FFCP PHASE1:Mm9::chr2:158436393..158436401,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=392|UniProt=|association_with_transcript=0bp_to_ENSMUST00000145773_5end|description=CAGE_peak_2_at_ENSMUST00000145773_5end|id=chr2:158436393..158436401,-|ontology_enrichment_celltype=CL:0000117!1.59e-27!23;CL:0000337!1.59e-27!23;CL:0000540!1.52e-17!33;CL:0000047!1.52e-17!33;CL:0000031!1.52e-17!33;CL:0000404!1.52e-17!33;CL:0000393!4.93e-14!39;CL:0000211!4.93e-14!39;CL:0002319!3.02e-12!43;CL:0000221!7.49e-12!44;CL:0000133!7.49e-12!44;CL:0002609!1.06e-11!6;CL:0000055!7.97e-10!50;CL:0002608!1.93e-07!3;CL:0000120!2.92e-07!3;CL:0002613!7.16e-07!3|ontology_enrichment_celltype_v019_2=CL:0000117,1.39e-37,23;CL:0000337,1.39e-37,23;CL:0002608,9.07e-28,3;CL:0000120,5.70e-27,3;CL:0000540,4.10e-26,33;CL:0000047,4.10e-26,33;CL:0000031,4.10e-26,33;CL:0000404,4.10e-26,33;CL:0000393,4.79e-22,39;CL:0000211,4.79e-22,39;CL:0002319,5.82e-20,43;CL:0000221,1.69e-19,44;CL:0000133,1.69e-19,44;CL:0002609,3.00e-14,6;CL:0002613,3.16e-12,3;CL:0002321,4.32e-12,70;CL:0000723,3.57e-09,91;CL:0000048,3.57e-09,91;CL:0000034,1.44e-08,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.23e-14!73;UBERON:0005743!6.23e-14!73;UBERON:0000073!2.31e-13!75;UBERON:0001016!2.31e-13!75;UBERON:0002020!1.08e-12!34;UBERON:0000033!1.90e-12!63;UBERON:0001049!2.10e-12!52;UBERON:0005068!2.10e-12!52;UBERON:0006241!2.10e-12!52;UBERON:0007135!2.10e-12!52;UBERON:0002346!9.63e-12!71;UBERON:0003075!9.63e-12!71;UBERON:0007284!9.63e-12!71;UBERON:0004121!1.32e-11!102;UBERON:0000924!1.32e-11!102;UBERON:0006601!1.32e-11!102;UBERON:0000955!2.16e-11!50;UBERON:0006238!2.16e-11!50;UBERON:0002616!2.00e-10!49;UBERON:0003056!2.68e-09!49;UBERON:0002791!2.12e-08!29;UBERON:0003528!2.12e-08!29;UBERON:0001893!2.12e-08!29;UBERON:0002780!1.89e-07!39;UBERON:0001890!1.89e-07!39;UBERON:0006240!1.89e-07!39;UBERON:0007811!1.90e-07!86;UBERON:0003080!3.55e-07!40;UBERON:0003076!4.18e-07!12;UBERON:0003057!4.18e-07!12;UBERON:0001948!6.98e-07!5;UBERON:0002315!6.98e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0001954,2.63e-12,7;UBERON:0003022,2.63e-12,7;UBERON:0002421,2.63e-12,7;UBERON:0000349,2.63e-12,7;UBERON:0002600,2.63e-12,7;UBERON:0001017,1.42e-11,73;UBERON:0001016,2.99e-11,75;UBERON:0002020,3.13e-09,34;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95;UBERON:0000369,1.04e-07,5;UBERON:0002435,1.04e-07,5;UBERON:0000204,1.04e-07,5;UBERON:0010082,1.04e-07,5;UBERON:0003528,1.06e-07,29;UBERON:0002791,1.06e-07,29;UBERON:0001893,1.06e-07,29;UBERON:0000073,1.06e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,1.05798195854407,2.53532561402472,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0.210324961351382,0.856952953211411,0.441737081903227,2.20483438586917,3.73797336971122,5.51531271966013,0,0.127687338085188,1.22885226604995,0.527545150920775,1.00636407962651,1.04182674111352,0,0,0.15279824777681,0,0.854230084794618,1.3047961207771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0,0,0.376963056338593,0,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0.30140963567143,0.544291993210623,0.640568601424249,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0.103787347584177,0.399024873401031,0,0,0.209613162627982,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0.365855945745545,0,0.135804113845862,0,0,0,0.409231043169689,0.309873682371932,0,0.249810577937946,0,0,0,0,0|short_description=p2@ENSMUST00000145773}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=392 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000145773_5end | |||
|description=CAGE_peak_2_at_ENSMUST00000145773_5end | |||
|id=chr2:158436393..158436401,- | |||
|ontology_enrichment_celltype=CL:0000117!1.59e-27!23;CL:0000337!1.59e-27!23;CL:0000540!1.52e-17!33;CL:0000047!1.52e-17!33;CL:0000031!1.52e-17!33;CL:0000404!1.52e-17!33;CL:0000393!4.93e-14!39;CL:0000211!4.93e-14!39;CL:0002319!3.02e-12!43;CL:0000221!7.49e-12!44;CL:0000133!7.49e-12!44;CL:0002609!1.06e-11!6;CL:0000055!7.97e-10!50;CL:0002608!1.93e-07!3;CL:0000120!2.92e-07!3;CL:0002613!7.16e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.39e-37,23;CL:0000337,1.39e-37,23;CL:0002608,9.07e-28,3;CL:0000120,5.70e-27,3;CL:0000540,4.10e-26,33;CL:0000047,4.10e-26,33;CL:0000031,4.10e-26,33;CL:0000404,4.10e-26,33;CL:0000393,4.79e-22,39;CL:0000211,4.79e-22,39;CL:0002319,5.82e-20,43;CL:0000221,1.69e-19,44;CL:0000133,1.69e-19,44;CL:0002609,3.00e-14,6;CL:0002613,3.16e-12,3;CL:0002321,4.32e-12,70;CL:0000723,3.57e-09,91;CL:0000048,3.57e-09,91;CL:0000034,1.44e-08,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.23e-14!73;UBERON:0005743!6.23e-14!73;UBERON:0000073!2.31e-13!75;UBERON:0001016!2.31e-13!75;UBERON:0002020!1.08e-12!34;UBERON:0000033!1.90e-12!63;UBERON:0001049!2.10e-12!52;UBERON:0005068!2.10e-12!52;UBERON:0006241!2.10e-12!52;UBERON:0007135!2.10e-12!52;UBERON:0002346!9.63e-12!71;UBERON:0003075!9.63e-12!71;UBERON:0007284!9.63e-12!71;UBERON:0004121!1.32e-11!102;UBERON:0000924!1.32e-11!102;UBERON:0006601!1.32e-11!102;UBERON:0000955!2.16e-11!50;UBERON:0006238!2.16e-11!50;UBERON:0002616!2.00e-10!49;UBERON:0003056!2.68e-09!49;UBERON:0002791!2.12e-08!29;UBERON:0003528!2.12e-08!29;UBERON:0001893!2.12e-08!29;UBERON:0002780!1.89e-07!39;UBERON:0001890!1.89e-07!39;UBERON:0006240!1.89e-07!39;UBERON:0007811!1.90e-07!86;UBERON:0003080!3.55e-07!40;UBERON:0003076!4.18e-07!12;UBERON:0003057!4.18e-07!12;UBERON:0001948!6.98e-07!5;UBERON:0002315!6.98e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,2.63e-12,7;UBERON:0003022,2.63e-12,7;UBERON:0002421,2.63e-12,7;UBERON:0000349,2.63e-12,7;UBERON:0002600,2.63e-12,7;UBERON:0001017,1.42e-11,73;UBERON:0001016,2.99e-11,75;UBERON:0002020,3.13e-09,34;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95;UBERON:0000369,1.04e-07,5;UBERON:0002435,1.04e-07,5;UBERON:0000204,1.04e-07,5;UBERON:0010082,1.04e-07,5;UBERON:0003528,1.06e-07,29;UBERON:0002791,1.06e-07,29;UBERON:0001893,1.06e-07,29;UBERON:0000073,1.06e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,1.05798195854407,2.53532561402472,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0.210324961351382,0.856952953211411,0.441737081903227,2.20483438586917,3.73797336971122,5.51531271966013,0,0.127687338085188,1.22885226604995,0.527545150920775,1.00636407962651,1.04182674111352,0,0,0.15279824777681,0,0.854230084794618,1.3047961207771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0,0,0.376963056338593,0,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0.30140963567143,0.544291993210623,0.640568601424249,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0.103787347584177,0.399024873401031,0,0,0.209613162627982,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0.365855945745545,0,0.135804113845862,0,0,0,0.409231043169689,0.309873682371932,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p2@ENSMUST00000145773 | |||
}} |
Revision as of 22:42, 13 September 2013
Short description: | p2@ENSMUST00000145773 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000145773_5end |
Coexpression cluster: | MCL_coexpression_mm9:392 |
Association with transcript: | 0bp_to_ENSMUST00000145773_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.39e-37 | 23 |
neuroblast (sensu Vertebrata) | 1.39e-37 | 23 |
hippocampal neuron | 9.07e-28 | 3 |
granule cell | 5.70e-27 | 3 |
neuron | 4.10e-26 | 33 |
neuronal stem cell | 4.10e-26 | 33 |
neuroblast | 4.10e-26 | 33 |
electrically signaling cell | 4.10e-26 | 33 |
electrically responsive cell | 4.79e-22 | 39 |
electrically active cell | 4.79e-22 | 39 |
neural cell | 5.82e-20 | 43 |
ectodermal cell | 1.69e-19 | 44 |
neurectodermal cell | 1.69e-19 | 44 |
neuron of cerebral cortex | 3.00e-14 | 6 |
striatum neuron | 3.16e-12 | 3 |
embryonic cell | 4.32e-12 | 70 |
somatic stem cell | 3.57e-09 | 91 |
multi fate stem cell | 3.57e-09 | 91 |
stem cell | 1.44e-08 | 97 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 2.63e-12 | 7 |
lobe parts of cerebral cortex | 2.63e-12 | 7 |
hippocampal formation | 2.63e-12 | 7 |
limbic system | 2.63e-12 | 7 |
limbic lobe | 2.63e-12 | 7 |
central nervous system | 1.42e-11 | 73 |
nervous system | 2.99e-11 | 75 |
gray matter | 3.13e-09 | 34 |
ectoderm-derived structure | 9.21e-09 | 95 |
ectoderm | 9.21e-09 | 95 |
presumptive ectoderm | 9.21e-09 | 95 |
corpus striatum | 1.04e-07 | 5 |
striatum | 1.04e-07 | 5 |
ventral part of telencephalon | 1.04e-07 | 5 |
future corpus striatum | 1.04e-07 | 5 |
brain grey matter | 1.06e-07 | 29 |
regional part of telencephalon | 1.06e-07 | 29 |
telencephalon | 1.06e-07 | 29 |
regional part of nervous system | 1.06e-07 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.