FFCP PHASE1:Mm9::chr1:127331348..127331362,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:127331348..127331362,+|id=chr1:127331348..127331362,+|ontology_enrichment_celltype=CL:0000988!2.55e-11!32;CL:0002032!2.55e-11!32;CL:0000037!2.55e-11!32;CL:0000566!2.55e-11!32;CL:0000837!2.55e-11!32;CL:0000791!3.73e-10!9;CL:0000789!3.73e-10!9;CL:0002420!3.73e-10!9;CL:0002419!3.73e-10!9;CL:0000790!3.73e-10!9;CL:0000838!5.97e-10!12;CL:0000084!2.72e-09!11;CL:0000827!2.72e-09!11;CL:0000624!3.09e-09!8;CL:0000542!6.71e-09!13;CL:0000051!6.71e-09!13;CL:0000063!1.49e-08!66;CL:0000893!1.99e-07!6;CL:0002489!1.99e-07!6;CL:0000898!1.99e-07!6;CL:0000809!1.99e-07!6;CL:0000810!1.99e-07!6;CL:0000895!1.99e-07!6;CL:0000808!1.99e-07!6;CL:0000894!1.99e-07!6;CL:0000806!1.99e-07!6;CL:0000807!1.99e-07!6;CL:0000805!1.99e-07!6;CL:0002425!1.99e-07!6;CL:0002436!1.99e-07!6;CL:0002427!1.99e-07!6;CL:0002428!1.99e-07!6;CL:0002429!1.99e-07!6;CL:0002433!1.99e-07!6;CL:0002431!1.99e-07!6;CL:0002432!1.99e-07!6;CL:0002031!2.30e-07!25;CL:0002320!3.12e-07!46;CL:0000134!3.12e-07!46|ontology_enrichment_celltype_v019_2=CL:0000791,2.11e-24,9;CL:0000789,2.11e-24,9;CL:0002420,2.11e-24,9;CL:0002419,2.11e-24,9;CL:0000790,2.11e-24,9;CL:0000624,2.29e-21,8;CL:0000893,4.25e-21,6;CL:0002489,4.25e-21,6;CL:0000898,4.25e-21,6;CL:0000809,4.25e-21,6;CL:0000810,4.25e-21,6;CL:0000895,4.25e-21,6;CL:0000808,4.25e-21,6;CL:0000894,4.25e-21,6;CL:0000806,4.25e-21,6;CL:0000807,4.25e-21,6;CL:0000805,4.25e-21,6;CL:0002425,4.25e-21,6;CL:0002436,4.25e-21,6;CL:0002427,4.25e-21,6;CL:0002428,4.25e-21,6;CL:0002429,4.25e-21,6;CL:0002433,4.25e-21,6;CL:0002431,4.25e-21,6;CL:0002432,4.25e-21,6;CL:0000084,9.09e-20,11;CL:0000827,9.09e-20,11;CL:0000838,4.99e-18,12;CL:0000542,1.48e-16,13;CL:0000051,1.48e-16,13;CL:0000988,8.13e-14,32;CL:0002032,8.13e-14,32;CL:0000037,8.13e-14,32;CL:0000837,8.13e-14,32;CL:0000738,2.14e-12,17;CL:0002087,2.14e-12,17;CL:0002320,1.25e-10,46;CL:0000134,1.25e-10,46;CL:0000034,6.11e-10,97;CL:0000219,1.06e-08,54;CL:0002031,4.58e-08,25;CL:0000723,5.00e-07,91;CL:0000048,5.00e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.23e-11,3;DOID:4045,1.23e-11,3|ontology_enrichment_uberon=UBERON:0002193!6.25e-11!48;UBERON:0006562!1.30e-09!24;UBERON:0001557!1.30e-09!24;UBERON:0001042!1.30e-09!24;UBERON:0008814!1.30e-09!24;UBERON:0009145!1.30e-09!24;UBERON:0002390!3.16e-09!45;UBERON:0003061!3.16e-09!45;UBERON:0002370!4.59e-09!23;UBERON:0000974!4.59e-09!23;UBERON:0004807!4.59e-09!23;UBERON:0005058!4.59e-09!23;UBERON:0003351!4.59e-09!23;UBERON:0009113!4.59e-09!23;UBERON:0003295!4.59e-09!23;UBERON:0009722!4.59e-09!23;UBERON:0005562!4.59e-09!23;UBERON:0007690!4.59e-09!23;UBERON:0003408!1.84e-08!24;UBERON:0000072!6.55e-08!27;UBERON:0004177!7.94e-08!29;UBERON:0002384!3.12e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.25e-10,46|phase1_expression=0,0,1.36499771816861,0,0,1.84667199103079,0.934450562382103,3.61545305636414,5.490760163915,3.04283884218592,2.05461561870606,1.11681022593471,1.88320802924326,3.4093956943409,0.666219523631325,0.202475267389826,0,0.473193248037357,0.548457734422955,0.42438965179803,0.0850432901510698,0.198581902401771,0,0.159992422793407,0.91763712426868,0.57423196411502,0.86152399231815,0.646413698057667,0,0,0,0,0,0,0.866554859253824,0,0.204169356262369,2.92972141515835,3.906676722619,2.09409497589519,35.8821207698919,7.5135003345429,5.34061388334269,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0.335565212115473,0.725362142011344,1.68046899571232,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,2.02905142091174,0,0,0,0,0,0,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0,0,3.83408398418945,1.19980546198682,0.889491589511453,0,0.457500602818626,0.251308704225729,0,0,0.20778804455956,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0.205782136407943,0,0.702213187313235,2.31613116403244,1.13665399758237,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0,0.630869845692382,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0.120625849856312,0,0,0.291480836629851,0,0.170870880797853,0.206386867963223,0,0,0,0,5.43930975980337,6.43776680688827,2.3493995546752,0,0,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0.316011120628178,0,0,0.25984164595559,0.358053391334963,0.79472541912506,0.360586348559907,0,0.302899349844443,0.228620419965,0.100826185136841,0.38983152295901,0.769694733122636,0.467507608726276,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:127331348..127331362,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:127331348..127331362,+ | |||
|id=chr1:127331348..127331362,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.55e-11!32;CL:0002032!2.55e-11!32;CL:0000037!2.55e-11!32;CL:0000566!2.55e-11!32;CL:0000837!2.55e-11!32;CL:0000791!3.73e-10!9;CL:0000789!3.73e-10!9;CL:0002420!3.73e-10!9;CL:0002419!3.73e-10!9;CL:0000790!3.73e-10!9;CL:0000838!5.97e-10!12;CL:0000084!2.72e-09!11;CL:0000827!2.72e-09!11;CL:0000624!3.09e-09!8;CL:0000542!6.71e-09!13;CL:0000051!6.71e-09!13;CL:0000063!1.49e-08!66;CL:0000893!1.99e-07!6;CL:0002489!1.99e-07!6;CL:0000898!1.99e-07!6;CL:0000809!1.99e-07!6;CL:0000810!1.99e-07!6;CL:0000895!1.99e-07!6;CL:0000808!1.99e-07!6;CL:0000894!1.99e-07!6;CL:0000806!1.99e-07!6;CL:0000807!1.99e-07!6;CL:0000805!1.99e-07!6;CL:0002425!1.99e-07!6;CL:0002436!1.99e-07!6;CL:0002427!1.99e-07!6;CL:0002428!1.99e-07!6;CL:0002429!1.99e-07!6;CL:0002433!1.99e-07!6;CL:0002431!1.99e-07!6;CL:0002432!1.99e-07!6;CL:0002031!2.30e-07!25;CL:0002320!3.12e-07!46;CL:0000134!3.12e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.11e-24,9;CL:0000789,2.11e-24,9;CL:0002420,2.11e-24,9;CL:0002419,2.11e-24,9;CL:0000790,2.11e-24,9;CL:0000624,2.29e-21,8;CL:0000893,4.25e-21,6;CL:0002489,4.25e-21,6;CL:0000898,4.25e-21,6;CL:0000809,4.25e-21,6;CL:0000810,4.25e-21,6;CL:0000895,4.25e-21,6;CL:0000808,4.25e-21,6;CL:0000894,4.25e-21,6;CL:0000806,4.25e-21,6;CL:0000807,4.25e-21,6;CL:0000805,4.25e-21,6;CL:0002425,4.25e-21,6;CL:0002436,4.25e-21,6;CL:0002427,4.25e-21,6;CL:0002428,4.25e-21,6;CL:0002429,4.25e-21,6;CL:0002433,4.25e-21,6;CL:0002431,4.25e-21,6;CL:0002432,4.25e-21,6;CL:0000084,9.09e-20,11;CL:0000827,9.09e-20,11;CL:0000838,4.99e-18,12;CL:0000542,1.48e-16,13;CL:0000051,1.48e-16,13;CL:0000988,8.13e-14,32;CL:0002032,8.13e-14,32;CL:0000037,8.13e-14,32;CL:0000837,8.13e-14,32;CL:0000738,2.14e-12,17;CL:0002087,2.14e-12,17;CL:0002320,1.25e-10,46;CL:0000134,1.25e-10,46;CL:0000034,6.11e-10,97;CL:0000219,1.06e-08,54;CL:0002031,4.58e-08,25;CL:0000723,5.00e-07,91;CL:0000048,5.00e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.23e-11,3;DOID:4045,1.23e-11,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!6.25e-11!48;UBERON:0006562!1.30e-09!24;UBERON:0001557!1.30e-09!24;UBERON:0001042!1.30e-09!24;UBERON:0008814!1.30e-09!24;UBERON:0009145!1.30e-09!24;UBERON:0002390!3.16e-09!45;UBERON:0003061!3.16e-09!45;UBERON:0002370!4.59e-09!23;UBERON:0000974!4.59e-09!23;UBERON:0004807!4.59e-09!23;UBERON:0005058!4.59e-09!23;UBERON:0003351!4.59e-09!23;UBERON:0009113!4.59e-09!23;UBERON:0003295!4.59e-09!23;UBERON:0009722!4.59e-09!23;UBERON:0005562!4.59e-09!23;UBERON:0007690!4.59e-09!23;UBERON:0003408!1.84e-08!24;UBERON:0000072!6.55e-08!27;UBERON:0004177!7.94e-08!29;UBERON:0002384!3.12e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.25e-10,46 | |||
|phase1_expression=0,0,1.36499771816861,0,0,1.84667199103079,0.934450562382103,3.61545305636414,5.490760163915,3.04283884218592,2.05461561870606,1.11681022593471,1.88320802924326,3.4093956943409,0.666219523631325,0.202475267389826,0,0.473193248037357,0.548457734422955,0.42438965179803,0.0850432901510698,0.198581902401771,0,0.159992422793407,0.91763712426868,0.57423196411502,0.86152399231815,0.646413698057667,0,0,0,0,0,0,0.866554859253824,0,0.204169356262369,2.92972141515835,3.906676722619,2.09409497589519,35.8821207698919,7.5135003345429,5.34061388334269,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0.335565212115473,0.725362142011344,1.68046899571232,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,2.02905142091174,0,0,0,0,0,0,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0,0,3.83408398418945,1.19980546198682,0.889491589511453,0,0.457500602818626,0.251308704225729,0,0,0.20778804455956,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0.205782136407943,0,0.702213187313235,2.31613116403244,1.13665399758237,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0,0.630869845692382,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0.120625849856312,0,0,0.291480836629851,0,0.170870880797853,0.206386867963223,0,0,0,0,5.43930975980337,6.43776680688827,2.3493995546752,0,0,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0.316011120628178,0,0,0.25984164595559,0.358053391334963,0.79472541912506,0.360586348559907,0,0.302899349844443,0.228620419965,0.100826185136841,0.38983152295901,0.769694733122636,0.467507608726276,0.226730383615211,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:127331348..127331362,+ | |||
}} |
Revision as of 18:39, 13 September 2013
Short description: | p@chr1:127331348..127331362, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:127331348..127331362, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.25e-10 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.23e-11 | 3 |
muscle cancer | 1.23e-11 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.