FFCP PHASE1:Mm9::chr1:130487393..130487410,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:130487393..130487410,-|id=chr1:130487393..130487410,-|ontology_enrichment_celltype=CL:0000988!2.93e-08!32;CL:0002032!2.93e-08!32;CL:0000037!2.93e-08!32;CL:0000566!2.93e-08!32;CL:0000837!2.93e-08!32|ontology_enrichment_celltype_v019_2=CL:0000988,1.89e-19,32;CL:0002032,1.89e-19,32;CL:0000037,1.89e-19,32;CL:0000837,1.89e-19,32;CL:0000049,1.87e-16,19;CL:0002320,1.79e-12,46;CL:0000134,1.79e-12,46;CL:0000763,1.99e-10,16;CL:0000219,4.04e-10,54;CL:0000034,9.54e-10,97;CL:0002031,3.13e-09,25;CL:0000553,1.42e-07,6;CL:0000556,1.42e-07,6;CL:0000723,2.15e-07,91;CL:0000048,2.15e-07,91;CL:0000557,4.26e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,6.66e-10,3;DOID:4045,6.66e-10,3|ontology_enrichment_uberon=UBERON:0002390!3.82e-14!45;UBERON:0003061!3.82e-14!45;UBERON:0002193!2.06e-13!48;UBERON:0004177!1.56e-08!29;UBERON:0003081!1.81e-08!88;UBERON:0002405!2.05e-08!70;UBERON:0001474!2.43e-07!22;UBERON:0004765!2.43e-07!22;UBERON:0001434!2.43e-07!22;UBERON:0002204!9.47e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.79e-12,46;UBERON:0002204,6.73e-11,32;UBERON:0002390,1.20e-10,45;UBERON:0003061,1.20e-10,45;UBERON:0002371,1.99e-10,16;UBERON:0002193,8.66e-10,48;UBERON:0002405,8.66e-10,48;UBERON:0001474,3.33e-09,22;UBERON:0004765,3.33e-09,22;UBERON:0001434,3.33e-09,22|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,2.53419699873,0.70219357896598,0,0,0,0.262261207256992,0.333109761815663,1.01237633694913,0.699561878128147,2.83915948822414,4.2505474417779,4.2438965179803,0.17008658030214,2.6808556824239,2.08959831311148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27797446105362,9.37602413428561,4.71171369576418,39.999741186109,8.87959130445979,10.6812277666854,0,0,0,0,0,0,0,0,0,17.2816084239468,0,1.00828139742739,0,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0,0,0,0.420649922702764,0,0,0.244981598429908,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0.230615497256059,0.301445281105245,0.23517741427141,0,0,0.144599356919912,4.42305275974937,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0,3.47463861067169,5.99902730993408,3.68503658511888,0,0,0.376963056338593,0,0,0,0,0.203678727700633,0.746441823660558,0,0,0.260240885925407,0.229902104433473,0.180062129805349,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,4.91549231119264,10.0365683774739,8.24074148247219,0,0,0,0.23674473558521,0.393528463494808,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0.134206418760372,0.210289948564127,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0,0,0,0.369506380333209,0.189491411770485,0,0,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.478364305972461,0.327726629431476,0.172684981865896,0.144649058581512,3.01582567878545,0,0,0,0.321101179975584,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0.258717367565509,0,0,0,0,0,0.23467170806371,0,0,0,0.161464426695906,0.180938774784468,0.119372344003136,0,0,0.18542530201051,0.170870880797853,0.82554747185289,0.740778109478847,0.565105371014073,0.820165366326151,0.228778173206523,2.88963330989554,3.91864066506242,3.31679937130617,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0,0.26175594198403,0,0.621339313086926,0,0,0.165458490457098,0,0.258319646955462,0.337912250981556,0,0,0,0,0,1.58005560314089,0,0.205421914329655,0.25984164595559,2.14832034800978,1.39076948346885,0.120195449519969,0.886137163047463,0.706765149637033,0.762068066549998,1.31074040677893,0.877120926657772,2.40529604100824,2.33753804363138,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0.341467211508268,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0,0.192075457214608,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0,0,0.177475806159338,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p@chr1:130487393..130487410,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:130487393..130487410,- | |||
|id=chr1:130487393..130487410,- | |||
|ontology_enrichment_celltype=CL:0000988!2.93e-08!32;CL:0002032!2.93e-08!32;CL:0000037!2.93e-08!32;CL:0000566!2.93e-08!32;CL:0000837!2.93e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.89e-19,32;CL:0002032,1.89e-19,32;CL:0000037,1.89e-19,32;CL:0000837,1.89e-19,32;CL:0000049,1.87e-16,19;CL:0002320,1.79e-12,46;CL:0000134,1.79e-12,46;CL:0000763,1.99e-10,16;CL:0000219,4.04e-10,54;CL:0000034,9.54e-10,97;CL:0002031,3.13e-09,25;CL:0000553,1.42e-07,6;CL:0000556,1.42e-07,6;CL:0000723,2.15e-07,91;CL:0000048,2.15e-07,91;CL:0000557,4.26e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,6.66e-10,3;DOID:4045,6.66e-10,3 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.82e-14!45;UBERON:0003061!3.82e-14!45;UBERON:0002193!2.06e-13!48;UBERON:0004177!1.56e-08!29;UBERON:0003081!1.81e-08!88;UBERON:0002405!2.05e-08!70;UBERON:0001474!2.43e-07!22;UBERON:0004765!2.43e-07!22;UBERON:0001434!2.43e-07!22;UBERON:0002204!9.47e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.79e-12,46;UBERON:0002204,6.73e-11,32;UBERON:0002390,1.20e-10,45;UBERON:0003061,1.20e-10,45;UBERON:0002371,1.99e-10,16;UBERON:0002193,8.66e-10,48;UBERON:0002405,8.66e-10,48;UBERON:0001474,3.33e-09,22;UBERON:0004765,3.33e-09,22;UBERON:0001434,3.33e-09,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,2.53419699873,0.70219357896598,0,0,0,0.262261207256992,0.333109761815663,1.01237633694913,0.699561878128147,2.83915948822414,4.2505474417779,4.2438965179803,0.17008658030214,2.6808556824239,2.08959831311148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27797446105362,9.37602413428561,4.71171369576418,39.999741186109,8.87959130445979,10.6812277666854,0,0,0,0,0,0,0,0,0,17.2816084239468,0,1.00828139742739,0,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0,0,0,0.420649922702764,0,0,0.244981598429908,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0.230615497256059,0.301445281105245,0.23517741427141,0,0,0.144599356919912,4.42305275974937,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0,3.47463861067169,5.99902730993408,3.68503658511888,0,0,0.376963056338593,0,0,0,0,0.203678727700633,0.746441823660558,0,0,0.260240885925407,0.229902104433473,0.180062129805349,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,4.91549231119264,10.0365683774739,8.24074148247219,0,0,0,0.23674473558521,0.393528463494808,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0.134206418760372,0.210289948564127,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0,0,0,0.369506380333209,0.189491411770485,0,0,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.478364305972461,0.327726629431476,0.172684981865896,0.144649058581512,3.01582567878545,0,0,0,0.321101179975584,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0.258717367565509,0,0,0,0,0,0.23467170806371,0,0,0,0.161464426695906,0.180938774784468,0.119372344003136,0,0,0.18542530201051,0.170870880797853,0.82554747185289,0.740778109478847,0.565105371014073,0.820165366326151,0.228778173206523,2.88963330989554,3.91864066506242,3.31679937130617,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0,0.26175594198403,0,0.621339313086926,0,0,0.165458490457098,0,0.258319646955462,0.337912250981556,0,0,0,0,0,1.58005560314089,0,0.205421914329655,0.25984164595559,2.14832034800978,1.39076948346885,0.120195449519969,0.886137163047463,0.706765149637033,0.762068066549998,1.31074040677893,0.877120926657772,2.40529604100824,2.33753804363138,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0.341467211508268,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0,0.192075457214608,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0,0,0.177475806159338,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr1:130487393..130487410,- | |||
}} |
Revision as of 18:43, 13 September 2013
Short description: | p@chr1:130487393..130487410, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:130487393..130487410, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.89e-19 | 32 |
hematopoietic oligopotent progenitor cell | 1.89e-19 | 32 |
hematopoietic stem cell | 1.89e-19 | 32 |
hematopoietic multipotent progenitor cell | 1.89e-19 | 32 |
common myeloid progenitor | 1.87e-16 | 19 |
connective tissue cell | 1.79e-12 | 46 |
mesenchymal cell | 1.79e-12 | 46 |
myeloid cell | 1.99e-10 | 16 |
motile cell | 4.04e-10 | 54 |
stem cell | 9.54e-10 | 97 |
hematopoietic lineage restricted progenitor cell | 3.13e-09 | 25 |
megakaryocyte progenitor cell | 1.42e-07 | 6 |
megakaryocyte | 1.42e-07 | 6 |
somatic stem cell | 2.15e-07 | 91 |
multi fate stem cell | 2.15e-07 | 91 |
granulocyte monocyte progenitor cell | 4.26e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.79e-12 | 46 |
musculoskeletal system | 6.73e-11 | 32 |
hematopoietic system | 1.20e-10 | 45 |
blood island | 1.20e-10 | 45 |
bone marrow | 1.99e-10 | 16 |
hemolymphoid system | 8.66e-10 | 48 |
immune system | 8.66e-10 | 48 |
bone element | 3.33e-09 | 22 |
skeletal element | 3.33e-09 | 22 |
skeletal system | 3.33e-09 | 22 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 6.66e-10 | 3 |
muscle cancer | 6.66e-10 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.