FFCP PHASE1:Mm9::chr1:164501759..164501772,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:164501759..164501772,+|id=chr1:164501759..164501772,+|ontology_enrichment_celltype=CL:0000838!8.68e-18!12;CL:0000542!2.75e-16!13;CL:0000051!2.75e-16!13;CL:0002031!3.44e-16!25;CL:0000988!4.17e-16!32;CL:0002032!4.17e-16!32;CL:0000037!4.17e-16!32;CL:0000566!4.17e-16!32;CL:0000837!4.17e-16!32;CL:0000084!2.00e-15!11;CL:0000827!2.00e-15!11;CL:0000791!6.49e-15!9;CL:0000789!6.49e-15!9;CL:0002420!6.49e-15!9;CL:0002419!6.49e-15!9;CL:0000790!6.49e-15!9;CL:0002320!1.68e-13!46;CL:0000134!1.68e-13!46;CL:0000624!1.83e-12!8;CL:0000219!2.42e-12!54;CL:0000034!3.09e-12!97;CL:0000738!4.71e-12!17;CL:0002087!4.71e-12!17;CL:0000723!5.73e-11!91;CL:0000048!5.73e-11!91;CL:0000144!1.20e-09!121;CL:0000012!1.20e-09!121;CL:0000063!1.99e-09!66;CL:0002371!3.86e-08!118;CL:0000893!8.70e-08!6;CL:0002489!8.70e-08!6;CL:0000898!8.70e-08!6;CL:0000809!8.70e-08!6;CL:0000810!8.70e-08!6;CL:0000895!8.70e-08!6;CL:0000808!8.70e-08!6;CL:0000894!8.70e-08!6;CL:0000806!8.70e-08!6;CL:0000807!8.70e-08!6;CL:0000805!8.70e-08!6;CL:0002425!8.70e-08!6;CL:0002436!8.70e-08!6;CL:0002427!8.70e-08!6;CL:0002428!8.70e-08!6;CL:0002429!8.70e-08!6;CL:0002433!8.70e-08!6;CL:0002431!8.70e-08!6;CL:0002432!8.70e-08!6;CL:0000355!1.51e-07!9;CL:0000553!2.74e-07!6;CL:0000556!2.74e-07!6|ontology_enrichment_celltype_v019_2=CL:0000791,7.18e-33,9;CL:0000789,7.18e-33,9;CL:0002420,7.18e-33,9;CL:0002419,7.18e-33,9;CL:0000790,7.18e-33,9;CL:0000838,5.90e-32,12;CL:0000542,1.87e-29,13;CL:0000051,1.87e-29,13;CL:0000624,3.06e-27,8;CL:0000084,7.85e-27,11;CL:0000827,7.85e-27,11;CL:0000738,2.19e-22,17;CL:0002087,2.19e-22,17;CL:0000893,1.69e-16,6;CL:0002489,1.69e-16,6;CL:0000898,1.69e-16,6;CL:0000809,1.69e-16,6;CL:0000810,1.69e-16,6;CL:0000895,1.69e-16,6;CL:0000808,1.69e-16,6;CL:0000894,1.69e-16,6;CL:0000806,1.69e-16,6;CL:0000807,1.69e-16,6;CL:0000805,1.69e-16,6;CL:0002425,1.69e-16,6;CL:0002436,1.69e-16,6;CL:0002427,1.69e-16,6;CL:0002428,1.69e-16,6;CL:0002429,1.69e-16,6;CL:0002433,1.69e-16,6;CL:0002431,1.69e-16,6;CL:0002432,1.69e-16,6;CL:0002031,5.15e-15,25;CL:0000988,1.42e-11,32;CL:0002032,1.42e-11,32;CL:0000037,1.42e-11,32;CL:0000837,1.42e-11,32;CL:0002320,8.09e-08,46;CL:0000134,8.09e-08,46;CL:0000815,9.86e-08,1;CL:0000792,9.86e-08,1;CL:0000625,1.33e-07,1;CL:0000945,2.05e-07,1;CL:0000236,2.05e-07,1;CL:0000826,2.05e-07,1;CL:0000355,4.50e-07,9;CL:0000723,4.55e-07,91;CL:0000048,4.55e-07,91|ontology_enrichment_disease=DOID:0060100!9.67e-10!3;DOID:4045!9.67e-10!3|ontology_enrichment_disease_v019_2=DOID:0060100,4.00e-20,3;DOID:4045,4.00e-20,3;DOID:0050686,2.32e-10,6|ontology_enrichment_uberon=UBERON:0002384!1.68e-13!46;UBERON:0002329!2.02e-08!11;UBERON:0003077!2.02e-08!11;UBERON:0003059!2.02e-08!11;UBERON:0007282!2.02e-08!11;UBERON:0009618!2.02e-08!11;UBERON:0007285!2.02e-08!11;UBERON:0002204!4.68e-08!32;UBERON:0001134!1.51e-07!9;UBERON:0002036!1.51e-07!9;UBERON:0002385!1.51e-07!9;UBERON:0000486!1.51e-07!9;UBERON:0001015!1.51e-07!9;UBERON:0004290!1.51e-07!9;UBERON:0003082!1.51e-07!9;UBERON:0000383!9.36e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.09e-08,46;UBERON:0001134,4.50e-07,9;UBERON:0002036,4.50e-07,9;UBERON:0002385,4.50e-07,9;UBERON:0000486,4.50e-07,9;UBERON:0007503,4.50e-07,9;UBERON:0001015,4.50e-07,9;UBERON:0002329,4.50e-07,9;UBERON:0003082,4.50e-07,9;UBERON:0003059,4.50e-07,9;UBERON:0007282,4.50e-07,9;UBERON:0004290,4.50e-07,9;UBERON:0009618,4.50e-07,9|phase1_expression=0.160148847104794,0,0,0,0,0,0,6.06879620175408,1.97104211012333,1.17032263160997,0,0,3.25281386869291,3.2345548895029,0.333109761815663,0,0,0.315462165358238,0.274228867211478,0.42438965179803,0.0850432901510698,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0447591376858,5.4693474116666,7.85285615960697,40.58797267414,24.589637458504,7.76816564849846,0,0.101376931219515,0,0,0,0,0,0,0,2.85230430298152,2.17608642603403,3.36093799142464,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:164501759..164501772,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:164501759..164501772,+ | |||
|id=chr1:164501759..164501772,+ | |||
|ontology_enrichment_celltype=CL:0000838!8.68e-18!12;CL:0000542!2.75e-16!13;CL:0000051!2.75e-16!13;CL:0002031!3.44e-16!25;CL:0000988!4.17e-16!32;CL:0002032!4.17e-16!32;CL:0000037!4.17e-16!32;CL:0000566!4.17e-16!32;CL:0000837!4.17e-16!32;CL:0000084!2.00e-15!11;CL:0000827!2.00e-15!11;CL:0000791!6.49e-15!9;CL:0000789!6.49e-15!9;CL:0002420!6.49e-15!9;CL:0002419!6.49e-15!9;CL:0000790!6.49e-15!9;CL:0002320!1.68e-13!46;CL:0000134!1.68e-13!46;CL:0000624!1.83e-12!8;CL:0000219!2.42e-12!54;CL:0000034!3.09e-12!97;CL:0000738!4.71e-12!17;CL:0002087!4.71e-12!17;CL:0000723!5.73e-11!91;CL:0000048!5.73e-11!91;CL:0000144!1.20e-09!121;CL:0000012!1.20e-09!121;CL:0000063!1.99e-09!66;CL:0002371!3.86e-08!118;CL:0000893!8.70e-08!6;CL:0002489!8.70e-08!6;CL:0000898!8.70e-08!6;CL:0000809!8.70e-08!6;CL:0000810!8.70e-08!6;CL:0000895!8.70e-08!6;CL:0000808!8.70e-08!6;CL:0000894!8.70e-08!6;CL:0000806!8.70e-08!6;CL:0000807!8.70e-08!6;CL:0000805!8.70e-08!6;CL:0002425!8.70e-08!6;CL:0002436!8.70e-08!6;CL:0002427!8.70e-08!6;CL:0002428!8.70e-08!6;CL:0002429!8.70e-08!6;CL:0002433!8.70e-08!6;CL:0002431!8.70e-08!6;CL:0002432!8.70e-08!6;CL:0000355!1.51e-07!9;CL:0000553!2.74e-07!6;CL:0000556!2.74e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.18e-33,9;CL:0000789,7.18e-33,9;CL:0002420,7.18e-33,9;CL:0002419,7.18e-33,9;CL:0000790,7.18e-33,9;CL:0000838,5.90e-32,12;CL:0000542,1.87e-29,13;CL:0000051,1.87e-29,13;CL:0000624,3.06e-27,8;CL:0000084,7.85e-27,11;CL:0000827,7.85e-27,11;CL:0000738,2.19e-22,17;CL:0002087,2.19e-22,17;CL:0000893,1.69e-16,6;CL:0002489,1.69e-16,6;CL:0000898,1.69e-16,6;CL:0000809,1.69e-16,6;CL:0000810,1.69e-16,6;CL:0000895,1.69e-16,6;CL:0000808,1.69e-16,6;CL:0000894,1.69e-16,6;CL:0000806,1.69e-16,6;CL:0000807,1.69e-16,6;CL:0000805,1.69e-16,6;CL:0002425,1.69e-16,6;CL:0002436,1.69e-16,6;CL:0002427,1.69e-16,6;CL:0002428,1.69e-16,6;CL:0002429,1.69e-16,6;CL:0002433,1.69e-16,6;CL:0002431,1.69e-16,6;CL:0002432,1.69e-16,6;CL:0002031,5.15e-15,25;CL:0000988,1.42e-11,32;CL:0002032,1.42e-11,32;CL:0000037,1.42e-11,32;CL:0000837,1.42e-11,32;CL:0002320,8.09e-08,46;CL:0000134,8.09e-08,46;CL:0000815,9.86e-08,1;CL:0000792,9.86e-08,1;CL:0000625,1.33e-07,1;CL:0000945,2.05e-07,1;CL:0000236,2.05e-07,1;CL:0000826,2.05e-07,1;CL:0000355,4.50e-07,9;CL:0000723,4.55e-07,91;CL:0000048,4.55e-07,91 | |||
|ontology_enrichment_disease=DOID:0060100!9.67e-10!3;DOID:4045!9.67e-10!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.00e-20,3;DOID:4045,4.00e-20,3;DOID:0050686,2.32e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.68e-13!46;UBERON:0002329!2.02e-08!11;UBERON:0003077!2.02e-08!11;UBERON:0003059!2.02e-08!11;UBERON:0007282!2.02e-08!11;UBERON:0009618!2.02e-08!11;UBERON:0007285!2.02e-08!11;UBERON:0002204!4.68e-08!32;UBERON:0001134!1.51e-07!9;UBERON:0002036!1.51e-07!9;UBERON:0002385!1.51e-07!9;UBERON:0000486!1.51e-07!9;UBERON:0001015!1.51e-07!9;UBERON:0004290!1.51e-07!9;UBERON:0003082!1.51e-07!9;UBERON:0000383!9.36e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.09e-08,46;UBERON:0001134,4.50e-07,9;UBERON:0002036,4.50e-07,9;UBERON:0002385,4.50e-07,9;UBERON:0000486,4.50e-07,9;UBERON:0007503,4.50e-07,9;UBERON:0001015,4.50e-07,9;UBERON:0002329,4.50e-07,9;UBERON:0003082,4.50e-07,9;UBERON:0003059,4.50e-07,9;UBERON:0007282,4.50e-07,9;UBERON:0004290,4.50e-07,9;UBERON:0009618,4.50e-07,9 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,6.06879620175408,1.97104211012333,1.17032263160997,0,0,3.25281386869291,3.2345548895029,0.333109761815663,0,0,0.315462165358238,0.274228867211478,0.42438965179803,0.0850432901510698,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0447591376858,5.4693474116666,7.85285615960697,40.58797267414,24.589637458504,7.76816564849846,0,0.101376931219515,0,0,0,0,0,0,0,2.85230430298152,2.17608642603403,3.36093799142464,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:164501759..164501772,+ | |||
}} |
Revision as of 19:27, 13 September 2013
Short description: | p@chr1:164501759..164501772, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:164501759..164501772, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.09e-08 | 46 |
skeletal muscle tissue | 4.50e-07 | 9 |
striated muscle tissue | 4.50e-07 | 9 |
muscle tissue | 4.50e-07 | 9 |
multilaminar epithelium | 4.50e-07 | 9 |
epithelial vesicle | 4.50e-07 | 9 |
musculature | 4.50e-07 | 9 |
somite | 4.50e-07 | 9 |
myotome | 4.50e-07 | 9 |
presomitic mesoderm | 4.50e-07 | 9 |
presumptive segmental plate | 4.50e-07 | 9 |
dermomyotome | 4.50e-07 | 9 |
trunk paraxial mesoderm | 4.50e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.00e-20 | 3 |
muscle cancer | 4.00e-20 | 3 |
organ system cancer | 2.32e-10 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.