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FFCP PHASE1:Mm9::chr1:179726768..179726779,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=11566|HGNC=|UniProt=P46664|association_with_transcript=-126bp_to_ENSMUST00000016105_5end|description=CAGE_peak_3_at_Adss_5end|id=chr1:179726768..179726779,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,4.14e-10,23;CL:0000337,4.14e-10,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!4.41e-10!34;UBERON:0001049!9.92e-09!52;UBERON:0005068!9.92e-09!52;UBERON:0006241!9.92e-09!52;UBERON:0007135!9.92e-09!52;UBERON:0007811!2.20e-08!86;UBERON:0000153!9.43e-08!94;UBERON:0002791!1.13e-07!29;UBERON:0003528!1.13e-07!29;UBERON:0001893!1.13e-07!29;UBERON:0000064!3.98e-07!99;UBERON:0003056!4.08e-07!49;UBERON:0002346!6.78e-07!71;UBERON:0003075!6.78e-07!71;UBERON:0007284!6.78e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.86e-14,34;UBERON:0001049,6.22e-12,52;UBERON:0005068,6.22e-12,52;UBERON:0006241,6.22e-12,52;UBERON:0007135,6.22e-12,52;UBERON:0000073,7.04e-12,54;UBERON:0002346,1.16e-11,64;UBERON:0003075,1.16e-11,64;UBERON:0007284,1.16e-11,64;UBERON:0003528,2.25e-10,29;UBERON:0002791,2.25e-10,29;UBERON:0001893,2.25e-10,29;UBERON:0010371,6.76e-09,73;UBERON:0000956,1.62e-08,21;UBERON:0001869,1.62e-08,21;UBERON:0000203,1.62e-08,21;UBERON:0003056,2.79e-08,49;UBERON:0001017,3.29e-08,73;UBERON:0002616,4.25e-08,46;UBERON:0002780,8.35e-08,39;UBERON:0001890,8.35e-08,39;UBERON:0006240,8.35e-08,39;UBERON:0000955,9.06e-08,47;UBERON:0006238,9.06e-08,47;UBERON:0001016,9.98e-08,75;UBERON:0003080,1.90e-07,40|phase1_expression=0.640595388419176,3.48975407639361,7.73498706962211,0.60492842261366,1.00179145989269,0.839396359559449,1.86890112476421,0.903863264091034,1.54867594366833,1.40438715793196,0.171217968225505,0.0797721589953364,0.342401459862411,0.524522414513984,0,0.404950534779652,0,0,0,0.84877930359606,3.14660173558958,0.297872853602656,0,1.59992422793407,1.37645568640302,2.8711598205751,2.58457197695445,3.44753972297422,0,0.252030129759931,1.55211357458713,0.635030673459631,0.61506478758457,0,0.288851619751275,0.166234645358492,0.204169356262369,2.09265815368454,3.1253413780952,1.0470474879476,0.588231488031014,1.36609096991689,0.485510353031154,0.377690453926732,0.304130793658544,0.734187008646726,0,0,0,0.388859798148567,0.419959264876088,0,1.00669563634642,1.45072428402269,0.336093799142464,0,0,0,1.61853168687678,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0.384218305321555,2.17748185847803,1.62007125998029,1.68259969081106,1.71390590642282,2.20868540951614,1.5923803897944,1.91690942036473,0,0,1.14918604276669,1.68967186581868,1.58263545276233,2.37867873366265,3.12548022334056,0.558365998002762,0.56276261003168,1.5279824777681,1.76777151284201,2.13557521198654,3.35519002485541,0.151452386666368,0.529000920747499,0,0.860423876981386,2.03991400112325,0,0,0,0.140444420131752,0.681721290312231,0,0.70667914902068,0.422530259330042,0,0,0,3.24736561516821,5.82727690592727,3.0331466700887,0.22836775943812,0,0,0.173485326766136,0,0,0.452167921657868,0.470354828542819,0.251333182659351,0.247194967734374,0,0.884610551949874,0.485300549842228,0.441683036920787,0.484875253135222,0,0.878342391034642,2.09446706813455,0.255457055208591,1.1981512450592,1.79970819298022,2.1601938602421,0.599162557619291,0.915001205637253,3.39266750704734,1.56441888173049,1.79000820131231,0.41557608911912,2.59586020908412,1.73126918545538,0.248813941220186,0,0.210441855886474,0.650602214813519,1.14951052216736,1.26043490863744,0.60281927134286,1.76894897793452,1.2811372028485,1.59292931751539,0.517406741478031,0.862271971731369,0,1.93546236580344,0.219195732427575,1.39023624612799,0.348252166522167,0.411564272815887,0.199034266818493,1.40442637462647,0.772043721344145,3.9782889915383,0.414251545071004,0.469052119962192,0.180062061461015,0.946978942340841,0.196764231747404,0.617068451549513,0.232533944750408,0.268273401399619,0.350296027101508,0.16455984991348,0,0,0,0.658650345873152,0,1.47202963994889,5.24813523134351,0.330418782983798,0.528901133327089,0.213288250535234,0,0,0,0,0.190225626112559,0,0.494096864172033,0.754005626400808,0.795825888164603,0,0,0.432276099749388,0.398282546508734,0.948339504765408,0.228497025219458,0,0.610953983535943,0.193952487167626,0.911765658574141,0.505892296994058,0.295220295959204,0.31399745568275,1.1105744752962,0,0,0.589676985339609,0.449724224769707,0,0,0.25462585178142,0,0.648540907100142,0,0,0,0,0,0.179397413521912,0.482443521363367,0.184753190166605,0.37898282354097,0,0,0.704070744865506,0.670025029767263,0,0.585400943573396,0.315270288212382,0.8858587585951,0.478364305972461,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0.275936746304732,1.60550589987792,1.87538698547525,0.491804836130026,0,0.631016438832513,0.780877488593277,0,0.716906393857656,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0,0.963963949265421,0.709700426041343,0.534196811001766,2.11753047159649,0.329940245945071,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0.632073515871632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|EntrezGene=11566
|HGNC=
|UniProt=P46664
|association_with_transcript=-126bp_to_ENSMUST00000016105_5end
|description=CAGE_peak_3_at_Adss_5end
|id=chr1:179726768..179726779,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000117,4.14e-10,23;CL:0000337,4.14e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!4.41e-10!34;UBERON:0001049!9.92e-09!52;UBERON:0005068!9.92e-09!52;UBERON:0006241!9.92e-09!52;UBERON:0007135!9.92e-09!52;UBERON:0007811!2.20e-08!86;UBERON:0000153!9.43e-08!94;UBERON:0002791!1.13e-07!29;UBERON:0003528!1.13e-07!29;UBERON:0001893!1.13e-07!29;UBERON:0000064!3.98e-07!99;UBERON:0003056!4.08e-07!49;UBERON:0002346!6.78e-07!71;UBERON:0003075!6.78e-07!71;UBERON:0007284!6.78e-07!71
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.86e-14,34;UBERON:0001049,6.22e-12,52;UBERON:0005068,6.22e-12,52;UBERON:0006241,6.22e-12,52;UBERON:0007135,6.22e-12,52;UBERON:0000073,7.04e-12,54;UBERON:0002346,1.16e-11,64;UBERON:0003075,1.16e-11,64;UBERON:0007284,1.16e-11,64;UBERON:0003528,2.25e-10,29;UBERON:0002791,2.25e-10,29;UBERON:0001893,2.25e-10,29;UBERON:0010371,6.76e-09,73;UBERON:0000956,1.62e-08,21;UBERON:0001869,1.62e-08,21;UBERON:0000203,1.62e-08,21;UBERON:0003056,2.79e-08,49;UBERON:0001017,3.29e-08,73;UBERON:0002616,4.25e-08,46;UBERON:0002780,8.35e-08,39;UBERON:0001890,8.35e-08,39;UBERON:0006240,8.35e-08,39;UBERON:0000955,9.06e-08,47;UBERON:0006238,9.06e-08,47;UBERON:0001016,9.98e-08,75;UBERON:0003080,1.90e-07,40
|phase1_expression=0.640595388419176,3.48975407639361,7.73498706962211,0.60492842261366,1.00179145989269,0.839396359559449,1.86890112476421,0.903863264091034,1.54867594366833,1.40438715793196,0.171217968225505,0.0797721589953364,0.342401459862411,0.524522414513984,0,0.404950534779652,0,0,0,0.84877930359606,3.14660173558958,0.297872853602656,0,1.59992422793407,1.37645568640302,2.8711598205751,2.58457197695445,3.44753972297422,0,0.252030129759931,1.55211357458713,0.635030673459631,0.61506478758457,0,0.288851619751275,0.166234645358492,0.204169356262369,2.09265815368454,3.1253413780952,1.0470474879476,0.588231488031014,1.36609096991689,0.485510353031154,0.377690453926732,0.304130793658544,0.734187008646726,0,0,0,0.388859798148567,0.419959264876088,0,1.00669563634642,1.45072428402269,0.336093799142464,0,0,0,1.61853168687678,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0.384218305321555,2.17748185847803,1.62007125998029,1.68259969081106,1.71390590642282,2.20868540951614,1.5923803897944,1.91690942036473,0,0,1.14918604276669,1.68967186581868,1.58263545276233,2.37867873366265,3.12548022334056,0.558365998002762,0.56276261003168,1.5279824777681,1.76777151284201,2.13557521198654,3.35519002485541,0.151452386666368,0.529000920747499,0,0.860423876981386,2.03991400112325,0,0,0,0.140444420131752,0.681721290312231,0,0.70667914902068,0.422530259330042,0,0,0,3.24736561516821,5.82727690592727,3.0331466700887,0.22836775943812,0,0,0.173485326766136,0,0,0.452167921657868,0.470354828542819,0.251333182659351,0.247194967734374,0,0.884610551949874,0.485300549842228,0.441683036920787,0.484875253135222,0,0.878342391034642,2.09446706813455,0.255457055208591,1.1981512450592,1.79970819298022,2.1601938602421,0.599162557619291,0.915001205637253,3.39266750704734,1.56441888173049,1.79000820131231,0.41557608911912,2.59586020908412,1.73126918545538,0.248813941220186,0,0.210441855886474,0.650602214813519,1.14951052216736,1.26043490863744,0.60281927134286,1.76894897793452,1.2811372028485,1.59292931751539,0.517406741478031,0.862271971731369,0,1.93546236580344,0.219195732427575,1.39023624612799,0.348252166522167,0.411564272815887,0.199034266818493,1.40442637462647,0.772043721344145,3.9782889915383,0.414251545071004,0.469052119962192,0.180062061461015,0.946978942340841,0.196764231747404,0.617068451549513,0.232533944750408,0.268273401399619,0.350296027101508,0.16455984991348,0,0,0,0.658650345873152,0,1.47202963994889,5.24813523134351,0.330418782983798,0.528901133327089,0.213288250535234,0,0,0,0,0.190225626112559,0,0.494096864172033,0.754005626400808,0.795825888164603,0,0,0.432276099749388,0.398282546508734,0.948339504765408,0.228497025219458,0,0.610953983535943,0.193952487167626,0.911765658574141,0.505892296994058,0.295220295959204,0.31399745568275,1.1105744752962,0,0,0.589676985339609,0.449724224769707,0,0,0.25462585178142,0,0.648540907100142,0,0,0,0,0,0.179397413521912,0.482443521363367,0.184753190166605,0.37898282354097,0,0,0.704070744865506,0.670025029767263,0,0.585400943573396,0.315270288212382,0.8858587585951,0.478364305972461,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0.275936746304732,1.60550589987792,1.87538698547525,0.491804836130026,0,0.631016438832513,0.780877488593277,0,0.716906393857656,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0,0.963963949265421,0.709700426041343,0.534196811001766,2.11753047159649,0.329940245945071,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0.632073515871632,0,0,0.680879211507576,0.900305470156551,0.646793418913773,0.214337035031592,0,1.07021290561242,0,0.304464949114599,0.23467170806371,0.42366414172764,0.441056796109924,0.65954501176592,0.484393280087717,0.663442174209714,0.477489376012546,0.820704498725306,0.582961673259701,1.8542530201051,0,0.206386867963223,0.555583582109135,0.753473828018764,0.27338845544205,0,1.5298058699447,0.559805809294632,1.65839968565309,0,0.632671987162271,0.203319467126849,0.324016022465404,0.209088296014469,0,0.404593039154462,0.743881101528023,0.26175594198403,0.129614973291793,0,9.01908701894705,1.04661582230785,0.66183396182839,0.583353565032143,0.904118764344118,0.506868376472335,0.821500670520278,0.781226309063701,4.71867049915699,10.6297013163443,10.0810502190253,1.89606672376907,1.21635129174099,0.821687657318618,0.909445760844565,1.43221356533985,0.993406773906324,1.32214994471966,1.18151621739662,1.9183625490148,2.209997392995,0.705783295957884,1.36441033035653,1.05833025804362,1.5193997283604,0.226730383615211,0.665957860122194,0.717710852875806,0.671538465456314,0.19318959403219,0.375364950902364,0,0.214368379079066,0,1.6942555278512,1.38097570952153,1.71868654031819,2.57779773515531,2.05524755931193,3.0215755895588,1.35004500046361,0.900642406448441,0.453142408984205,1.03552062350364,1.03787347584177,0.399024873401031,1.53660245178721,0.972426868273176,0.209613162627982,1.10306105070008,0.44449345560323,0.206035057238894,0.320919209591815,0.758091635291392,0.760437899670719,0.377252682772152,0.655490552289177,0.576226371643824,0.516919220600519,0.952587382566147,0.695305955669133,0.77163688185482,0.412085900803307,0.588795680537589,0.685738504770831,0,0.715308569841963,0.581385666529314,0.376437521661322,0.592302255241736,0.73171189149109,0.789209134313529,0.679020569229309,1.12228454331548,0.830445126869219,1.0835493061312,0.409231043169689,0.619747364743864,1.15743966588685,0.499621155875892,0.701794825336225,0.644613162144895,0.956441660344217,0.661774257358546,0.463735671240843
|short_description=p3@Adss
}}

Revision as of 19:52, 13 September 2013

Short description:p3@Adss
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Adss_5end
Coexpression cluster:NA
Association with transcript: -126bp_to_ENSMUST00000016105_5end
EntrezGene:Adss
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Adss

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.15
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I23.45
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.92
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.36
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.83
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.20
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.16
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F13.39
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C61.77
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E21.94
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.98
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G15.25
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G59.02
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D94.72
testis, neonate N20.CNhs11110.839-18H310.63
testis, neonate N30.CNhs11130.1391-42E210.08
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C41.92
thymus, neonate N07.CNhs11211.713-19D32.21
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A21.36
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.14e-1023
neuroblast (sensu Vertebrata)4.14e-1023

Uber anatomy
Ontology termp-valuen
gray matter2.86e-1434
neural tube6.22e-1252
neural rod6.22e-1252
future spinal cord6.22e-1252
neural keel6.22e-1252
regional part of nervous system7.04e-1254
neurectoderm1.16e-1164
neural plate1.16e-1164
presumptive neural plate1.16e-1164
brain grey matter2.25e-1029
regional part of telencephalon2.25e-1029
telencephalon2.25e-1029
ecto-epithelium6.76e-0973
cerebral cortex1.62e-0821
cerebral hemisphere1.62e-0821
pallium1.62e-0821
pre-chordal neural plate2.79e-0849
central nervous system3.29e-0873
regional part of brain4.25e-0846
regional part of forebrain8.35e-0839
forebrain8.35e-0839
future forebrain8.35e-0839
brain9.06e-0847
future brain9.06e-0847
nervous system9.98e-0875
anterior neural tube1.90e-0740







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