FFCP PHASE1:Mm9::chr2:25052262..25052275,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=227612|HGNC=|MCL_coexpression_id=116|UniProt=|association_with_transcript=3bp_to_ENSMUST00000142857_5end|description=CAGE_peak_3_at_A830007P12Rik_5end|id=chr2:25052262..25052275,-|ontology_enrichment_celltype=CL:0002320!3.36e-08!46;CL:0000134!3.36e-08!46|ontology_enrichment_celltype_v019_2=CL:0002320,1.61e-10,46;CL:0000134,1.61e-10,46;CL:0000219,4.46e-09,54;CL:0002031,4.59e-09,25;CL:0000988,3.82e-08,32;CL:0002032,3.82e-08,32;CL:0000037,3.82e-08,32;CL:0000837,3.82e-08,32;CL:0000763,2.98e-07,16;CL:0000839,3.83e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!4.85e-19!70;UBERON:0002390!2.64e-18!45;UBERON:0003061!2.64e-18!45;UBERON:0002193!2.76e-18!48;UBERON:0003081!2.15e-13!88;UBERON:0002204!3.35e-11!32;UBERON:0005057!7.22e-11!51;UBERON:0004177!4.32e-10!29;UBERON:0000926!2.15e-09!193;UBERON:0004120!2.15e-09!193;UBERON:0006603!2.15e-09!193;UBERON:0002371!3.05e-09!16;UBERON:0001474!1.94e-08!22;UBERON:0004765!1.94e-08!22;UBERON:0001434!1.94e-08!22;UBERON:0002384!3.36e-08!46;UBERON:0000490!6.15e-08!66;UBERON:0003104!8.70e-08!131;UBERON:0009142!8.70e-08!131;UBERON:0002370!2.89e-07!23;UBERON:0000974!2.89e-07!23;UBERON:0004807!2.89e-07!23;UBERON:0005058!2.89e-07!23;UBERON:0003351!2.89e-07!23;UBERON:0009113!2.89e-07!23;UBERON:0003295!2.89e-07!23;UBERON:0009722!2.89e-07!23;UBERON:0005562!2.89e-07!23;UBERON:0007690!2.89e-07!23;UBERON:0006562!5.23e-07!24;UBERON:0001557!5.23e-07!24;UBERON:0001042!5.23e-07!24;UBERON:0008814!5.23e-07!24;UBERON:0009145!5.23e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.31e-25,45;UBERON:0003061,2.31e-25,45;UBERON:0002193,1.19e-24,48;UBERON:0002405,1.19e-24,48;UBERON:0003081,3.63e-14,87;UBERON:0002204,1.12e-13,32;UBERON:0004177,2.73e-13,29;UBERON:0005057,2.73e-13,29;UBERON:0002371,5.72e-13,16;UBERON:0000077,1.01e-11,35;UBERON:0001474,7.44e-11,22;UBERON:0004765,7.44e-11,22;UBERON:0001434,7.44e-11,22;UBERON:0002384,1.61e-10,46;UBERON:0000926,4.14e-10,120;UBERON:0004120,4.14e-10,120;UBERON:0006603,4.14e-10,120;UBERON:0001041,4.99e-09,80;UBERON:0002370,6.09e-09,23;UBERON:0000974,6.09e-09,23;UBERON:0004807,6.09e-09,23;UBERON:0005058,6.09e-09,23;UBERON:0003351,6.09e-09,23;UBERON:0009113,6.09e-09,23;UBERON:0003295,6.09e-09,23;UBERON:0009722,6.09e-09,23;UBERON:0005562,6.09e-09,23;UBERON:0007690,6.09e-09,23;UBERON:0000490,1.07e-08,66;UBERON:0006562,2.40e-08,24;UBERON:0003408,2.40e-08,24;UBERON:0001557,2.40e-08,24;UBERON:0001042,2.40e-08,24;UBERON:0008814,2.40e-08,24;UBERON:0009145,2.40e-08,24;UBERON:0000065,3.16e-08,41;UBERON:0005911,4.95e-08,69;UBERON:0001004,7.41e-08,42;UBERON:0000072,7.53e-07,27|phase1_expression=0.480446541314382,0.697950815278722,2.27499619694768,0,0,0.33575854382378,0.700837921786577,9.8133725815598,0.84473233291,1.17032263160997,1.02730780935303,1.59544317990673,5.9920255475922,7.69299541287177,2.99798785634096,3.44207954562704,1.39912375625629,5.0473946457318,4.52477630898938,3.81950686618227,0.340173160604279,0.794327609607082,0.783599367416806,0.47997726838022,0.45881856213434,2.29692785646008,0,0.646413698057667,0.190023419456374,0,1.77384408524244,0.635030673459631,0,0,0.288851619751275,0,0,26.3674927364252,17.9707129240474,20.9409497589519,35.2938892818609,43.0318655523821,30.1016418879315,1.1330713617802,0.811015449756117,0.917733760808408,1.56478268869608,0.218025156380447,1.31811709640683,0,0.279972843250725,0,0,2.17608642603403,1.00828139742739,2.05807548828758,1.71920063963254,2.06268836910977,0,0,0.633831403506179,2.37191172448392,1.77858959222228,26.996991518442,34.6103226898441,34.1030455174128,7.19040265244171,4.61061966385865,0.103689612308478,0.135005938331691,0.210324961351382,0.285650984403804,0.662605622854841,0.122490799214954,0.287536413054709,0.919218786610021,0,0.255374676170375,0.46081959976873,0,0.0914876436024097,0.52091337055676,0.279182999001381,0.56276261003168,0.15279824777681,0.294628585473668,0.427115042397309,0.186399445825301,0.075726193333184,0,2.31891590961342,0.860423876981386,0,0,0.649776417447669,0,0.983110940922263,1.36344258062446,1.81850203222008,0.70667914902068,0.14084341977668,2.56652954828636,0,7.11066703153331,0.865964164044856,0.253359865475099,0,0.45673551887624,5.43769555659061,0.890652834388949,0.346970653532272,0,0.691846491768175,0.452167921657868,0.352766121407114,0.628332956648377,0,0.86759614151947,11.4999371753484,0.323533699894818,1.98757366614354,0.969750506270444,0,0.292780797011547,0.209446706813455,0.255457055208591,1.07833612055328,0.599902730993408,0.508280908292259,0.149790639404823,0,0.125654352112864,0,0.255715457330331,0.41557608911912,0.648965052271031,0.81471491080253,1.49288364732112,0.252722758433675,0,0.520481771850815,0,0.180062129805349,0.150704817835715,0.272145996605311,0.384341160854549,0.0937017245597288,0.517406741478031,0.215567992932842,0.378212160335639,0.351902248327898,0.219195732427575,0,0,1.02891068203972,0.199034266818493,0.702213187313235,1.28673953557358,1.42081749697796,0.207125772535502,0.23452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| ||
|EntrezGene=227612 | |||
|HGNC= | |||
|MCL_coexpression_id=116 | |||
|UniProt= | |||
|association_with_transcript=3bp_to_ENSMUST00000142857_5end | |||
|description=CAGE_peak_3_at_A830007P12Rik_5end | |||
|id=chr2:25052262..25052275,- | |||
|ontology_enrichment_celltype=CL:0002320!3.36e-08!46;CL:0000134!3.36e-08!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,1.61e-10,46;CL:0000134,1.61e-10,46;CL:0000219,4.46e-09,54;CL:0002031,4.59e-09,25;CL:0000988,3.82e-08,32;CL:0002032,3.82e-08,32;CL:0000037,3.82e-08,32;CL:0000837,3.82e-08,32;CL:0000763,2.98e-07,16;CL:0000839,3.83e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!4.85e-19!70;UBERON:0002390!2.64e-18!45;UBERON:0003061!2.64e-18!45;UBERON:0002193!2.76e-18!48;UBERON:0003081!2.15e-13!88;UBERON:0002204!3.35e-11!32;UBERON:0005057!7.22e-11!51;UBERON:0004177!4.32e-10!29;UBERON:0000926!2.15e-09!193;UBERON:0004120!2.15e-09!193;UBERON:0006603!2.15e-09!193;UBERON:0002371!3.05e-09!16;UBERON:0001474!1.94e-08!22;UBERON:0004765!1.94e-08!22;UBERON:0001434!1.94e-08!22;UBERON:0002384!3.36e-08!46;UBERON:0000490!6.15e-08!66;UBERON:0003104!8.70e-08!131;UBERON:0009142!8.70e-08!131;UBERON:0002370!2.89e-07!23;UBERON:0000974!2.89e-07!23;UBERON:0004807!2.89e-07!23;UBERON:0005058!2.89e-07!23;UBERON:0003351!2.89e-07!23;UBERON:0009113!2.89e-07!23;UBERON:0003295!2.89e-07!23;UBERON:0009722!2.89e-07!23;UBERON:0005562!2.89e-07!23;UBERON:0007690!2.89e-07!23;UBERON:0006562!5.23e-07!24;UBERON:0001557!5.23e-07!24;UBERON:0001042!5.23e-07!24;UBERON:0008814!5.23e-07!24;UBERON:0009145!5.23e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.31e-25,45;UBERON:0003061,2.31e-25,45;UBERON:0002193,1.19e-24,48;UBERON:0002405,1.19e-24,48;UBERON:0003081,3.63e-14,87;UBERON:0002204,1.12e-13,32;UBERON:0004177,2.73e-13,29;UBERON:0005057,2.73e-13,29;UBERON:0002371,5.72e-13,16;UBERON:0000077,1.01e-11,35;UBERON:0001474,7.44e-11,22;UBERON:0004765,7.44e-11,22;UBERON:0001434,7.44e-11,22;UBERON:0002384,1.61e-10,46;UBERON:0000926,4.14e-10,120;UBERON:0004120,4.14e-10,120;UBERON:0006603,4.14e-10,120;UBERON:0001041,4.99e-09,80;UBERON:0002370,6.09e-09,23;UBERON:0000974,6.09e-09,23;UBERON:0004807,6.09e-09,23;UBERON:0005058,6.09e-09,23;UBERON:0003351,6.09e-09,23;UBERON:0009113,6.09e-09,23;UBERON:0003295,6.09e-09,23;UBERON:0009722,6.09e-09,23;UBERON:0005562,6.09e-09,23;UBERON:0007690,6.09e-09,23;UBERON:0000490,1.07e-08,66;UBERON:0006562,2.40e-08,24;UBERON:0003408,2.40e-08,24;UBERON:0001557,2.40e-08,24;UBERON:0001042,2.40e-08,24;UBERON:0008814,2.40e-08,24;UBERON:0009145,2.40e-08,24;UBERON:0000065,3.16e-08,41;UBERON:0005911,4.95e-08,69;UBERON:0001004,7.41e-08,42;UBERON:0000072,7.53e-07,27 | |||
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| |||
|short_description=p3@A830007P12Rik | |||
}} | |||
Revision as of 23:24, 13 September 2013
| Short description: | p3@A830007P12Rik |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_A830007P12Rik_5end |
| Coexpression cluster: | MCL_coexpression_mm9:116 |
| Association with transcript: | 3bp_to_ENSMUST00000142857_5end |
| EntrezGene: | A830007P12Rik |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| connective tissue cell | 1.61e-10 | 46 |
| mesenchymal cell | 1.61e-10 | 46 |
| motile cell | 4.46e-09 | 54 |
| hematopoietic lineage restricted progenitor cell | 4.59e-09 | 25 |
| hematopoietic cell | 3.82e-08 | 32 |
| hematopoietic oligopotent progenitor cell | 3.82e-08 | 32 |
| hematopoietic stem cell | 3.82e-08 | 32 |
| hematopoietic multipotent progenitor cell | 3.82e-08 | 32 |
| myeloid cell | 2.98e-07 | 16 |
| myeloid lineage restricted progenitor cell | 3.83e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
