FFCP PHASE1:Mm9::chr1:135936996..135937007,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=148|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:135936996..135937007,+|id=chr1:135936996..135937007,+|ontology_enrichment_celltype=CL:0002453!1.59e-07!8|ontology_enrichment_celltype_v019_2=CL:0002453,1.30e-17,8;CL:0000333,4.42e-14,10;CL:0000095,4.42e-14,10;CL:0000243,4.42e-14,10;CL:0000123,4.42e-14,10;CL:0000125,4.42e-14,10;CL:0000030,4.42e-14,10;CL:0000339,4.42e-14,10;CL:0002605,7.08e-13,2;CL:0002604,7.08e-13,2;CL:0000878,7.26e-12,2;CL:0000129,7.26e-12,2;CL:0000128,2.90e-09,6;CL:0000126,2.90e-09,6;CL:0000127,2.90e-09,6;CL:0000192,5.92e-08,3;CL:0000359,5.92e-08,3;CL:0002539,5.92e-08,3;CL:0000514,5.92e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000026!4.44e-08!13;UBERON:0004708!4.44e-08!13;UBERON:0002101!4.44e-08!13;UBERON:0004357!4.44e-08!13;UBERON:0009872!4.44e-08!13;UBERON:0004347!4.44e-08!13;UBERON:0005732!4.44e-08!13;UBERON:0005733!4.44e-08!13;UBERON:0005418!7.81e-07!5;UBERON:0002472!7.81e-07!5;UBERON:0008784!7.81e-07!5;UBERON:0006058!7.81e-07!5;UBERON:0004709!7.81e-07!5;UBERON:0005420!7.81e-07!5;UBERON:0006057!7.81e-07!5;UBERON:0000978!7.81e-07!5;UBERON:0002103!7.81e-07!5;UBERON:0000376!7.81e-07!5;UBERON:0000154!7.81e-07!5;UBERON:0005730!7.81e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0001135,5.92e-08,3;UBERON:0004237,5.92e-08,3;UBERON:0004695,5.92e-08,3;UBERON:0002111,5.92e-08,3;UBERON:0004178,5.92e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,1.31790010585369,0,0,0.65407546914134,6.37089929929968,10.304784650937,0.279972843250725,1.43752564364972,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,1.19840044207362,2.30530983192933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0.433798070759735,0.884610551949874,2.42650274921114,1.76673214768315,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0.611036183101898,2.73695335342205,0.252722758433675,0.210441855886474,0,0,0,0.150704817835715,0.408218994907967,0.2562274405697,0,0,0,0,0.703804496655795,0.43839146485515,0.278047249225598,1.39300866608867,0.823128545631774,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0,0.488894929326078,0.678980343100753,0.234690248288502,0.335012514883631,0,0.390267295715598,0.157635144106191,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0.757412781613119,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0.35613120733451,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0.18006109403131,0,0,0,0.178368817602071,0.493647061806363,0,0,0,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,0.18542530201051,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0.209718688851422,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0.243106717068294,0,0,0.222246727801615,0,0,0,0.50695859978048,0.188626341386076,0,0.256100609619477,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0.685738504770831,0,0.238436189947321,0,0.282328141245992,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0,0.499621155875892,0.233931608445408,1.28922632428979,6.12122662620299,2.8676884485537,2.08681052058379|short_description=p@chr1:135936996..135937007,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=148 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:135936996..135937007,+ | |||
|id=chr1:135936996..135937007,+ | |||
|ontology_enrichment_celltype=CL:0002453!1.59e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.30e-17,8;CL:0000333,4.42e-14,10;CL:0000095,4.42e-14,10;CL:0000243,4.42e-14,10;CL:0000123,4.42e-14,10;CL:0000125,4.42e-14,10;CL:0000030,4.42e-14,10;CL:0000339,4.42e-14,10;CL:0002605,7.08e-13,2;CL:0002604,7.08e-13,2;CL:0000878,7.26e-12,2;CL:0000129,7.26e-12,2;CL:0000128,2.90e-09,6;CL:0000126,2.90e-09,6;CL:0000127,2.90e-09,6;CL:0000192,5.92e-08,3;CL:0000359,5.92e-08,3;CL:0002539,5.92e-08,3;CL:0000514,5.92e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000026!4.44e-08!13;UBERON:0004708!4.44e-08!13;UBERON:0002101!4.44e-08!13;UBERON:0004357!4.44e-08!13;UBERON:0009872!4.44e-08!13;UBERON:0004347!4.44e-08!13;UBERON:0005732!4.44e-08!13;UBERON:0005733!4.44e-08!13;UBERON:0005418!7.81e-07!5;UBERON:0002472!7.81e-07!5;UBERON:0008784!7.81e-07!5;UBERON:0006058!7.81e-07!5;UBERON:0004709!7.81e-07!5;UBERON:0005420!7.81e-07!5;UBERON:0006057!7.81e-07!5;UBERON:0000978!7.81e-07!5;UBERON:0002103!7.81e-07!5;UBERON:0000376!7.81e-07!5;UBERON:0000154!7.81e-07!5;UBERON:0005730!7.81e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,5.92e-08,3;UBERON:0004237,5.92e-08,3;UBERON:0004695,5.92e-08,3;UBERON:0002111,5.92e-08,3;UBERON:0004178,5.92e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,1.31790010585369,0,0,0.65407546914134,6.37089929929968,10.304784650937,0.279972843250725,1.43752564364972,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,1.19840044207362,2.30530983192933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0.433798070759735,0.884610551949874,2.42650274921114,1.76673214768315,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0.611036183101898,2.73695335342205,0.252722758433675,0.210441855886474,0,0,0,0.150704817835715,0.408218994907967,0.2562274405697,0,0,0,0,0.703804496655795,0.43839146485515,0.278047249225598,1.39300866608867,0.823128545631774,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0,0.488894929326078,0.678980343100753,0.234690248288502,0.335012514883631,0,0.390267295715598,0.157635144106191,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0.757412781613119,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0.35613120733451,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0.18006109403131,0,0,0,0.178368817602071,0.493647061806363,0,0,0,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,0.18542530201051,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0.209718688851422,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0.243106717068294,0,0,0.222246727801615,0,0,0,0.50695859978048,0.188626341386076,0,0.256100609619477,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0.685738504770831,0,0.238436189947321,0,0.282328141245992,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0,0.499621155875892,0.233931608445408,1.28922632428979,6.12122662620299,2.8676884485537,2.08681052058379 | |||
|short_description=p@chr1:135936996..135937007,+ | |||
}} |
Revision as of 18:56, 13 September 2013
Short description: | p@chr1:135936996..135937007, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:135936996..135937007, + |
Coexpression cluster: | MCL_coexpression_mm9:148 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.30e-17 | 8 |
migratory neural crest cell | 4.42e-14 | 10 |
neuron associated cell | 4.42e-14 | 10 |
glial cell (sensu Vertebrata) | 4.42e-14 | 10 |
neuron associated cell (sensu Vertebrata) | 4.42e-14 | 10 |
glial cell | 4.42e-14 | 10 |
glioblast | 4.42e-14 | 10 |
glioblast (sensu Vertebrata) | 4.42e-14 | 10 |
astrocyte of the cerebral cortex | 7.08e-13 | 2 |
astrocyte of the hippocampus | 7.08e-13 | 2 |
central nervous system macrophage | 7.26e-12 | 2 |
microglial cell | 7.26e-12 | 2 |
oligodendrocyte | 2.90e-09 | 6 |
macroglial cell | 2.90e-09 | 6 |
astrocyte | 2.90e-09 | 6 |
smooth muscle cell | 5.92e-08 | 3 |
vascular associated smooth muscle cell | 5.92e-08 | 3 |
aortic smooth muscle cell | 5.92e-08 | 3 |
smooth muscle myoblast | 5.92e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 5.92e-08 | 3 |
blood vessel smooth muscle | 5.92e-08 | 3 |
arterial system smooth muscle | 5.92e-08 | 3 |
artery smooth muscle tissue | 5.92e-08 | 3 |
aorta smooth muscle tissue | 5.92e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.