FFCP PHASE1:Mm9::chr1:6720216..6720232,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=240690|HGNC=|MCL_coexpression_id=30|UniProt=|association_with_transcript=0bp_to_ENSMUST00000124167_5end|description=CAGE_peak_1_at_St18_5end|id=chr1:6720216..6720232,+|ontology_enrichment_celltype=CL:0000540!5.45e-13!33;CL:0000047!5.45e-13!33;CL:0000031!5.45e-13!33;CL:0000404!5.45e-13!33;CL:0000117!3.26e-09!23;CL:0000337!3.26e-09!23;CL:0000393!3.46e-09!39;CL:0000211!3.46e-09!39;CL:0002319!9.21e-08!43;CL:0000221!2.40e-07!44;CL:0000133!2.40e-07!44|ontology_enrichment_celltype_v019_2=CL:0000540,4.03e-14,33;CL:0000047,4.03e-14,33;CL:0000031,4.03e-14,33;CL:0000404,4.03e-14,33;CL:0000117,4.30e-11,23;CL:0000337,4.30e-11,23;CL:0000393,6.18e-11,39;CL:0000211,6.18e-11,39;CL:0002319,2.49e-09,43;CL:0000221,5.61e-09,44;CL:0000133,5.61e-09,44;CL:0002609,2.73e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!9.64e-23!71;UBERON:0003075!9.64e-23!71;UBERON:0007284!9.64e-23!71;UBERON:0004121!2.26e-17!102;UBERON:0000924!2.26e-17!102;UBERON:0006601!2.26e-17!102;UBERON:0001017!1.79e-14!73;UBERON:0005743!1.79e-14!73;UBERON:0000073!5.10e-14!75;UBERON:0001016!5.10e-14!75;UBERON:0003056!5.85e-14!49;UBERON:0000033!2.69e-12!63;UBERON:0001049!9.43e-12!52;UBERON:0005068!9.43e-12!52;UBERON:0006241!9.43e-12!52;UBERON:0007135!9.43e-12!52;UBERON:0002616!5.74e-10!49;UBERON:0000955!1.67e-09!50;UBERON:0006238!1.67e-09!50;UBERON:0003080!5.21e-09!40;UBERON:0002780!7.53e-09!39;UBERON:0001890!7.53e-09!39;UBERON:0006240!7.53e-09!39;UBERON:0000970!7.50e-07!9;UBERON:0000019!7.50e-07!9;UBERON:0000047!7.50e-07!9;UBERON:0004088!7.50e-07!9;UBERON:0002104!7.50e-07!9;UBERON:0001456!7.50e-07!9;UBERON:0003072!7.50e-07!9;UBERON:0003071!7.50e-07!9;UBERON:0004128!7.50e-07!9;UBERON:0002342!9.01e-07!10;UBERON:0005062!9.01e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002346,9.99e-24,64;UBERON:0003075,9.99e-24,64;UBERON:0007284,9.99e-24,64;UBERON:0010371,2.80e-19,73;UBERON:0003056,2.57e-18,49;UBERON:0010314,6.86e-18,92;UBERON:0004121,8.62e-18,95;UBERON:0000924,8.62e-18,95;UBERON:0006601,8.62e-18,95;UBERON:0001017,1.16e-15,73;UBERON:0001016,5.98e-15,75;UBERON:0001049,2.42e-13,52;UBERON:0005068,2.42e-13,52;UBERON:0006241,2.42e-13,52;UBERON:0007135,2.42e-13,52;UBERON:0000073,1.55e-12,54;UBERON:0002616,1.73e-12,46;UBERON:0000955,4.64e-12,47;UBERON:0006238,4.64e-12,47;UBERON:0002780,1.09e-11,39;UBERON:0001890,1.09e-11,39;UBERON:0006240,1.09e-11,39;UBERON:0003080,3.14e-11,40;UBERON:0000970,2.02e-09,9;UBERON:0000019,2.02e-09,9;UBERON:0000047,2.02e-09,9;UBERON:0010312,2.02e-09,9;UBERON:0004088,2.02e-09,9;UBERON:0002104,2.02e-09,9;UBERON:0001456,2.02e-09,9;UBERON:0003072,2.02e-09,9;UBERON:0004128,2.02e-09,9;UBERON:0003071,2.02e-09,9;UBERON:0002020,1.64e-08,34;UBERON:0000007,1.03e-07,8;UBERON:0003296,1.03e-07,8;UBERON:0010133,1.03e-07,8;UBERON:0001444,2.37e-07,11;UBERON:0003528,2.40e-07,29;UBERON:0002791,2.40e-07,29;UBERON:0001893,2.40e-07,29|phase1_expression=0,0,0,0,0,2.85394762250213,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0.47997726838022,0,0,0.430761996159075,0.215471232685889,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83243045203437,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,3.83651565541367,1.21505344498522,1.68259969081106,0.285650984403804,0.441737081903227,6.49201235839256,4.31304619582064,1.83843757322004,0,0.893811366596314,0.307213066512487,3.42904348098504,2.47016637726506,3.12548022334056,1.95428099300967,0,1.06958773443767,1.17851434189467,3.41692033917847,1.86399445825301,0,0.0755715601067855,0,0,0,0,0,0,1.12355536105401,0,0.259786004602869,0,0,0,0,0,0,0,0,0.45673551887624,0,3.85949561568544,2.25530924795977,2.13125834818499,0.691846491768175,2.11011696773672,1.64624189989987,0.628332956648377,0,0,0,0,0,0,0,93.9826358407066,60.739544975902,0.255457055208591,0,0,0,0.449371918214468,1.37250180845588,5.6544458450789,0.173824320192276,0,0.41557608911912,0.486723789203273,0,0,0,3.36706969418358,0.130120442962704,2.06911893990126,4.14142898552303,6.32960234910003,8.36848939561333,8.07116437794554,3.37326208415024,10.8655415710387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.99101804543684,8.54108282748061,0.330418782983798,0.528901133327089,0.213288250535234,0.696710015581316,1.41754207454303,1.21010114774006,0.22237804384487,0.760902504450237,0,0.494096864172033,0.502670417600539,0.397912944082302,0.779856348476481,1.79763881730844,0,0.398282546508734,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,1.17211686592203,0,0,3.47059041357882,6.24701990874622,11.4174400798383,0.955875191810208,0.668396022247182,0.566153061577665,1.21443210502468,2.04579100537918,4.74345333535828,0,0,0,0,0,0,2.18502572539483,0,2.45186603682668,0.885905678642318,3.68922177532713,1.80899805217755,3.27180356529755,0.356497378384721,0.632073515871632,0,3.09406629744561,13.2771446243977,0.900305470156551,1.0348694702620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| ||
|EntrezGene=240690 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000124167_5end | |||
|description=CAGE_peak_1_at_St18_5end | |||
|id=chr1:6720216..6720232,+ | |||
|ontology_enrichment_celltype=CL:0000540!5.45e-13!33;CL:0000047!5.45e-13!33;CL:0000031!5.45e-13!33;CL:0000404!5.45e-13!33;CL:0000117!3.26e-09!23;CL:0000337!3.26e-09!23;CL:0000393!3.46e-09!39;CL:0000211!3.46e-09!39;CL:0002319!9.21e-08!43;CL:0000221!2.40e-07!44;CL:0000133!2.40e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.03e-14,33;CL:0000047,4.03e-14,33;CL:0000031,4.03e-14,33;CL:0000404,4.03e-14,33;CL:0000117,4.30e-11,23;CL:0000337,4.30e-11,23;CL:0000393,6.18e-11,39;CL:0000211,6.18e-11,39;CL:0002319,2.49e-09,43;CL:0000221,5.61e-09,44;CL:0000133,5.61e-09,44;CL:0002609,2.73e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!9.64e-23!71;UBERON:0003075!9.64e-23!71;UBERON:0007284!9.64e-23!71;UBERON:0004121!2.26e-17!102;UBERON:0000924!2.26e-17!102;UBERON:0006601!2.26e-17!102;UBERON:0001017!1.79e-14!73;UBERON:0005743!1.79e-14!73;UBERON:0000073!5.10e-14!75;UBERON:0001016!5.10e-14!75;UBERON:0003056!5.85e-14!49;UBERON:0000033!2.69e-12!63;UBERON:0001049!9.43e-12!52;UBERON:0005068!9.43e-12!52;UBERON:0006241!9.43e-12!52;UBERON:0007135!9.43e-12!52;UBERON:0002616!5.74e-10!49;UBERON:0000955!1.67e-09!50;UBERON:0006238!1.67e-09!50;UBERON:0003080!5.21e-09!40;UBERON:0002780!7.53e-09!39;UBERON:0001890!7.53e-09!39;UBERON:0006240!7.53e-09!39;UBERON:0000970!7.50e-07!9;UBERON:0000019!7.50e-07!9;UBERON:0000047!7.50e-07!9;UBERON:0004088!7.50e-07!9;UBERON:0002104!7.50e-07!9;UBERON:0001456!7.50e-07!9;UBERON:0003072!7.50e-07!9;UBERON:0003071!7.50e-07!9;UBERON:0004128!7.50e-07!9;UBERON:0002342!9.01e-07!10;UBERON:0005062!9.01e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,9.99e-24,64;UBERON:0003075,9.99e-24,64;UBERON:0007284,9.99e-24,64;UBERON:0010371,2.80e-19,73;UBERON:0003056,2.57e-18,49;UBERON:0010314,6.86e-18,92;UBERON:0004121,8.62e-18,95;UBERON:0000924,8.62e-18,95;UBERON:0006601,8.62e-18,95;UBERON:0001017,1.16e-15,73;UBERON:0001016,5.98e-15,75;UBERON:0001049,2.42e-13,52;UBERON:0005068,2.42e-13,52;UBERON:0006241,2.42e-13,52;UBERON:0007135,2.42e-13,52;UBERON:0000073,1.55e-12,54;UBERON:0002616,1.73e-12,46;UBERON:0000955,4.64e-12,47;UBERON:0006238,4.64e-12,47;UBERON:0002780,1.09e-11,39;UBERON:0001890,1.09e-11,39;UBERON:0006240,1.09e-11,39;UBERON:0003080,3.14e-11,40;UBERON:0000970,2.02e-09,9;UBERON:0000019,2.02e-09,9;UBERON:0000047,2.02e-09,9;UBERON:0010312,2.02e-09,9;UBERON:0004088,2.02e-09,9;UBERON:0002104,2.02e-09,9;UBERON:0001456,2.02e-09,9;UBERON:0003072,2.02e-09,9;UBERON:0004128,2.02e-09,9;UBERON:0003071,2.02e-09,9;UBERON:0002020,1.64e-08,34;UBERON:0000007,1.03e-07,8;UBERON:0003296,1.03e-07,8;UBERON:0010133,1.03e-07,8;UBERON:0001444,2.37e-07,11;UBERON:0003528,2.40e-07,29;UBERON:0002791,2.40e-07,29;UBERON:0001893,2.40e-07,29 | |||
|phase1_expression=0,0,0,0,0,2.85394762250213,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0.47997726838022,0,0,0.430761996159075,0.215471232685889,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83243045203437,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,3.83651565541367,1.21505344498522,1.68259969081106,0.285650984403804,0.441737081903227,6.49201235839256,4.31304619582064,1.83843757322004,0,0.893811366596314,0.307213066512487,3.42904348098504,2.47016637726506,3.12548022334056,1.95428099300967,0,1.06958773443767,1.17851434189467,3.41692033917847,1.86399445825301,0,0.0755715601067855,0,0,0,0,0,0,1.12355536105401,0,0.259786004602869,0,0,0,0,0,0,0,0,0.45673551887624,0,3.85949561568544,2.25530924795977,2.13125834818499,0.691846491768175,2.11011696773672,1.64624189989987,0.628332956648377,0,0,0,0,0,0,0,93.9826358407066,60.739544975902,0.255457055208591,0,0,0,0.449371918214468,1.37250180845588,5.6544458450789,0.173824320192276,0,0.41557608911912,0.486723789203273,0,0,0,3.36706969418358,0.130120442962704,2.06911893990126,4.14142898552303,6.32960234910003,8.36848939561333,8.07116437794554,3.37326208415024,10.8655415710387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.99101804543684,8.54108282748061,0.330418782983798,0.528901133327089,0.213288250535234,0.696710015581316,1.41754207454303,1.21010114774006,0.22237804384487,0.760902504450237,0,0.494096864172033,0.502670417600539,0.397912944082302,0.779856348476481,1.79763881730844,0,0.398282546508734,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,1.17211686592203,0,0,3.47059041357882,6.24701990874622,11.4174400798383,0.955875191810208,0.668396022247182,0.566153061577665,1.21443210502468,2.04579100537918,4.74345333535828,0,0,0,0,0,0,2.18502572539483,0,2.45186603682668,0.885905678642318,3.68922177532713,1.80899805217755,3.27180356529755,0.356497378384721,0.632073515871632,0,3.09406629744561,13.2771446243977,0.900305470156551,1.03486947026204,2.7863814554107,11.1724347194632,4.45922044005176,4.11372551505302,3.04464949114599,0,0,0,0,0,0,0,0,1.1659233465194,0.18542530201051,0,0,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0.158167996790568,0.406638934253697,0.432021363287205,0.418176592028937,1.52853794622324,0.404593039154462,0.661227645802687,1.04702376793612,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0.755393897389701,0,1.35096360967266,0,0,6.2272408550506,9.97562183502578,5.46347538413229,0.243106717068294,0.838452650511929,0.367687016900028,1.11123363900808,0.824140228955577,0.320919209591815,1.01078884705519,0.760437899670719,0.565879024158229,1.03005658216871,1.40855335290712,0.804096565378586,0.476293691283074,0.811190281613988,0.578727661391115,0.412085900803307,0.735994600671987,0,0.354951612318675,0.476872379894642,1.16277133305863,0.282328141245992,0.507687647350059,0.914639864363863,0.789209134313529,0.543216455383447,0.561142271657738,0.593175090620871,0.394017929502254,0.409231043169689,0.929621047115796,0.771626443924566,0.999242311751784,1.40358965067245,0.429742108096597,0,0,0 | |||
|short_description=p1@St18 | |||
}} |
Revision as of 20:47, 13 September 2013
Short description: | p1@St18 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_St18_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 0bp_to_ENSMUST00000124167_5end |
EntrezGene: | St18 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.03e-14 | 33 |
neuronal stem cell | 4.03e-14 | 33 |
neuroblast | 4.03e-14 | 33 |
electrically signaling cell | 4.03e-14 | 33 |
CNS neuron (sensu Vertebrata) | 4.30e-11 | 23 |
neuroblast (sensu Vertebrata) | 4.30e-11 | 23 |
electrically responsive cell | 6.18e-11 | 39 |
electrically active cell | 6.18e-11 | 39 |
neural cell | 2.49e-09 | 43 |
ectodermal cell | 5.61e-09 | 44 |
neurectodermal cell | 5.61e-09 | 44 |
neuron of cerebral cortex | 2.73e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.