FFCP PHASE1:Mm9::chr2:132607437..132607452,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12653|HGNC=|MCL_coexpression_id=1316|UniProt=P16014,E9Q957,Q3TY66|association_with_transcript=423bp_to_ENSMUST00000028826,ENSMUST00000168530,NM_007694,uc008mnf.1_5end|description=CAGE_peak_4_at_Chgb_5end|id=chr2:132607437..132607452,+|ontology_enrichment_celltype=CL:0000540!3.38e-10!33;CL:0000047!3.38e-10!33;CL:0000031!3.38e-10!33;CL:0000404!3.38e-10!33;CL:0000117!1.33e-07!23;CL:0000337!1.33e-07!23;CL:0000393!5.91e-07!39;CL:0000211!5.91e-07!39|ontology_enrichment_celltype_v019_2=CL:0000540,1.77e-08,33;CL:0000047,1.77e-08,33;CL:0000031,1.77e-08,33;CL:0000404,1.77e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!9.50e-31!71;UBERON:0003075!9.50e-31!71;UBERON:0007284!9.50e-31!71;UBERON:0004121!6.74e-27!102;UBERON:0000924!6.74e-27!102;UBERON:0006601!6.74e-27!102;UBERON:0001017!3.21e-25!73;UBERON:0005743!3.21e-25!73;UBERON:0000073!5.53e-25!75;UBERON:0001016!5.53e-25!75;UBERON:0000033!1.20e-22!63;UBERON:0001049!1.59e-21!52;UBERON:0005068!1.59e-21!52;UBERON:0006241!1.59e-21!52;UBERON:0007135!1.59e-21!52;UBERON:0000955!1.16e-20!50;UBERON:0006238!1.16e-20!50;UBERON:0002616!5.80e-20!49;UBERON:0003056!1.46e-19!49;UBERON:0003080!8.24e-17!40;UBERON:0002780!3.79e-16!39;UBERON:0001890!3.79e-16!39;UBERON:0006240!3.79e-16!39;UBERON:0002020!2.51e-14!34;UBERON:0002791!1.01e-11!29;UBERON:0003528!1.01e-11!29;UBERON:0001893!1.01e-11!29;UBERON:0007811!1.00e-10!86;UBERON:0002021!3.05e-09!10;UBERON:0000411!3.05e-09!10;UBERON:0001950!3.05e-09!10;UBERON:0000956!4.23e-08!21;UBERON:0001869!4.23e-08!21;UBERON:0000203!4.23e-08!21;UBERON:0000153!4.28e-08!94;UBERON:0002619!3.41e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.90e-30,64;UBERON:0003075,7.90e-30,64;UBERON:0007284,7.90e-30,64;UBERON:0001017,2.25e-29,73;UBERON:0001016,4.00e-28,75;UBERON:0000073,3.14e-27,54;UBERON:0004121,2.17e-26,95;UBERON:0000924,2.17e-26,95;UBERON:0006601,2.17e-26,95;UBERON:0001049,2.08e-25,52;UBERON:0005068,2.08e-25,52;UBERON:0006241,2.08e-25,52;UBERON:0007135,2.08e-25,52;UBERON:0010371,2.93e-25,73;UBERON:0010314,3.28e-25,92;UBERON:0003056,1.48e-21,49;UBERON:0000955,1.93e-21,47;UBERON:0006238,1.93e-21,47;UBERON:0002616,1.69e-20,46;UBERON:0003080,5.01e-18,40;UBERON:0002780,3.96e-17,39;UBERON:0001890,3.96e-17,39;UBERON:0006240,3.96e-17,39;UBERON:0002020,1.14e-15,34;UBERON:0002021,7.28e-13,10;UBERON:0000411,7.28e-13,10;UBERON:0001950,7.28e-13,10;UBERON:0003528,4.38e-12,29;UBERON:0002791,4.38e-12,29;UBERON:0001893,4.38e-12,29;UBERON:0002619,3.75e-09,17;UBERON:0000956,4.59e-08,21;UBERON:0001869,4.59e-08,21;UBERON:0000203,4.59e-08,21;UBERON:0003076,5.53e-08,12;UBERON:0003057,5.53e-08,12;UBERON:0002369,1.06e-07,7;UBERON:0006858,1.06e-07,7|phase1_expression=1.44133962394315,0,0,0,0,1.6787927191189,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,6.80346321208558,0,0,0.47997726838022,0.45881856213434,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,1.5869729378161,0,0,0,0,0,0,0.299600110518405,0,0.622137673850866,0.540023753326763,0.630974884054146,2.57085885963423,4.8591079009355,0.979926393719632,0.0958454710182364,0,6.60695285996332,16.7270412891596,18.8936035905179,1.84640802822271,0.914876436024097,1.04182674111352,10.3297709630511,9.00420176050688,12.835052813252,6.48182888042069,9.681274294339,3.72798891650601,0.075726193333184,0.151143120213571,0,0,0,0,0,0,1.68533304158102,0,0,0,0.845060518660083,0,0,0,0,0,0,0.34255163915718,0,36.2198819318172,5.20455980298408,10.9607572192371,7.14908041493781,12.3592565253151,15.8744754633201,17.8446559688139,0,0.144599356919912,0,0,0,0,1.86391761218122,30.4492028892009,21.7824575085993,0,0,0,0,17.2259235315546,19.6725259212009,1.88481528169297,51.6258230971061,66.7417343632163,13.2984348518118,21.5780879880118,0.101839363850316,0,0,3.15662783829711,0,0.459804208866946,1.44049703844279,2.71268672104287,2.17716797284249,4.22775276940004,4.02917415606834,11.9003550539947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,62.0355348264175,4.52780294468852,0.660837565967596,0.264450566663544,0,0.696710015581316,0.257734922644187,0,0.444756087689741,0.951128130562796,0,1.15289268306808,0.502670417600539,0.596869416123452,0.974820435595601,0.898819408654221,0.432276099749388,0.398282546508734,0.189667900953082,1.14248512609729,0,0.407302655690628,0,0.280543279561274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,21.0321272884007,21.0981035865966,0,0,0.94652465824877,1.56175497718655,2.15423397732799,0.238968797952552,0.222798674082394,1.13230612315533,1.61924280669958,1.75353514746787,1.97643888973262,17.9939937196212,0,0,0,0,1.32745138339963,0.971122544619926,1.209294227859,1.32023555829129,1.47650946440386,2.45948118355142,3.87642439752332,4.36240475373007,3.92147116223193,0.632073515871632,1.05418608574999,1.03135543248187,93.9613311880455,0.18006109403131,0.258717367565509,1.50035924522115,7.27094957933322,6.59964625127661,7.24015690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| ||
|EntrezGene=12653 | |||
|HGNC= | |||
|MCL_coexpression_id=1316 | |||
|UniProt=P16014,E9Q957,Q3TY66 | |||
|association_with_transcript=423bp_to_ENSMUST00000028826,ENSMUST00000168530,NM_007694,uc008mnf.1_5end | |||
|description=CAGE_peak_4_at_Chgb_5end | |||
|id=chr2:132607437..132607452,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.38e-10!33;CL:0000047!3.38e-10!33;CL:0000031!3.38e-10!33;CL:0000404!3.38e-10!33;CL:0000117!1.33e-07!23;CL:0000337!1.33e-07!23;CL:0000393!5.91e-07!39;CL:0000211!5.91e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.77e-08,33;CL:0000047,1.77e-08,33;CL:0000031,1.77e-08,33;CL:0000404,1.77e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!9.50e-31!71;UBERON:0003075!9.50e-31!71;UBERON:0007284!9.50e-31!71;UBERON:0004121!6.74e-27!102;UBERON:0000924!6.74e-27!102;UBERON:0006601!6.74e-27!102;UBERON:0001017!3.21e-25!73;UBERON:0005743!3.21e-25!73;UBERON:0000073!5.53e-25!75;UBERON:0001016!5.53e-25!75;UBERON:0000033!1.20e-22!63;UBERON:0001049!1.59e-21!52;UBERON:0005068!1.59e-21!52;UBERON:0006241!1.59e-21!52;UBERON:0007135!1.59e-21!52;UBERON:0000955!1.16e-20!50;UBERON:0006238!1.16e-20!50;UBERON:0002616!5.80e-20!49;UBERON:0003056!1.46e-19!49;UBERON:0003080!8.24e-17!40;UBERON:0002780!3.79e-16!39;UBERON:0001890!3.79e-16!39;UBERON:0006240!3.79e-16!39;UBERON:0002020!2.51e-14!34;UBERON:0002791!1.01e-11!29;UBERON:0003528!1.01e-11!29;UBERON:0001893!1.01e-11!29;UBERON:0007811!1.00e-10!86;UBERON:0002021!3.05e-09!10;UBERON:0000411!3.05e-09!10;UBERON:0001950!3.05e-09!10;UBERON:0000956!4.23e-08!21;UBERON:0001869!4.23e-08!21;UBERON:0000203!4.23e-08!21;UBERON:0000153!4.28e-08!94;UBERON:0002619!3.41e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.90e-30,64;UBERON:0003075,7.90e-30,64;UBERON:0007284,7.90e-30,64;UBERON:0001017,2.25e-29,73;UBERON:0001016,4.00e-28,75;UBERON:0000073,3.14e-27,54;UBERON:0004121,2.17e-26,95;UBERON:0000924,2.17e-26,95;UBERON:0006601,2.17e-26,95;UBERON:0001049,2.08e-25,52;UBERON:0005068,2.08e-25,52;UBERON:0006241,2.08e-25,52;UBERON:0007135,2.08e-25,52;UBERON:0010371,2.93e-25,73;UBERON:0010314,3.28e-25,92;UBERON:0003056,1.48e-21,49;UBERON:0000955,1.93e-21,47;UBERON:0006238,1.93e-21,47;UBERON:0002616,1.69e-20,46;UBERON:0003080,5.01e-18,40;UBERON:0002780,3.96e-17,39;UBERON:0001890,3.96e-17,39;UBERON:0006240,3.96e-17,39;UBERON:0002020,1.14e-15,34;UBERON:0002021,7.28e-13,10;UBERON:0000411,7.28e-13,10;UBERON:0001950,7.28e-13,10;UBERON:0003528,4.38e-12,29;UBERON:0002791,4.38e-12,29;UBERON:0001893,4.38e-12,29;UBERON:0002619,3.75e-09,17;UBERON:0000956,4.59e-08,21;UBERON:0001869,4.59e-08,21;UBERON:0000203,4.59e-08,21;UBERON:0003076,5.53e-08,12;UBERON:0003057,5.53e-08,12;UBERON:0002369,1.06e-07,7;UBERON:0006858,1.06e-07,7 | |||
|phase1_expression=1.44133962394315,0,0,0,0,1.6787927191189,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,6.80346321208558,0,0,0.47997726838022,0.45881856213434,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,1.5869729378161,0,0,0,0,0,0,0.299600110518405,0,0.622137673850866,0.540023753326763,0.630974884054146,2.57085885963423,4.8591079009355,0.979926393719632,0.0958454710182364,0,6.60695285996332,16.7270412891596,18.8936035905179,1.84640802822271,0.914876436024097,1.04182674111352,10.3297709630511,9.00420176050688,12.835052813252,6.48182888042069,9.681274294339,3.72798891650601,0.075726193333184,0.151143120213571,0,0,0,0,0,0,1.68533304158102,0,0,0,0.845060518660083,0,0,0,0,0,0,0.34255163915718,0,36.2198819318172,5.20455980298408,10.9607572192371,7.14908041493781,12.3592565253151,15.8744754633201,17.8446559688139,0,0.144599356919912,0,0,0,0,1.86391761218122,30.4492028892009,21.7824575085993,0,0,0,0,17.2259235315546,19.6725259212009,1.88481528169297,51.6258230971061,66.7417343632163,13.2984348518118,21.5780879880118,0.101839363850316,0,0,3.15662783829711,0,0.459804208866946,1.44049703844279,2.71268672104287,2.17716797284249,4.22775276940004,4.02917415606834,11.9003550539947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,62.0355348264175,4.52780294468852,0.660837565967596,0.264450566663544,0,0.696710015581316,0.257734922644187,0,0.444756087689741,0.951128130562796,0,1.15289268306808,0.502670417600539,0.596869416123452,0.974820435595601,0.898819408654221,0.432276099749388,0.398282546508734,0.189667900953082,1.14248512609729,0,0.407302655690628,0,0.280543279561274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,21.0321272884007,21.0981035865966,0,0,0.94652465824877,1.56175497718655,2.15423397732799,0.238968797952552,0.222798674082394,1.13230612315533,1.61924280669958,1.75353514746787,1.97643888973262,17.9939937196212,0,0,0,0,1.32745138339963,0.971122544619926,1.209294227859,1.32023555829129,1.47650946440386,2.45948118355142,3.87642439752332,4.36240475373007,3.92147116223193,0.632073515871632,1.05418608574999,1.03135543248187,93.9613311880455,0.18006109403131,0.258717367565509,1.50035924522115,7.27094957933322,6.59964625127661,7.24015690649332,6.08929898229199,0,0,0.661585194164886,0,0,0,0,0,0.874442509889552,19.4696567111035,0,0,0,0,0,0,0,0,0,0.954670618015114,0.316335993581135,1.82987520414164,0.432021363287205,0,0.218362563746178,0.809186078308924,0.330613822901344,0.785267825952089,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,54.2161768912384,49.7151255427751,48.6961186423487,40.2136446684229,63.0275918188991,61.1869056885657,55.3518450190081,66.6475380771846,67.5182189386465,58.5069152279557,0,0.399024873401031,0.341467211508268,0.486213434136588,0.419226325255965,0.367687016900028,2.44471400581777,0.412070114477788,1.28367683836726,0,1.01391719956096,1.13175804831646,1.03005658216871,0.576226371643824,0.459483751644906,1.90517476513229,0.463537303779422,0.38581844092741,0.824171801606613,0.883193520806384,0.685738504770831,1.06485483695602,0.715308569841963,0.872078499793971,0.470546902076653,0.423073039458382,1.28049581010941,0.526139422875686,0.679020569229309,1.12228454331548,0.830445126869219,0.591026894253381,0.409231043169689,0.77468420592983,0.192906610981141,0.749431733813838,0.701794825336225,0.859484216193193,0.57386499620653,0,0.463735671240843 | |||
|short_description=p4@Chgb | |||
}} |
Revision as of 22:09, 13 September 2013
Short description: | p4@Chgb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Chgb_5end |
Coexpression cluster: | MCL_coexpression_mm9:1316 |
Association with transcript: | 423bp_to_ENSMUST00000028826, ENSMUST00000168530, NM_007694, uc008mnf.1_5end |
EntrezGene: | Chgb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.77e-08 | 33 |
neuronal stem cell | 1.77e-08 | 33 |
neuroblast | 1.77e-08 | 33 |
electrically signaling cell | 1.77e-08 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.