FFCP PHASE1:Mm9::chr19:5663674..5663694,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20469|HGNC=|MCL_coexpression_id=3211|UniProt=E9Q0Y4,F6Q641,Q3UE96,Q3V403|association_with_transcript=12bp_to_ENSMUST00000071857,ENSMUST00000080824,ENSMUST00000163953,ENSMUST00000164304,ENSMUST00000169854,NM_001164480,NM_001164481,NM_001164482,NM_001164568,NM_011379,uc008geh.2,uc008gei.2,uc008gej.2,uc008gek.2,uc008gel.2,uc008gem.2,uc012bgz.1,uc012bha.1_5end|description=CAGE_peak_2_at_Sipa1_5end|id=chr19:5663674..5663694,-|ontology_enrichment_celltype=CL:0002031!1.53e-08!25;CL:0000219!6.74e-08!54;CL:0000839!2.25e-07!13;CL:0002320!5.94e-07!46;CL:0000134!5.94e-07!46|ontology_enrichment_celltype_v019_2=CL:0002031,1.52e-08,25;CL:0000219,7.17e-08,54;CL:0000839,2.24e-07,13;CL:0002320,6.32e-07,46;CL:0000134,6.32e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.90e-13!45;UBERON:0003061!1.90e-13!45;UBERON:0002193!5.21e-13!48;UBERON:0003081!5.50e-12!88;UBERON:0000926!4.65e-11!193;UBERON:0004120!4.65e-11!193;UBERON:0006603!4.65e-11!193;UBERON:0002405!3.07e-10!70;UBERON:0002204!1.02e-07!32;UBERON:0004177!1.03e-07!29;UBERON:0002384!5.94e-07!46;UBERON:0002371!6.96e-07!16;UBERON:0001474!7.08e-07!22;UBERON:0004765!7.08e-07!22;UBERON:0001434!7.08e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.07e-13,45;UBERON:0003061,2.07e-13,45;UBERON:0002193,5.67e-13,48;UBERON:0002405,5.67e-13,48;UBERON:0000926,1.70e-11,120;UBERON:0004120,1.70e-11,120;UBERON:0006603,1.70e-11,120;UBERON:0003081,1.95e-11,87;UBERON:0004177,1.02e-07,29;UBERON:0005057,1.02e-07,29;UBERON:0002204,1.11e-07,32;UBERON:0002384,6.32e-07,46;UBERON:0002371,7.72e-07,16;UBERON:0001474,7.73e-07,22;UBERON:0004765,7.73e-07,22;UBERON:0001434,7.73e-07,22|phase1_expression=2.24208385946712,0.348975407639361,0,0,0.500895729946347,0.671517087647559,0.700837921786577,27.5032678930557,5.77233760821834,6.08567768437183,2.22583358693156,2.87179772383211,17.9760766427766,24.6525534821573,17.6548173762301,23.4871310172198,17.4890469532037,35.9626868508391,31.9476630301371,28.8584963222661,5.27268398936633,8.34043990087437,4.4403964153619,3.51983330145495,3.67054849707472,0,0.430761996159075,0,0.570070258369122,0.756090389279792,0.221730510655305,5.71527606113668,7.38077745101484,31.6963362030877,1.1554064790051,0.498703936075477,0.612508068787107,24.2748345827406,17.1893775795236,14.1351410872926,25.2939539853336,32.7861832780054,22.3334762394331,3.52511090331616,3.75094645512204,4.22157529971868,18.7773922643529,8.93903141159831,6.15121311656521,6.80504646759992,13.9986421625363,5.75010257459886,33.5565212115473,27.5637613964311,23.8626597391149,16.9791227783725,8.30946975822394,6.70373719960675,2.42779753031517,1.5869729378161,1.26766280701236,15.2480039431109,15.1180115338894,29.2467408116455,34.6103226898441,27.7087244828979,22.1704081783619,16.9056054341484,2.38486108309499,2.43010688997043,2.94454945891935,4.85606673486466,3.75476519617743,2.32732518508413,2.1086003624012,4.5960939330501,4.40463523997555,2.80912143787413,1.0752457327937,1.45074916503213,2.56165402086747,1.04182674111352,0.558365998002762,2.8138130501584,1.68078072554491,2.35702868378934,3.84403538157578,4.47358669980721,3.63485727999283,7.3304413303582,14.7830889237856,7.74381489283248,1.3599426674155,1.61910957491345,2.59910566979068,2.24013443548668,4.63466586434781,10.7371103224176,5.97507810586598,8.12681021373782,1.54927761754349,6.41632387071589,25.4805239706646,7.11066703153331,1.08245520505607,1.77351905832569,0.505524445014783,3.88225191044804,30.0367945030719,7.71899123137089,6.24547176358089,7.61163695780353,5.07354093963329,6.93324146542064,5.17390311397101,8.04266184509923,4.20231445148436,4.77177877835708,19.4614321428972,11.6472131962135,15.0172232553068,10.6672555689749,0,0.292780797011547,1.67557365450764,3.83185582812887,4.19352935770721,1.79970819298022,3.55796635804581,1.49790639404823,1.83000241127451,1.25654352112864,1.56441888173049,1.02286182932132,4.1557608911912,1.29793010454206,9.77657892963036,7.0911973247753,1.26361379216837,0.841767423545896,4.16385417480652,2.29902104433473,6.84236093260327,3.46621081022145,2.85753296435577,2.0498195245576,2.81105173679186,1.81092359517311,4.74249584452253,4.16033376369202,3.69497360744293,5.2606975782618,6.11703948296315,8.00979983000983,3.70407845534298,7.56330213910274,0.702213187313235,3.3455227924913,7.672414483681,8.07790512888457,3.98694301967864,6.48223421259654,7.33908680314152,3.54175617145327,5.55361606394562,6.0458825635106,5.633741429392,4.32031766758527,5.75959474697182,4.92502392237286,6.4044359541226,7.16379938384128,5.70830299756732,6.30770168173747,1.47202963994889,2.26390147234426,1.98251269790279,1.05780226665418,4.69234151177515,6.0381534683714,5.67016829817211,5.64713868945359,4.66993892074228,3.04361001780095,0.949058123089023,1.31759163779209,3.2673577144035,2.98434708061726,3.8992817423824,2.69645822596266,1.51296634912286,1.99141273254367,9.10405924574792,6.05517116831563,5.63538678365402,5.90588850751411,5.04276466635827,5.961544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| ||
|EntrezGene=20469 | |||
|HGNC= | |||
|MCL_coexpression_id=3211 | |||
|UniProt=E9Q0Y4,F6Q641,Q3UE96,Q3V403 | |||
|association_with_transcript=12bp_to_ENSMUST00000071857,ENSMUST00000080824,ENSMUST00000163953,ENSMUST00000164304,ENSMUST00000169854,NM_001164480,NM_001164481,NM_001164482,NM_001164568,NM_011379,uc008geh.2,uc008gei.2,uc008gej.2,uc008gek.2,uc008gel.2,uc008gem.2,uc012bgz.1,uc012bha.1_5end | |||
|description=CAGE_peak_2_at_Sipa1_5end | |||
|id=chr19:5663674..5663694,- | |||
|ontology_enrichment_celltype=CL:0002031!1.53e-08!25;CL:0000219!6.74e-08!54;CL:0000839!2.25e-07!13;CL:0002320!5.94e-07!46;CL:0000134!5.94e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.52e-08,25;CL:0000219,7.17e-08,54;CL:0000839,2.24e-07,13;CL:0002320,6.32e-07,46;CL:0000134,6.32e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.90e-13!45;UBERON:0003061!1.90e-13!45;UBERON:0002193!5.21e-13!48;UBERON:0003081!5.50e-12!88;UBERON:0000926!4.65e-11!193;UBERON:0004120!4.65e-11!193;UBERON:0006603!4.65e-11!193;UBERON:0002405!3.07e-10!70;UBERON:0002204!1.02e-07!32;UBERON:0004177!1.03e-07!29;UBERON:0002384!5.94e-07!46;UBERON:0002371!6.96e-07!16;UBERON:0001474!7.08e-07!22;UBERON:0004765!7.08e-07!22;UBERON:0001434!7.08e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.07e-13,45;UBERON:0003061,2.07e-13,45;UBERON:0002193,5.67e-13,48;UBERON:0002405,5.67e-13,48;UBERON:0000926,1.70e-11,120;UBERON:0004120,1.70e-11,120;UBERON:0006603,1.70e-11,120;UBERON:0003081,1.95e-11,87;UBERON:0004177,1.02e-07,29;UBERON:0005057,1.02e-07,29;UBERON:0002204,1.11e-07,32;UBERON:0002384,6.32e-07,46;UBERON:0002371,7.72e-07,16;UBERON:0001474,7.73e-07,22;UBERON:0004765,7.73e-07,22;UBERON:0001434,7.73e-07,22 | |||
|phase1_expression=2.24208385946712,0.348975407639361,0,0,0.500895729946347,0.671517087647559,0.700837921786577,27.5032678930557,5.77233760821834,6.08567768437183,2.22583358693156,2.87179772383211,17.9760766427766,24.6525534821573,17.6548173762301,23.4871310172198,17.4890469532037,35.9626868508391,31.9476630301371,28.8584963222661,5.27268398936633,8.34043990087437,4.4403964153619,3.51983330145495,3.67054849707472,0,0.430761996159075,0,0.570070258369122,0.756090389279792,0.221730510655305,5.71527606113668,7.38077745101484,31.6963362030877,1.1554064790051,0.498703936075477,0.612508068787107,24.2748345827406,17.1893775795236,14.1351410872926,25.2939539853336,32.7861832780054,22.3334762394331,3.52511090331616,3.75094645512204,4.22157529971868,18.7773922643529,8.93903141159831,6.15121311656521,6.80504646759992,13.9986421625363,5.75010257459886,33.5565212115473,27.5637613964311,23.8626597391149,16.9791227783725,8.30946975822394,6.70373719960675,2.42779753031517,1.5869729378161,1.26766280701236,15.2480039431109,15.1180115338894,29.2467408116455,34.6103226898441,27.7087244828979,22.1704081783619,16.9056054341484,2.38486108309499,2.43010688997043,2.94454945891935,4.85606673486466,3.75476519617743,2.32732518508413,2.1086003624012,4.5960939330501,4.40463523997555,2.80912143787413,1.0752457327937,1.45074916503213,2.56165402086747,1.04182674111352,0.558365998002762,2.8138130501584,1.68078072554491,2.35702868378934,3.84403538157578,4.47358669980721,3.63485727999283,7.3304413303582,14.7830889237856,7.74381489283248,1.3599426674155,1.61910957491345,2.59910566979068,2.24013443548668,4.63466586434781,10.7371103224176,5.97507810586598,8.12681021373782,1.54927761754349,6.41632387071589,25.4805239706646,7.11066703153331,1.08245520505607,1.77351905832569,0.505524445014783,3.88225191044804,30.0367945030719,7.71899123137089,6.24547176358089,7.61163695780353,5.07354093963329,6.93324146542064,5.17390311397101,8.04266184509923,4.20231445148436,4.77177877835708,19.4614321428972,11.6472131962135,15.0172232553068,10.6672555689749,0,0.292780797011547,1.67557365450764,3.83185582812887,4.19352935770721,1.79970819298022,3.55796635804581,1.49790639404823,1.83000241127451,1.25654352112864,1.56441888173049,1.02286182932132,4.1557608911912,1.29793010454206,9.77657892963036,7.0911973247753,1.26361379216837,0.841767423545896,4.16385417480652,2.29902104433473,6.84236093260327,3.46621081022145,2.85753296435577,2.0498195245576,2.81105173679186,1.81092359517311,4.74249584452253,4.16033376369202,3.69497360744293,5.2606975782618,6.11703948296315,8.00979983000983,3.70407845534298,7.56330213910274,0.702213187313235,3.3455227924913,7.672414483681,8.07790512888457,3.98694301967864,6.48223421259654,7.33908680314152,3.54175617145327,5.55361606394562,6.0458825635106,5.633741429392,4.32031766758527,5.75959474697182,4.92502392237286,6.4044359541226,7.16379938384128,5.70830299756732,6.30770168173747,1.47202963994889,2.26390147234426,1.98251269790279,1.05780226665418,4.69234151177515,6.0381534683714,5.67016829817211,5.64713868945359,4.66993892074228,3.04361001780095,0.949058123089023,1.31759163779209,3.2673577144035,2.98434708061726,3.8992817423824,2.69645822596266,1.51296634912286,1.99141273254367,9.10405924574792,6.05517116831563,5.63538678365402,5.90588850751411,5.04276466635827,5.96154469067708,6.00747102680444,3.69025369949005,2.66897837330337,2.46794327843601,2.07516838961004,10.0107063429656,11.596980711679,11.2431056192427,12.5773275260872,11.576503668116,9.67578236769395,12.6586300478357,6.97181475132652,4.11842119782122,1.43768206527355,5.58211421502755,3.43241440426017,4.04126204715379,2.15276896226295,1.92977408545347,13.1174765018289,4.9267767060326,10.2667935158476,6.11082308790677,7.04070744865506,10.5528942188344,11.9021820443007,10.1469496886055,9.30047350226527,8.858587585951,14.5103839478313,10.651115456523,12.9513736399422,14.8988530338957,10.5553898757491,23.3879444042045,3.44234991113325,4.13905119457099,2.88991061978026,1.87538698547525,4.42624352517024,6.5642441073137,3.47059041357882,4.29482618726302,5.81643173878557,6.69112634267146,6.90675889655422,10.190755108398,3.23848561339915,3.21481443702443,3.55759000151871,2.24924921495265,5.10984306749767,12.4645922567079,10.4247653986289,6.59880491890142,1.32745138339963,7.04063844849446,6.34879469625977,4.14931175462976,8.56375489354241,5.84126781093462,5.42699415653264,3.99887102425256,4.63446591900138,5.05658812697306,3.16255825724996,5.15677716240934,2.38307724027652,4.86164953884538,6.85601024048599,5.35842587578981,5.85222771019503,5.88617098086833,7.24015690649332,4.26250928760439,5.63212099352905,2.33015277950202,1.10264199027481,4.9465875882444,4.68246837418126,5.30753739367772,3.58117032009409,2.29797259643086,3.20628920292836,4.45020724825223,22.5549562653166,11.7640514739037,11.6672552242918,15.822950388394,18.0436380591753,20.132479242174,4.58941760983409,6.01791244991729,4.00779924032829,1.90934123603023,5.3777118908793,6.09958401380546,4.42821897369385,4.18176592028937,3.2754384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| |||
|short_description=p2@Sipa1 | |||
}} |
Revision as of 18:09, 13 September 2013
Short description: | p2@Sipa1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sipa1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3211 |
Association with transcript: | 12bp_to_ENSMUST00000071857, ENSMUST00000080824, ENSMUST00000163953, ENSMUST00000164304, ENSMUST00000169854, NM_001164480, NM_001164481, NM_001164482, NM_001164568, NM_011379, uc008geh.2, uc008gei.2, uc008gej.2, uc008gek.2, uc008gel.2, uc008gem.2, uc012bgz.1, uc012bha.1_5end |
EntrezGene: | Sipa1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.52e-08 | 25 |
motile cell | 7.17e-08 | 54 |
myeloid lineage restricted progenitor cell | 2.24e-07 | 13 |
connective tissue cell | 6.32e-07 | 46 |
mesenchymal cell | 6.32e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.07e-13 | 45 |
blood island | 2.07e-13 | 45 |
hemolymphoid system | 5.67e-13 | 48 |
immune system | 5.67e-13 | 48 |
mesoderm | 1.70e-11 | 120 |
mesoderm-derived structure | 1.70e-11 | 120 |
presumptive mesoderm | 1.70e-11 | 120 |
lateral plate mesoderm | 1.95e-11 | 87 |
hemopoietic organ | 1.02e-07 | 29 |
immune organ | 1.02e-07 | 29 |
musculoskeletal system | 1.11e-07 | 32 |
connective tissue | 6.32e-07 | 46 |
bone marrow | 7.72e-07 | 16 |
bone element | 7.73e-07 | 22 |
skeletal element | 7.73e-07 | 22 |
skeletal system | 7.73e-07 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.