.81742863999642,0.68014404096107,39.4215704634282,0.860423876981386,0,0,0,0,0.561777680527007,0.852151612890289,1.55871602761721,0,0.985903938436763,1.28326477414318,0,0,1.29894624606728,2.53359865475099,1.51657333504435,0.11418387971906,4.14300613835475,0.29688427812965,0.346970653532272,0,0.461230994512117,0,0.117588707135705,0.376999773989026,3.21353458054686,0.289198713839823,0,0,0.662524555381181,0.484875253135222,0,0.292780797011547,0,1.02182822083437,14.7372603142282,35.394261128611,9.27612657633372,0,0,0,0,0.255715457330331,0,0.162241263067758,0.203678727700633,0.497627882440372,0,0.210441855886474,0.130120442962704,0.459804208866946,0.180062129805349,0.150704817835715,0.136072998302656,0,0.187403449119458,0.776110112217047,0.215567992932842,0,0.527853372491847,0.219195732427575,0.834141747676794,0,0,0.199034266818493,11.2354109970118,12.0953516343916,6.81992398549422,0.621377317606506,0.234526059981096,0.180062061461015,0.473489471170421,0,0.308534225774757,0.232533944750408,0.268273401399619,0.233530684734339,0.493679549740441,0.492502392237286,0.405344047729279,0.438599962275997,1.09775057645525,1.07365135008297,0,0,0.991256348951394,0.264450566663544,0.213288250535234,0,0.257734922644187,0.605050573870028,0.667134131534611,0.760902504450237,0,0.329397909448022,0.754005626400808,0.994782360205754,0.779856348476481,0,1.29682829924817,1.39398891278057,0.569003702859245,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.632365371242573,0.590440591918409,0.470996183524124,1.1105744752962,0.296452627087149,0.166845105716094,0,0,0.202860121388503,0,0.25462585178142,0.863088412352432,0.324270453550071,0.274561413188081,2.87536413054709,0,0.312037673114561,0.252578877947112,0.538192240565737,0,0.554259570499814,0.189491411770485,0.325929952884052,0.169745085775188,0,0,0.476087281772027,0.780534591431195,1.41871629695572,0.221464689648775,1.2756381492599,1.14704320301017,0.690739927463582,1.01254341007058,0,1.08781136763742,0.491764273019036,0.827810238914197,0.160550589987792,0,0.163934945376675,0.252470927204373,0,0,0.430846795465598,0.238968797952552,0.445597348164788,0,0,0.292255857911312,0.395287777946524,0,0.425820255624806,0.178065603667255,0.162886959353576,0.989820737835213,1.32745138339963,0,0,0.943025398779491,0.885905678642318,0.922305443831782,0.516856586336442,1.45413491791002,0.356497378384721,0,0,0,0,0,0.388076051348264,0,0.354680467284547,0,0.493647061806363,0.608929898229199,0.938686832254841,0.21183207086382,1.10264199027481,1.6488625294148,0.645857706783622,0.301564624640779,0,0.164140899745061,0.582961673259701,0.18542530201051,1.19609616558497,0.619160603889667,0.740778109478847,0.188368457004691,0.820165366326151,1.83022538565218,19.0375841593118,25.0513099659348,16.5839968565309,1.90934123603023,0,0.813277868507395,0.756037385752609,0.627264888043406,1.31017538247707,1.21377911746339,0.909188012978695,1.04702376793612,1.55537967950151,1.24267862617385,0,0.448549638131936,0.330916980914195,0,0.129159823477731,0,0.117357238645754,0.39061315453185,0.104859344425711,0,0,1.26404448251271,0.608175645870493,1.23253148597793,0.77952493786677,1.25318686967237,0.596044064343795,0.721172697119813,0.295379054349154,0.807731599585181,0.990688486514998,0.604957110821043,0.779663045918019,0.481059208201647,1.05189211963412,0.680191150845634,0.221985953374065,0.179427713218951,0.335769232728157,0.579568782096571,0,0.915758121336325,0.857473516316263,4.01257683228291,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0.419226325255965,0.367687016900028,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.37456602987953,0.256100609619477,0.229741875822453,0,0.115884325944855,0,0,0,0.342869252385415,0.354951612318675,0,0.145346416632329,0.376437521661322,0.16922921578335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| |||
|short_description=p@chr19:46379032..46379054,- | |||
}} |
Revision as of 17:50, 13 September 2013
Short description: | p@chr19:46379032..46379054, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:46379032..46379054, - |
Coexpression cluster: | MCL_coexpression_mm9:318 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.87e-12 | 46 |
mucosa | 1.73e-10 | 15 |
epithelium of mucosa | 1.07e-09 | 9 |
gastrointestinal system epithelium | 1.07e-09 | 9 |
intestinal epithelium | 1.07e-09 | 9 |
simple columnar epithelium | 3.96e-09 | 11 |
intestinal mucosa | 6.01e-09 | 13 |
wall of intestine | 6.01e-09 | 13 |
gastrointestinal system mucosa | 6.01e-09 | 13 |
organ component layer | 5.29e-08 | 24 |
hemolymphoid system | 1.63e-07 | 48 |
immune system | 1.63e-07 | 48 |
unilaminar epithelium | 2.65e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.