FFCP PHASE1:Mm9::chr2:30450557..30450568,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=78617|HGNC=|MCL_coexpression_id=243|UniProt=Q9D245|association_with_transcript=0bp_to_ENSMUST00000102853,NM_030137,uc008jcp.1_5end|description=CAGE_peak_1_at_Cstad_5end|id=chr2:30450557..30450568,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000926,8.11e-07,120;UBERON:0004120,8.11e-07,120;UBERON:0006603,8.11e-07,120|phase1_expression=0.320297694209588,0,0,0,0,0,0,3.61545305636414,1.40788722151667,0.70219357896598,0.34243593645101,0.319088635981346,1.54080656938085,2.18551006047494,0,0.607425802169478,0.699561878128147,2.20823515750766,2.05671650408608,1.69755860719212,1.9559956734746,2.6808556824239,1.82839852397255,0.639969691173627,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,2.26614272356039,2.63580021170738,6.42413632565885,0,0.218025156380447,1.09843091367236,1.36100929351998,0.55994568650145,0,1.34226084846189,2.17608642603403,2.68875039313971,0,2.57880095944881,1.03134418455488,0.202316460859598,0.528990979272033,0,0.338844532069132,0,1.3498495759221,0,0.7104801149461,1.19840044207362,0.768436610643109,0.207379224616955,0.675029691658453,0,0.285650984403804,0.441737081903227,0.734944795289724,0.766763768145891,0,2.20231761998777,2.29837208553338,1.22885226604995,0,0.182975287204819,0.52091337055676,1.11673199600552,2.8138130501584,3.0559649555362,0,0.569486723196412,0.372798891650601,0.302904773332736,0.302286240427142,3.76823835312181,0.860423876981386,0,0,0,0,0.842666520790511,6.13549161281008,2.33807404142582,4.24007489412408,2.25349471642689,11.5493829672886,22.9324715735981,14.2213340630666,0,0,0,0.34255163915718,2.33044095282455,0.593768556259299,2.4287945747259,1.21786191324856,1.38369298353635,1.20578112442098,2.23418543557839,0.879666139307728,0.247194967734374,0.722996784599558,0,1.7794353494215,1.76673214768315,0.969750506270444,0,2.34224637609238,3.97948742945565,0,0.718890747035522,1.19980546198682,0.381210681219194,2.84602214869163,2.74500361691176,1.38219787324151,2.78118912307642,2.04572365864264,1.87009240103604,3.56930778749067,3.66621709861139,2.11491850037158,1.26361379216837,0.420883711772948,1.30120442962704,0.459804208866946,0,1.50704817835715,1.36072998302656,1.40925092313335,1.3118241438362,3.88055056108524,0,0.756424320671277,1.23165786914764,0.43839146485515,0.834141747676794,1.74126083261083,1.02891068203972,2.7864797354589,0,0.257347907114715,0,1.44988040774851,1.17263029990548,1.44049649168812,1.18372367792605,2.16440654922144,1.07986979021165,1.62773761325285,1.3413670069981,3.85325629811659,1.6455984991348,3.11918181750281,3.40489000092594,2.77779976108131,3.07370161407471,2.68412837520744,3.36463917702604,1.02904612379284,1.98251269790279,0.528901133327089,0.426576501070468,0.928946687441754,0.257734922644187,0.605050573870028,0.22237804384487,0,0.474529061544512,0,0.502670417600539,1.79060824837036,0.974820435595601,0,0.432276099749388,0.597423819763102,0.379335801906163,1.37098215131675,2.25415471346161,0.610953983535943,1.35766741017338,2.52488951605147,1.96033265085198,1.77132177575523,1.56998727841375,2.09775178667061,0.296452627087149,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.648540907100142,0.549122826376163,0,1.48856379067401,0.936113019343682,0.252578877947112,0.538192240565737,0.964887042726734,2.03228509183265,0.947457058852424,0.814824882210129,1.18821560042632,0.469380496577004,2.34508760418542,4.52282917683426,4.29294025287157,1.57635144106191,1.99318220683897,2.71073106717728,5.07976275618788,3.62638461918381,1.73578870297814,1.50791283939272,1.08781136763742,0,1.37968373152366,1.60550589987792,2.46144541843627,2.45902418065013,4.29200576247434,0.315508219416257,0,0.215423397732799,0.716906393857656,0.668396022247182,1.69845918473299,0.809621403349789,0.876767573733936,0.395287777946524,1.60660658210904,3.54850213020672,1.95872164033981,3.25773918707152,3.95928295134085,0,0.728341908464944,0.302323556964751,0.188605079755898,0,0.307435147943927,0.516856586336442,1.09060118843252,0.712994756769443,0.316036757935816,0,0,1.36175842301515,0.900305470156551,1.16422815404479,1.07168517515796,1.77340233642274,1.96205699362278,2.13913726782757,2.74018454203139,0,0.21183207086382,0.220528398054962,1.6488625294148,1.77610869365496,1.44751019827574,1.07435109602823,1.14898629821543,1.1659233465194,1.48340241608408,0.854354403989263,0.82554747185289,0.370389054739423,1.13021074202815,1.91371918809435,0.686334519619568,4.41943917984024,3.77868921273877,2.3493995546752,0.954670618015114,0.949007980743406,1.21991680276109,0.540026704109006,0.836353184057875,0.87345025498471,0.674321731924103,0.826534557253359,1.30877970992015,0.90730481304255,1.24267862617385,0,2.24274819065968,1.15820943319968,1.16670713006429,1.03327858782185,1.18269287843545,2.34714477291508,3.1249052362548,1.36317147753424,0.241584120826006,0.864090018773596,1.26404448251271,0.405450430580328,0.410843828659309,0.389762468933385,0.537080087002444,1.58945083825012,2.52410443991935,1.47689527174577,2.01932899896295,2.51482461961499,2.72230699869469,2.43644701849381,2.40529604100824,4.32444538071805,0,0,0,0.167884616364078,2.31827512838629,0.563047426353546,3.47988086107804,1.07184189539533,2.50786052017682,1.6942555278512,4.14292712856459,0.572895513439397,0.859265911718438,0,2.2661816921691,0.675022500231806,1.35096360967266,1.81256963593682,1.03552062350364,0.207574695168353,1.59609949360412,0.170733605754134,0.243106717068294,0.209613162627982,0.367687016900028,0.44449345560323,0.618105171716683,0.962757628775446,1.26348605881899,0,0.943131706930381,1.03005658216871,1.08842759088278,1.20614484806788,0.476293691283074,0.347652977834566,1.15745532278223,0.412085900803307,1.03039244094078,0.342869252385415,0.70990322463735,0.953744759789284,0.581385666529314,0.470546902076653,1.09998990259179,1.09756783723664,1.05227884575137,0.679020569229309,1.12228454331548,0.949080144993393,0.886540341380071,1.22769312950907,0.464810523557898,1.15743966588685,0.499621155875892,1.63752125911786,1.93383948643468,0.956441660344217,1.76473135295612,0.695603506861264|short_description=p1@Cstad}} | ||
|EntrezGene=78617 | |||
|HGNC= | |||
|MCL_coexpression_id=243 | |||
|UniProt=Q9D245 | |||
|association_with_transcript=0bp_to_ENSMUST00000102853,NM_030137,uc008jcp.1_5end | |||
|description=CAGE_peak_1_at_Cstad_5end | |||
|id=chr2:30450557..30450568,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,8.11e-07,120;UBERON:0004120,8.11e-07,120;UBERON:0006603,8.11e-07,120 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,3.61545305636414,1.40788722151667,0.70219357896598,0.34243593645101,0.319088635981346,1.54080656938085,2.18551006047494,0,0.607425802169478,0.699561878128147,2.20823515750766,2.05671650408608,1.69755860719212,1.9559956734746,2.6808556824239,1.82839852397255,0.639969691173627,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,2.26614272356039,2.63580021170738,6.42413632565885,0,0.218025156380447,1.09843091367236,1.36100929351998,0.55994568650145,0,1.34226084846189,2.17608642603403,2.68875039313971,0,2.57880095944881,1.03134418455488,0.202316460859598,0.528990979272033,0,0.338844532069132,0,1.3498495759221,0,0.7104801149461,1.19840044207362,0.768436610643109,0.207379224616955,0.675029691658453,0,0.285650984403804,0.441737081903227,0.734944795289724,0.766763768145891,0,2.20231761998777,2.29837208553338,1.22885226604995,0,0.182975287204819,0.52091337055676,1.11673199600552,2.8138130501584,3.0559649555362,0,0.569486723196412,0.372798891650601,0.302904773332736,0.302286240427142,3.76823835312181,0.860423876981386,0,0,0,0,0.842666520790511,6.13549161281008,2.33807404142582,4.24007489412408,2.25349471642689,11.5493829672886,22.9324715735981,14.2213340630666,0,0,0,0.34255163915718,2.33044095282455,0.593768556259299,2.4287945747259,1.21786191324856,1.38369298353635,1.20578112442098,2.23418543557839,0.879666139307728,0.247194967734374,0.722996784599558,0,1.7794353494215,1.76673214768315,0.969750506270444,0,2.34224637609238,3.97948742945565,0,0.718890747035522,1.19980546198682,0.381210681219194,2.84602214869163,2.74500361691176,1.38219787324151,2.78118912307642,2.04572365864264,1.87009240103604,3.56930778749067,3.66621709861139,2.11491850037158,1.26361379216837,0.420883711772948,1.30120442962704,0.459804208866946,0,1.50704817835715,1.36072998302656,1.40925092313335,1.3118241438362,3.88055056108524,0,0.756424320671277,1.23165786914764,0.43839146485515,0.834141747676794,1.74126083261083,1.02891068203972,2.7864797354589,0,0.257347907114715,0,1.44988040774851,1.17263029990548,1.44049649168812,1.18372367792605,2.16440654922144,1.07986979021165,1.62773761325285,1.3413670069981,3.85325629811659,1.6455984991348,3.11918181750281,3.40489000092594,2.77779976108131,3.07370161407471,2.68412837520744,3.36463917702604,1.02904612379284,1.98251269790279,0.528901133327089,0.426576501070468,0.928946687441754,0.257734922644187,0.605050573870028,0.22237804384487,0,0.474529061544512,0,0.502670417600539,1.79060824837036,0.974820435595601,0,0.432276099749388,0.597423819763102,0.379335801906163,1.37098215131675,2.25415471346161,0.610953983535943,1.35766741017338,2.52488951605147,1.96033265085198,1.77132177575523,1.56998727841375,2.09775178667061,0.296452627087149,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.648540907100142,0.549122826376163,0,1.48856379067401,0.936113019343682,0.252578877947112,0.538192240565737,0.964887042726734,2.03228509183265,0.947457058852424,0.814824882210129,1.18821560042632,0.469380496577004,2.34508760418542,4.52282917683426,4.29294025287157,1.57635144106191,1.99318220683897,2.71073106717728,5.07976275618788,3.62638461918381,1.73578870297814,1.50791283939272,1.08781136763742,0,1.37968373152366,1.60550589987792,2.46144541843627,2.45902418065013,4.29200576247434,0.315508219416257,0,0.215423397732799,0.716906393857656,0.668396022247182,1.69845918473299,0.809621403349789,0.876767573733936,0.395287777946524,1.60660658210904,3.54850213020672,1.95872164033981,3.25773918707152,3.95928295134085,0,0.728341908464944,0.302323556964751,0.188605079755898,0,0.307435147943927,0.516856586336442,1.09060118843252,0.712994756769443,0.316036757935816,0,0,1.36175842301515,0.900305470156551,1.16422815404479,1.07168517515796,1.77340233642274,1.96205699362278,2.13913726782757,2.74018454203139,0,0.21183207086382,0.220528398054962,1.6488625294148,1.77610869365496,1.44751019827574,1.07435109602823,1.14898629821543,1.1659233465194,1.48340241608408,0.854354403989263,0.82554747185289,0.370389054739423,1.13021074202815,1.91371918809435,0.686334519619568,4.41943917984024,3.77868921273877,2.3493995546752,0.954670618015114,0.949007980743406,1.21991680276109,0.540026704109006,0.836353184057875,0.87345025498471,0.674321731924103,0.826534557253359,1.30877970992015,0.90730481304255,1.24267862617385,0,2.24274819065968,1.15820943319968,1.16670713006429,1.03327858782185,1.18269287843545,2.34714477291508,3.1249052362548,1.36317147753424,0.241584120826006,0.864090018773596,1.26404448251271,0.405450430580328,0.410843828659309,0.389762468933385,0.537080087002444,1.58945083825012,2.52410443991935,1.47689527174577,2.01932899896295,2.51482461961499,2.72230699869469,2.43644701849381,2.40529604100824,4.32444538071805,0,0,0,0.167884616364078,2.31827512838629,0.563047426353546,3.47988086107804,1.07184189539533,2.50786052017682,1.6942555278512,4.14292712856459,0.572895513439397,0.859265911718438,0,2.2661816921691,0.675022500231806,1.35096360967266,1.81256963593682,1.03552062350364,0.207574695168353,1.59609949360412,0.170733605754134,0.243106717068294,0.209613162627982,0.367687016900028,0.44449345560323,0.618105171716683,0.962757628775446,1.26348605881899,0,0.943131706930381,1.03005658216871,1.08842759088278,1.20614484806788,0.476293691283074,0.347652977834566,1.15745532278223,0.412085900803307,1.03039244094078,0.342869252385415,0.70990322463735,0.953744759789284,0.581385666529314,0.470546902076653,1.09998990259179,1.09756783723664,1.05227884575137,0.679020569229309,1.12228454331548,0.949080144993393,0.886540341380071,1.22769312950907,0.464810523557898,1.15743966588685,0.499621155875892,1.63752125911786,1.93383948643468,0.956441660344217,1.76473135295612,0.695603506861264 | |||
|short_description=p1@Cstad | |||
}} | |||
Revision as of 23:42, 13 September 2013
| Short description: | p1@Cstad |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Cstad_5end |
| Coexpression cluster: | MCL_coexpression_mm9:243 |
| Association with transcript: | 0bp_to_ENSMUST00000102853, NM_030137, uc008jcp.1_5end |
| EntrezGene: | Cstad |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mesoderm | 8.11e-07 | 120 |
| mesoderm-derived structure | 8.11e-07 | 120 |
| presumptive mesoderm | 8.11e-07 | 120 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
