FFCP PHASE1:Mm9::chr1:13152564..13152597,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=807|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:13152564..13152597,-|id=chr1:13152564..13152597,-|ontology_enrichment_celltype=CL:0000988!1.59e-13!32;CL:0002032!1.59e-13!32;CL:0000037!1.59e-13!32;CL:0000566!1.59e-13!32;CL:0000837!1.59e-13!32;CL:0000838!2.18e-13!12;CL:0000791!2.36e-13!9;CL:0000789!2.36e-13!9;CL:0002420!2.36e-13!9;CL:0002419!2.36e-13!9;CL:0000790!2.36e-13!9;CL:0000084!1.13e-12!11;CL:0000827!1.13e-12!11;CL:0000624!3.45e-12!8;CL:0000542!4.08e-12!13;CL:0000051!4.08e-12!13;CL:0000893!7.35e-10!6;CL:0002489!7.35e-10!6;CL:0000898!7.35e-10!6;CL:0000809!7.35e-10!6;CL:0000810!7.35e-10!6;CL:0000895!7.35e-10!6;CL:0000808!7.35e-10!6;CL:0000894!7.35e-10!6;CL:0000806!7.35e-10!6;CL:0000807!7.35e-10!6;CL:0000805!7.35e-10!6;CL:0002425!7.35e-10!6;CL:0002436!7.35e-10!6;CL:0002427!7.35e-10!6;CL:0002428!7.35e-10!6;CL:0002429!7.35e-10!6;CL:0002433!7.35e-10!6;CL:0002431!7.35e-10!6;CL:0002432!7.35e-10!6;CL:0002320!1.49e-08!46;CL:0000134!1.49e-08!46;CL:0000738!1.51e-08!17;CL:0002087!1.51e-08!17;CL:0002031!5.13e-08!25;CL:0000219!3.80e-07!54|ontology_enrichment_celltype_v019_2=CL:0000791,3.01e-22,9;CL:0000789,3.01e-22,9;CL:0002420,3.01e-22,9;CL:0002419,3.01e-22,9;CL:0000790,3.01e-22,9;CL:0000624,1.06e-19,8;CL:0000893,1.18e-19,6;CL:0002489,1.18e-19,6;CL:0000898,1.18e-19,6;CL:0000809,1.18e-19,6;CL:0000810,1.18e-19,6;CL:0000895,1.18e-19,6;CL:0000808,1.18e-19,6;CL:0000894,1.18e-19,6;CL:0000806,1.18e-19,6;CL:0000807,1.18e-19,6;CL:0000805,1.18e-19,6;CL:0002425,1.18e-19,6;CL:0002436,1.18e-19,6;CL:0002427,1.18e-19,6;CL:0002428,1.18e-19,6;CL:0002429,1.18e-19,6;CL:0002433,1.18e-19,6;CL:0002431,1.18e-19,6;CL:0002432,1.18e-19,6;CL:0000084,5.65e-18,11;CL:0000827,5.65e-18,11;CL:0000988,6.00e-17,32;CL:0002032,6.00e-17,32;CL:0000037,6.00e-17,32;CL:0000837,6.00e-17,32;CL:0000838,2.27e-16,12;CL:0000542,5.17e-15,13;CL:0000051,5.17e-15,13;CL:0000738,3.53e-11,17;CL:0002087,3.53e-11,17;CL:0002320,6.56e-11,46;CL:0000134,6.56e-11,46;CL:0000219,7.19e-09,54;CL:0000034,3.33e-08,97;CL:0002031,3.41e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!4.78e-21!23;UBERON:0000974!4.78e-21!23;UBERON:0004807!4.78e-21!23;UBERON:0005058!4.78e-21!23;UBERON:0003351!4.78e-21!23;UBERON:0009113!4.78e-21!23;UBERON:0003295!4.78e-21!23;UBERON:0009722!4.78e-21!23;UBERON:0005562!4.78e-21!23;UBERON:0007690!4.78e-21!23;UBERON:0004177!1.61e-20!29;UBERON:0006562!6.70e-20!24;UBERON:0003408!6.70e-20!24;UBERON:0001557!6.70e-20!24;UBERON:0001042!6.70e-20!24;UBERON:0008814!6.70e-20!24;UBERON:0009145!6.70e-20!24;UBERON:0002390!5.23e-19!45;UBERON:0003061!5.23e-19!45;UBERON:0002193!8.21e-19!48;UBERON:0000072!5.59e-17!27;UBERON:0002405!5.77e-15!70;UBERON:0005057!6.74e-14!51;UBERON:0000063!1.08e-11!35;UBERON:0000065!2.63e-11!41;UBERON:0001004!6.95e-11!42;UBERON:0003929!2.77e-10!55;UBERON:0000490!2.88e-09!66;UBERON:0003081!4.73e-09!88;UBERON:0002368!8.55e-09!60;UBERON:0002384!1.49e-08!46;UBERON:0005911!3.03e-08!69;UBERON:0002530!1.39e-07!65|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.04e-17,23;UBERON:0000974,5.04e-17,23;UBERON:0004807,5.04e-17,23;UBERON:0005058,5.04e-17,23;UBERON:0003351,5.04e-17,23;UBERON:0009113,5.04e-17,23;UBERON:0003295,5.04e-17,23;UBERON:0009722,5.04e-17,23;UBERON:0005562,5.04e-17,23;UBERON:0007690,5.04e-17,23;UBERON:0006562,3.22e-16,24;UBERON:0003408,3.22e-16,24;UBERON:0001557,3.22e-16,24;UBERON:0001042,3.22e-16,24;UBERON:0008814,3.22e-16,24;UBERON:0009145,3.22e-16,24;UBERON:0000072,3.70e-14,27;UBERON:0002193,4.88e-13,48;UBERON:0002405,4.88e-13,48;UBERON:0004177,5.07e-13,29;UBERON:0005057,5.07e-13,29;UBERON:0002390,2.45e-12,45;UBERON:0003061,2.45e-12,45;UBERON:0002384,6.56e-11,46;UBERON:0000077,2.15e-10,35;UBERON:0007811,4.85e-10,36;UBERON:0000065,1.54e-08,41;UBERON:0001004,2.79e-08,42;UBERON:0000153,4.90e-08,43|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,29.0024767632433,22.4701945269114,53.9336599910341,10.9287857823611,3.93761678841773,1.57356724354195,0,0,0.699561878128147,0.315462165358238,0.137114433605739,0,0.0850432901510698,0.297872853602656,0,0,0,0,0,0,0,0.504060259519861,0,0,0,0,0,0,0.204169356262369,4.18531630736908,4.6880120671428,0,8.2352408324342,7.5135003345429,2.42755176515577,0,0,0,0,0,0,0,0,0,0.167782606057736,9.42970784614748,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0,0.173485326766136,0,0,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0,10.0644704584973,7.7987355029143,7.62421362438388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80885274925294,2.31613116403244,1.70498099637356,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0.500535317148282,0,0,0,0,0.50925170356284,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0.0603129249281559,0.119372344003136,0,0,0,0.341741761595705,0,0.185194527369712,0.188368457004691,0,0,18.6976272993241,15.8145141125734,19.3479963326193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.632022241256357,1.01362607645082,1.54066435747241,1.16928740680016,0.716106782669926,1.19208812868759,0.961563596159751,0.738447635872886,0.807731599585181,1.21930890648,1.41156659191577,0.877120926657772,0.962118416403295,0.233753804363138,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:13152564..13152597,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=807 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:13152564..13152597,- | |||
|id=chr1:13152564..13152597,- | |||
|ontology_enrichment_celltype=CL:0000988!1.59e-13!32;CL:0002032!1.59e-13!32;CL:0000037!1.59e-13!32;CL:0000566!1.59e-13!32;CL:0000837!1.59e-13!32;CL:0000838!2.18e-13!12;CL:0000791!2.36e-13!9;CL:0000789!2.36e-13!9;CL:0002420!2.36e-13!9;CL:0002419!2.36e-13!9;CL:0000790!2.36e-13!9;CL:0000084!1.13e-12!11;CL:0000827!1.13e-12!11;CL:0000624!3.45e-12!8;CL:0000542!4.08e-12!13;CL:0000051!4.08e-12!13;CL:0000893!7.35e-10!6;CL:0002489!7.35e-10!6;CL:0000898!7.35e-10!6;CL:0000809!7.35e-10!6;CL:0000810!7.35e-10!6;CL:0000895!7.35e-10!6;CL:0000808!7.35e-10!6;CL:0000894!7.35e-10!6;CL:0000806!7.35e-10!6;CL:0000807!7.35e-10!6;CL:0000805!7.35e-10!6;CL:0002425!7.35e-10!6;CL:0002436!7.35e-10!6;CL:0002427!7.35e-10!6;CL:0002428!7.35e-10!6;CL:0002429!7.35e-10!6;CL:0002433!7.35e-10!6;CL:0002431!7.35e-10!6;CL:0002432!7.35e-10!6;CL:0002320!1.49e-08!46;CL:0000134!1.49e-08!46;CL:0000738!1.51e-08!17;CL:0002087!1.51e-08!17;CL:0002031!5.13e-08!25;CL:0000219!3.80e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.01e-22,9;CL:0000789,3.01e-22,9;CL:0002420,3.01e-22,9;CL:0002419,3.01e-22,9;CL:0000790,3.01e-22,9;CL:0000624,1.06e-19,8;CL:0000893,1.18e-19,6;CL:0002489,1.18e-19,6;CL:0000898,1.18e-19,6;CL:0000809,1.18e-19,6;CL:0000810,1.18e-19,6;CL:0000895,1.18e-19,6;CL:0000808,1.18e-19,6;CL:0000894,1.18e-19,6;CL:0000806,1.18e-19,6;CL:0000807,1.18e-19,6;CL:0000805,1.18e-19,6;CL:0002425,1.18e-19,6;CL:0002436,1.18e-19,6;CL:0002427,1.18e-19,6;CL:0002428,1.18e-19,6;CL:0002429,1.18e-19,6;CL:0002433,1.18e-19,6;CL:0002431,1.18e-19,6;CL:0002432,1.18e-19,6;CL:0000084,5.65e-18,11;CL:0000827,5.65e-18,11;CL:0000988,6.00e-17,32;CL:0002032,6.00e-17,32;CL:0000037,6.00e-17,32;CL:0000837,6.00e-17,32;CL:0000838,2.27e-16,12;CL:0000542,5.17e-15,13;CL:0000051,5.17e-15,13;CL:0000738,3.53e-11,17;CL:0002087,3.53e-11,17;CL:0002320,6.56e-11,46;CL:0000134,6.56e-11,46;CL:0000219,7.19e-09,54;CL:0000034,3.33e-08,97;CL:0002031,3.41e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!4.78e-21!23;UBERON:0000974!4.78e-21!23;UBERON:0004807!4.78e-21!23;UBERON:0005058!4.78e-21!23;UBERON:0003351!4.78e-21!23;UBERON:0009113!4.78e-21!23;UBERON:0003295!4.78e-21!23;UBERON:0009722!4.78e-21!23;UBERON:0005562!4.78e-21!23;UBERON:0007690!4.78e-21!23;UBERON:0004177!1.61e-20!29;UBERON:0006562!6.70e-20!24;UBERON:0003408!6.70e-20!24;UBERON:0001557!6.70e-20!24;UBERON:0001042!6.70e-20!24;UBERON:0008814!6.70e-20!24;UBERON:0009145!6.70e-20!24;UBERON:0002390!5.23e-19!45;UBERON:0003061!5.23e-19!45;UBERON:0002193!8.21e-19!48;UBERON:0000072!5.59e-17!27;UBERON:0002405!5.77e-15!70;UBERON:0005057!6.74e-14!51;UBERON:0000063!1.08e-11!35;UBERON:0000065!2.63e-11!41;UBERON:0001004!6.95e-11!42;UBERON:0003929!2.77e-10!55;UBERON:0000490!2.88e-09!66;UBERON:0003081!4.73e-09!88;UBERON:0002368!8.55e-09!60;UBERON:0002384!1.49e-08!46;UBERON:0005911!3.03e-08!69;UBERON:0002530!1.39e-07!65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.04e-17,23;UBERON:0000974,5.04e-17,23;UBERON:0004807,5.04e-17,23;UBERON:0005058,5.04e-17,23;UBERON:0003351,5.04e-17,23;UBERON:0009113,5.04e-17,23;UBERON:0003295,5.04e-17,23;UBERON:0009722,5.04e-17,23;UBERON:0005562,5.04e-17,23;UBERON:0007690,5.04e-17,23;UBERON:0006562,3.22e-16,24;UBERON:0003408,3.22e-16,24;UBERON:0001557,3.22e-16,24;UBERON:0001042,3.22e-16,24;UBERON:0008814,3.22e-16,24;UBERON:0009145,3.22e-16,24;UBERON:0000072,3.70e-14,27;UBERON:0002193,4.88e-13,48;UBERON:0002405,4.88e-13,48;UBERON:0004177,5.07e-13,29;UBERON:0005057,5.07e-13,29;UBERON:0002390,2.45e-12,45;UBERON:0003061,2.45e-12,45;UBERON:0002384,6.56e-11,46;UBERON:0000077,2.15e-10,35;UBERON:0007811,4.85e-10,36;UBERON:0000065,1.54e-08,41;UBERON:0001004,2.79e-08,42;UBERON:0000153,4.90e-08,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,29.0024767632433,22.4701945269114,53.9336599910341,10.9287857823611,3.93761678841773,1.57356724354195,0,0,0.699561878128147,0.315462165358238,0.137114433605739,0,0.0850432901510698,0.297872853602656,0,0,0,0,0,0,0,0.504060259519861,0,0,0,0,0,0,0.204169356262369,4.18531630736908,4.6880120671428,0,8.2352408324342,7.5135003345429,2.42755176515577,0,0,0,0,0,0,0,0,0,0.167782606057736,9.42970784614748,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0,0.173485326766136,0,0,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0,10.0644704584973,7.7987355029143,7.62421362438388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80885274925294,2.31613116403244,1.70498099637356,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0.500535317148282,0,0,0,0,0.50925170356284,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0.0603129249281559,0.119372344003136,0,0,0,0.341741761595705,0,0.185194527369712,0.188368457004691,0,0,18.6976272993241,15.8145141125734,19.3479963326193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.632022241256357,1.01362607645082,1.54066435747241,1.16928740680016,0.716106782669926,1.19208812868759,0.961563596159751,0.738447635872886,0.807731599585181,1.21930890648,1.41156659191577,0.877120926657772,0.962118416403295,0.233753804363138,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:13152564..13152597,- | |||
}} |
Revision as of 18:44, 13 September 2013
Short description: | p@chr1:13152564..13152597, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:13152564..13152597, - |
Coexpression cluster: | MCL_coexpression_mm9:807 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 5.04e-17 | 23 |
neck | 5.04e-17 | 23 |
respiratory system epithelium | 5.04e-17 | 23 |
hemolymphoid system gland | 5.04e-17 | 23 |
pharyngeal epithelium | 5.04e-17 | 23 |
thymic region | 5.04e-17 | 23 |
pharyngeal gland | 5.04e-17 | 23 |
entire pharyngeal arch endoderm | 5.04e-17 | 23 |
thymus primordium | 5.04e-17 | 23 |
early pharyngeal endoderm | 5.04e-17 | 23 |
pharynx | 3.22e-16 | 24 |
gland of gut | 3.22e-16 | 24 |
upper respiratory tract | 3.22e-16 | 24 |
chordate pharynx | 3.22e-16 | 24 |
pharyngeal arch system | 3.22e-16 | 24 |
pharyngeal region of foregut | 3.22e-16 | 24 |
segment of respiratory tract | 3.70e-14 | 27 |
hemolymphoid system | 4.88e-13 | 48 |
immune system | 4.88e-13 | 48 |
hemopoietic organ | 5.07e-13 | 29 |
immune organ | 5.07e-13 | 29 |
hematopoietic system | 2.45e-12 | 45 |
blood island | 2.45e-12 | 45 |
connective tissue | 6.56e-11 | 46 |
mixed endoderm/mesoderm-derived structure | 2.15e-10 | 35 |
craniocervical region | 4.85e-10 | 36 |
respiratory tract | 1.54e-08 | 41 |
respiratory system | 2.79e-08 | 42 |
anterior region of body | 4.90e-08 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.