FFCP PHASE1:Mm9::chr1:135260141..135260158,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=214253|HGNC=|UniProt=A7MCT6|association_with_transcript=0bp_to_ENSMUST00000135222,ENSMUST00000147909,NM_175443,uc007cqg.2,uc007cqh.2,uc011wsa.1_5end|description=CAGE_peak_4_at_Etnk2_5end|id=chr1:135260141..135260158,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,1.30e-08,23;CL:0000337,1.30e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!6.73e-10!22;UBERON:0007499!6.73e-10!22;UBERON:0006925!6.73e-10!22;UBERON:0009497!6.73e-10!22;UBERON:0000015!6.73e-10!22;UBERON:0002423!6.73e-10!22;UBERON:0006235!6.73e-10!22;UBERON:0008835!6.73e-10!22;UBERON:0003894!6.73e-10!22;UBERON:0004161!6.73e-10!22;UBERON:0008836!6.73e-10!22;UBERON:0000991!2.22e-09!18;UBERON:0005564!2.22e-09!18;UBERON:0009854!5.60e-09!23;UBERON:0009856!5.60e-09!23;UBERON:0004176!7.99e-09!17;UBERON:0009196!7.99e-09!17;UBERON:0009117!7.99e-09!17;UBERON:0003135!2.66e-08!15;UBERON:0005172!3.43e-08!49;UBERON:0005173!3.43e-08!49;UBERON:0002417!3.43e-08!49;UBERON:0000916!3.43e-08!49;UBERON:0000473!7.23e-08!14;UBERON:0000466!7.65e-08!79;UBERON:0002365!2.10e-07!25;UBERON:0002330!2.10e-07!25;UBERON:0003101!2.76e-07!16;UBERON:0000079!2.76e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0003135,8.74e-16,15;UBERON:0000473,8.49e-15,14;UBERON:0000991,1.00e-14,18;UBERON:0005564,1.00e-14,18;UBERON:0003101,1.41e-14,16;UBERON:0000079,1.41e-14,16;UBERON:0004176,1.59e-13,17;UBERON:0009196,1.59e-13,17;UBERON:0009117,1.59e-13,17;UBERON:0002107,1.64e-13,22;UBERON:0007499,1.64e-13,22;UBERON:0006925,1.64e-13,22;UBERON:0009497,1.64e-13,22;UBERON:0000015,1.64e-13,22;UBERON:0002423,1.64e-13,22;UBERON:0006235,1.64e-13,22;UBERON:0008835,1.64e-13,22;UBERON:0003894,1.64e-13,22;UBERON:0004161,1.64e-13,22;UBERON:0008836,1.64e-13,22;UBERON:0009854,9.59e-13,23;UBERON:0009856,9.59e-13,23;UBERON:0003133,1.40e-11,24;UBERON:0002365,2.14e-11,25;UBERON:0002330,2.14e-11,25;UBERON:0005156,2.19e-10,26;UBERON:0000990,2.19e-10,26;UBERON:0005256,5.34e-07,45;UBERON:0005172,6.18e-07,49;UBERON:0005173,6.18e-07,49;UBERON:0002417,6.18e-07,49;UBERON:0000916,6.18e-07,49;UBERON:0003886,9.11e-07,38|phase1_expression=0.480446541314382,0.697950815278722,0.454999239389536,0,0.500895729946347,0.671517087647559,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,0.935476191661768,0,0,0.159992422793407,0.45881856213434,0.57423196411502,0,0.646413698057667,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,2.22548106945558,0,3.1691570175309,1.0165335962074,0,0,0,0,0,0,0.103689612308478,0,0,1.71390590642282,2.20868540951614,0,0,0,2.20231761998777,1.0214987046815,1.38245879930619,3.16527090552465,1.28082701043374,2.08365348222704,1.11673199600552,0.56276261003168,0.61119299110724,0.589257170947335,2.13557521198654,1.86399445825301,0,0,0.289864488701678,0.860423876981386,1.3599426674155,2.15881276655127,2.59910566979068,1.79210754838934,0.140444420131752,0,0,0,0,0,0,0,0.649473123033642,0.506719730950197,0,0.5709193985953,0,1.03909497345377,0.520455980298408,0.913396434936424,0.922461989024234,0.904335843315735,0.705532242814229,0.251333182659351,0.494389935468748,0,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0,0,1.49790639404823,0.457500602818626,0.753926112677186,0.695297280769106,1.02286182932132,1.45451631191692,1.1356888414743,0.305518091550949,0.248813941220186,1.26361379216837,0.210441855886474,0.910843100738926,0.459804208866946,0,0.452114453507145,0.408218994907967,0.384341160854549,0.0937017245597288,0.776110112217047,0,0,0.351902248327898,0.219195732427575,0,0,0,1.79130840136644,0,0,0,0.207125772535502,0,0,0.23674473558521,0.393528463494808,0.462801338662135,0,0,0,0,0.32833492815819,0.162137619091711,0,0,0,0.210289948564127,0.411618449517138,0.330418782983798,0.264450566663544,0.213288250535234,0,0.257734922644187,0.403367049246685,0.667134131534611,0.570676878337677,0,0.658795818896044,1.50801125280162,0,0.974820435595601,0,0.216138049874694,0,0.948339504765408,0.114248512609729,0,0.407302655690628,0.387904974335251,0.350679099451593,0.569128834118316,0.590440591918409,0.627994911365499,1.60416313098341,1.48226313543574,0,0.786235980452812,0.449724224769707,0.811440485554012,0.72353147925725,1.78238096246994,1.43848068725405,1.78348749452539,1.64736847912849,10.0637744569148,3.34926852901653,3.43241440426017,3.03094653536534,5.02312757861354,1.92977408545347,0.369506380333209,0.189491411770485,0.325929952884052,0.678980343100753,0,0.502518772325447,0,0.195133647857799,0.472905432318573,0,0.478364305972461,0.163863314715738,0.172684981865896,0,0,0,0,0,0.80275294993896,0.703270119553219,0,0,0,0,0.430846795465598,0.238968797952552,0.222798674082394,0.283076530788832,0.809621403349789,0.584511715822624,0,0,1.27746076687442,0.712262414669021,0.81443479676788,0.164970122972535,0,0,0.302323556964751,0,0.590603785761546,0,1.03371317267288,0.727067458955011,0,0.316036757935816,0,0,0,0,0.646793418913773,0.643011105094777,0.177340233642274,0.535106452806212,0.329098041204242,0.608929898229199,0,0,0,0.16488625294148,0,0.0603129249281559,0,0.164140899745061,0.291480836629851,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0.609958401380546,0.540026704109006,0.627264888043406,0.436725127492355,0.809186078308924,1.1571483801547,0.523511883968059,0.129614973291793,0,1.12738587736838,3.58839710505549,2.97825282822776,1.94451188344048,1.42075805825504,2.02747350588934,3.63807439801837,5.33837977860195,7.86445083192831,2.89900944991207,1.44015003128933,0,0.405450430580328,0,0,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0.680191150845634,0,0.448569283047378,0.167884616364078,0.386379188064381,0,0,0,1.50471631210609,0,0.920650473014354,1.14579102687879,0,2.05524755931193,1.5107877947794,0.675022500231806,2.2516060161211,2.26571204492102,1.55328093525546,0.207574695168353,0.399024873401031,0.512200817262403,0.243106717068294,0.628839487883947,2.02227859295016,0.222246727801615,0.618105171716683,0.962757628775446,0.505394423527595,0,0.377252682772152,0.655490552289177,0.704276676453562,0.34461281373368,0,0.463537303779422,0.964546102318525,0.412085900803307,0.441596760403192,0,0.354951612318675,0.476872379894642,0.581385666529314,0.564656282491984,0.592302255241736,0.182927972872773,0,0.679020569229309,0,0.237270036248348,0.394017929502254,1.22769312950907,0.309873682371932,0.385813221962283,0,0.701794825336225,0,0.191288332068843,0,0|short_description=p4@Etnk2}} | ||
|EntrezGene=214253 | |||
|HGNC= | |||
|UniProt=A7MCT6 | |||
|association_with_transcript=0bp_to_ENSMUST00000135222,ENSMUST00000147909,NM_175443,uc007cqg.2,uc007cqh.2,uc011wsa.1_5end | |||
|description=CAGE_peak_4_at_Etnk2_5end | |||
|id=chr1:135260141..135260158,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.30e-08,23;CL:0000337,1.30e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!6.73e-10!22;UBERON:0007499!6.73e-10!22;UBERON:0006925!6.73e-10!22;UBERON:0009497!6.73e-10!22;UBERON:0000015!6.73e-10!22;UBERON:0002423!6.73e-10!22;UBERON:0006235!6.73e-10!22;UBERON:0008835!6.73e-10!22;UBERON:0003894!6.73e-10!22;UBERON:0004161!6.73e-10!22;UBERON:0008836!6.73e-10!22;UBERON:0000991!2.22e-09!18;UBERON:0005564!2.22e-09!18;UBERON:0009854!5.60e-09!23;UBERON:0009856!5.60e-09!23;UBERON:0004176!7.99e-09!17;UBERON:0009196!7.99e-09!17;UBERON:0009117!7.99e-09!17;UBERON:0003135!2.66e-08!15;UBERON:0005172!3.43e-08!49;UBERON:0005173!3.43e-08!49;UBERON:0002417!3.43e-08!49;UBERON:0000916!3.43e-08!49;UBERON:0000473!7.23e-08!14;UBERON:0000466!7.65e-08!79;UBERON:0002365!2.10e-07!25;UBERON:0002330!2.10e-07!25;UBERON:0003101!2.76e-07!16;UBERON:0000079!2.76e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,8.74e-16,15;UBERON:0000473,8.49e-15,14;UBERON:0000991,1.00e-14,18;UBERON:0005564,1.00e-14,18;UBERON:0003101,1.41e-14,16;UBERON:0000079,1.41e-14,16;UBERON:0004176,1.59e-13,17;UBERON:0009196,1.59e-13,17;UBERON:0009117,1.59e-13,17;UBERON:0002107,1.64e-13,22;UBERON:0007499,1.64e-13,22;UBERON:0006925,1.64e-13,22;UBERON:0009497,1.64e-13,22;UBERON:0000015,1.64e-13,22;UBERON:0002423,1.64e-13,22;UBERON:0006235,1.64e-13,22;UBERON:0008835,1.64e-13,22;UBERON:0003894,1.64e-13,22;UBERON:0004161,1.64e-13,22;UBERON:0008836,1.64e-13,22;UBERON:0009854,9.59e-13,23;UBERON:0009856,9.59e-13,23;UBERON:0003133,1.40e-11,24;UBERON:0002365,2.14e-11,25;UBERON:0002330,2.14e-11,25;UBERON:0005156,2.19e-10,26;UBERON:0000990,2.19e-10,26;UBERON:0005256,5.34e-07,45;UBERON:0005172,6.18e-07,49;UBERON:0005173,6.18e-07,49;UBERON:0002417,6.18e-07,49;UBERON:0000916,6.18e-07,49;UBERON:0003886,9.11e-07,38 | |||
|phase1_expression=0.480446541314382,0.697950815278722,0.454999239389536,0,0.500895729946347,0.671517087647559,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,0.935476191661768,0,0,0.159992422793407,0.45881856213434,0.57423196411502,0,0.646413698057667,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,2.22548106945558,0,3.1691570175309,1.0165335962074,0,0,0,0,0,0,0.103689612308478,0,0,1.71390590642282,2.20868540951614,0,0,0,2.20231761998777,1.0214987046815,1.38245879930619,3.16527090552465,1.28082701043374,2.08365348222704,1.11673199600552,0.56276261003168,0.61119299110724,0.589257170947335,2.13557521198654,1.86399445825301,0,0,0.289864488701678,0.860423876981386,1.3599426674155,2.15881276655127,2.59910566979068,1.79210754838934,0.140444420131752,0,0,0,0,0,0,0,0.649473123033642,0.506719730950197,0,0.5709193985953,0,1.03909497345377,0.520455980298408,0.913396434936424,0.922461989024234,0.904335843315735,0.705532242814229,0.251333182659351,0.494389935468748,0,0,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0,0,1.49790639404823,0.457500602818626,0.753926112677186,0.695297280769106,1.02286182932132,1.45451631191692,1.1356888414743,0.305518091550949,0.248813941220186,1.26361379216837,0.210441855886474,0.910843100738926,0.459804208866946,0,0.452114453507145,0.408218994907967,0.384341160854549,0.0937017245597288,0.776110112217047,0,0,0.351902248327898,0.219195732427575,0,0,0,1.79130840136644,0,0,0,0.207125772535502,0,0,0.23674473558521,0.393528463494808,0.462801338662135,0,0,0,0,0.32833492815819,0.162137619091711,0,0,0,0.210289948564127,0.411618449517138,0.330418782983798,0.264450566663544,0.213288250535234,0,0.257734922644187,0.403367049246685,0.667134131534611,0.570676878337677,0,0.658795818896044,1.50801125280162,0,0.974820435595601,0,0.216138049874694,0,0.948339504765408,0.114248512609729,0,0.407302655690628,0.387904974335251,0.350679099451593,0.569128834118316,0.590440591918409,0.627994911365499,1.60416313098341,1.48226313543574,0,0.786235980452812,0.449724224769707,0.811440485554012,0.72353147925725,1.78238096246994,1.43848068725405,1.78348749452539,1.64736847912849,10.0637744569148,3.34926852901653,3.43241440426017,3.03094653536534,5.02312757861354,1.92977408545347,0.369506380333209,0.189491411770485,0.325929952884052,0.678980343100753,0,0.502518772325447,0,0.195133647857799,0.472905432318573,0,0.478364305972461,0.163863314715738,0.172684981865896,0,0,0,0,0,0.80275294993896,0.703270119553219,0,0,0,0,0.430846795465598,0.238968797952552,0.222798674082394,0.283076530788832,0.809621403349789,0.584511715822624,0,0,1.27746076687442,0.712262414669021,0.81443479676788,0.164970122972535,0,0,0.302323556964751,0,0.590603785761546,0,1.03371317267288,0.727067458955011,0,0.316036757935816,0,0,0,0,0.646793418913773,0.643011105094777,0.177340233642274,0.535106452806212,0.329098041204242,0.608929898229199,0,0,0,0.16488625294148,0,0.0603129249281559,0,0.164140899745061,0.291480836629851,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0.609958401380546,0.540026704109006,0.627264888043406,0.436725127492355,0.809186078308924,1.1571483801547,0.523511883968059,0.129614973291793,0,1.12738587736838,3.58839710505549,2.97825282822776,1.94451188344048,1.42075805825504,2.02747350588934,3.63807439801837,5.33837977860195,7.86445083192831,2.89900944991207,1.44015003128933,0,0.405450430580328,0,0,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0.680191150845634,0,0.448569283047378,0.167884616364078,0.386379188064381,0,0,0,1.50471631210609,0,0.920650473014354,1.14579102687879,0,2.05524755931193,1.5107877947794,0.675022500231806,2.2516060161211,2.26571204492102,1.55328093525546,0.207574695168353,0.399024873401031,0.512200817262403,0.243106717068294,0.628839487883947,2.02227859295016,0.222246727801615,0.618105171716683,0.962757628775446,0.505394423527595,0,0.377252682772152,0.655490552289177,0.704276676453562,0.34461281373368,0,0.463537303779422,0.964546102318525,0.412085900803307,0.441596760403192,0,0.354951612318675,0.476872379894642,0.581385666529314,0.564656282491984,0.592302255241736,0.182927972872773,0,0.679020569229309,0,0.237270036248348,0.394017929502254,1.22769312950907,0.309873682371932,0.385813221962283,0,0.701794825336225,0,0.191288332068843,0,0 | |||
|short_description=p4@Etnk2 | |||
}} |
Revision as of 18:53, 13 September 2013
Short description: | p4@Etnk2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Etnk2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000135222, ENSMUST00000147909, NM_175443, uc007cqg.2, uc007cqh.2, uc011wsa.1_5end |
EntrezGene: | Etnk2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.30e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.30e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 8.74e-16 | 15 |
testis | 8.49e-15 | 14 |
gonad | 1.00e-14 | 18 |
gonad primordium | 1.00e-14 | 18 |
male organism | 1.41e-14 | 16 |
male reproductive system | 1.41e-14 | 16 |
external genitalia | 1.59e-13 | 17 |
indifferent external genitalia | 1.59e-13 | 17 |
indifferent gonad | 1.59e-13 | 17 |
liver | 1.64e-13 | 22 |
epithelial sac | 1.64e-13 | 22 |
digestive gland | 1.64e-13 | 22 |
epithelium of foregut-midgut junction | 1.64e-13 | 22 |
anatomical boundary | 1.64e-13 | 22 |
hepatobiliary system | 1.64e-13 | 22 |
foregut-midgut junction | 1.64e-13 | 22 |
hepatic diverticulum | 1.64e-13 | 22 |
liver primordium | 1.64e-13 | 22 |
septum transversum | 1.64e-13 | 22 |
liver bud | 1.64e-13 | 22 |
digestive tract diverticulum | 9.59e-13 | 23 |
sac | 9.59e-13 | 23 |
reproductive organ | 1.40e-11 | 24 |
exocrine gland | 2.14e-11 | 25 |
exocrine system | 2.14e-11 | 25 |
reproductive structure | 2.19e-10 | 26 |
reproductive system | 2.19e-10 | 26 |
trunk mesenchyme | 5.34e-07 | 45 |
abdomen element | 6.18e-07 | 49 |
abdominal segment element | 6.18e-07 | 49 |
abdominal segment of trunk | 6.18e-07 | 49 |
abdomen | 6.18e-07 | 49 |
body cavity precursor | 9.11e-07 | 38 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.