FFCP PHASE1:Hg19::chr7:18330035..18330050,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9734|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14065|TSSclassifier=S|UniProt=C9IZS0,Q8N879|association_with_transcript=0bp_to_ENST00000413509,ENST00000461159,uc003sua.1_5end|coexpression_cluster_id=C47|description=CAGE_peak_13_at_HDAC9_5end|id=chr7:18330035..18330050,+|ontology_enrichment_celltype=CL:0000037!5.08e-47!172;CL:0000566!5.08e-47!172;CL:0000738!7.59e-43!140;CL:0000988!1.49e-42!182;CL:0002087!1.84e-40!119;CL:0002032!3.35e-40!165;CL:0000837!3.35e-40!165;CL:0002031!3.47e-37!124;CL:0000557!2.72e-26!71;CL:0002009!3.70e-26!65;CL:0000763!1.56e-25!112;CL:0000049!1.56e-25!112;CL:0002194!2.43e-24!63;CL:0000576!2.43e-24!63;CL:0000040!2.43e-24!63;CL:0000559!2.43e-24!63;CL:0000766!7.47e-23!76;CL:0000839!1.90e-22!70;CL:0002057!5.43e-22!42;CL:0000860!9.30e-20!45;CL:0000236!2.85e-13!14;CL:0000542!4.09e-13!53;CL:0000051!4.09e-13!53;CL:0000945!5.21e-13!24;CL:0000826!5.21e-13!24;CL:0000838!1.22e-12!52;CL:0002393!9.78e-12!9;CL:0002397!9.78e-12!9;CL:0000134!1.08e-08!358;CL:0000840!3.80e-08!5;CL:0001029!3.80e-08!5;CL:0002320!4.84e-08!365;CL:0000451!4.15e-07!10|ontology_enrichment_celltype_v019=CL:0000236;9.77e-30;13!CL:0000945;2.18e-27;24!CL:0002393;1.35e-18;6!CL:0002397;1.35e-18;6!CL:0000451;1.99e-13;10!CL:0000840;6.59e-13;5!CL:0000784;6.48e-11;3!CL:0000576;1.75e-10;48!CL:0000875;2.92e-10;3!CL:0002396;2.92e-10;3!CL:0000738;4.38e-10;136!CL:0000226;5.45e-10;3!CL:0000842;5.45e-10;3!CL:0002087;6.17e-09;104!CL:0000990;1.73e-08;8!CL:0000988;8.56e-08;177!CL:0000542;1.04e-07;53!CL:0001014;8.12e-07;2!CL:0001016;8.12e-07;2|ontology_enrichment_celltype_v019_2=CL:0000037,2.92e-37,168;CL:0000988,9.44e-35,177;CL:0000738,1.29e-34,136;CL:0002087,3.20e-32,115;CL:0002031,1.75e-28,120;CL:0000945,8.36e-28,24;CL:0000826,8.36e-28,24;CL:0000236,1.58e-27,14;CL:0002032,3.70e-27,161;CL:0000837,3.70e-27,161;CL:0002393,9.14e-27,9;CL:0002397,9.14e-27,9;CL:0002009,1.66e-20,61;CL:0000557,4.61e-20,67;CL:0002194,1.51e-17,59;CL:0000576,1.51e-17,59;CL:0000040,1.51e-17,59;CL:0000559,1.51e-17,59;CL:0000763,2.82e-16,108;CL:0000049,2.82e-16,108;CL:0000839,3.77e-15,66;CL:0000766,1.81e-13,72;CL:0000451,2.02e-13,10;CL:0000840,6.31e-13,5;CL:0001029,6.31e-13,5;CL:0000134,7.98e-13,354;CL:0002320,2.45e-12,361;CL:0000860,1.85e-11,42;CL:0002057,1.85e-11,42;CL:0000784,7.07e-11,3;CL:0000838,9.26e-11,52;CL:0000219,1.26e-10,386;CL:0000542,1.73e-10,53;CL:0000051,1.73e-10,53;CL:0000875,2.55e-10,3;CL:0002396,2.55e-10,3;CL:0000226,4.48e-10,3;CL:0000842,4.48e-10,3;CL:0000473,1.27e-09,48;CL:0000234,1.27e-09,48;CL:0000034,3.99e-09,441;CL:0000048,1.51e-08,427;CL:0000990,1.68e-08,8;CL:0000723,2.91e-08,433;CL:0001014,8.92e-07,2;CL:0001016,8.92e-07,2|ontology_enrichment_development_v019=CL:0002057;6.66e-08;42!CL:0000051;1.04e-07;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.12e-32!102;UBERON:0003061!2.12e-32!102;UBERON:0002193!9.93e-29!112;UBERON:0002371!8.90e-23!80;UBERON:0001474!4.79e-20!86;UBERON:0007023!1.09e-18!115;UBERON:0002405!1.39e-18!115;UBERON:0004765!9.64e-15!101;UBERON:0001434!9.64e-15!101;UBERON:0003081!3.33e-10!216;UBERON:0002384!7.45e-08!375|ontology_enrichment_uberon_v019=UBERON:0002390;3.10e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.60e-25,98;UBERON:0003061,2.60e-25,98;UBERON:0002193,3.36e-22,108;UBERON:0002371,1.36e-18,76;UBERON:0002405,6.70e-17,93;UBERON:0001474,8.83e-17,82;UBERON:0004765,9.62e-15,90;UBERON:0001434,1.16e-12,100;UBERON:0002384,1.13e-11,371;UBERON:0003081,2.38e-10,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91033514369878,2.70931945184821,1.81034797021462,0.393364276848904,0.383829398097213,0.619264493264304,0,0,0,0.0774672005803016,0,1.17440175733939,1.10799081706375,2.20598892217156,1.08505435357926,1.11957737119962,0.647787332037959,0.515151135268373,0.436194716338694,0,0.242584061187816,0.464858073811369,0.411167888021826,0,0.28769239232215,0,1.18241114944293,0,0,0,0.941211697713023,0,0.224723484445085,0.306083892370903,0.320929027076094,0,0.659702600373432,0.199463657621632,0.852449501065388,0.870627715885752,0.56738522469114,0,0.502497330513487,0.521482918420201,0.65156653411535,0.605399502633369,2.20966581592539,0.632924774881769,3.59133986730301,4.03948169933583,3.56419697364239,4.83013113929929,7.80919842775833,5.46466994770072,3.13514018115373,5.76858363877361,1.46131323011707,12.3197371122926,10.9227722252426,13.3426388079533,10.2415253415962,12.0118796110804,7.47178171940828,12.5598525829124,6.67837628174755,6.83055562931338,1.76171156811282,3.05818582500183,1.32171328579026,1.68152568894461,0.790152254325231,0,0,0,0,0.32592226663359,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0.639933055772092,0,0.236777252044017,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,2.59637914923747,2.96020553408754,0.930705723632056,4.76981248610684,6.29194401858141,7.4291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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9734 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14065 | |||
|TSSclassifier=S | |||
|UniProt=C9IZS0,Q8N879 | |||
|association_with_transcript=0bp_to_ENST00000413509,ENST00000461159,uc003sua.1_5end | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_13_at_HDAC9_5end | |||
|id=chr7:18330035..18330050,+ | |||
|ontology_enrichment_celltype=CL:0000037!5.08e-47!172;CL:0000566!5.08e-47!172;CL:0000738!7.59e-43!140;CL:0000988!1.49e-42!182;CL:0002087!1.84e-40!119;CL:0002032!3.35e-40!165;CL:0000837!3.35e-40!165;CL:0002031!3.47e-37!124;CL:0000557!2.72e-26!71;CL:0002009!3.70e-26!65;CL:0000763!1.56e-25!112;CL:0000049!1.56e-25!112;CL:0002194!2.43e-24!63;CL:0000576!2.43e-24!63;CL:0000040!2.43e-24!63;CL:0000559!2.43e-24!63;CL:0000766!7.47e-23!76;CL:0000839!1.90e-22!70;CL:0002057!5.43e-22!42;CL:0000860!9.30e-20!45;CL:0000236!2.85e-13!14;CL:0000542!4.09e-13!53;CL:0000051!4.09e-13!53;CL:0000945!5.21e-13!24;CL:0000826!5.21e-13!24;CL:0000838!1.22e-12!52;CL:0002393!9.78e-12!9;CL:0002397!9.78e-12!9;CL:0000134!1.08e-08!358;CL:0000840!3.80e-08!5;CL:0001029!3.80e-08!5;CL:0002320!4.84e-08!365;CL:0000451!4.15e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000236;9.77e-30;13!CL:0000945;2.18e-27;24!CL:0002393;1.35e-18;6!CL:0002397;1.35e-18;6!CL:0000451;1.99e-13;10!CL:0000840;6.59e-13;5!CL:0000784;6.48e-11;3!CL:0000576;1.75e-10;48!CL:0000875;2.92e-10;3!CL:0002396;2.92e-10;3!CL:0000738;4.38e-10;136!CL:0000226;5.45e-10;3!CL:0000842;5.45e-10;3!CL:0002087;6.17e-09;104!CL:0000990;1.73e-08;8!CL:0000988;8.56e-08;177!CL:0000542;1.04e-07;53!CL:0001014;8.12e-07;2!CL:0001016;8.12e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.92e-37,168;CL:0000988,9.44e-35,177;CL:0000738,1.29e-34,136;CL:0002087,3.20e-32,115;CL:0002031,1.75e-28,120;CL:0000945,8.36e-28,24;CL:0000826,8.36e-28,24;CL:0000236,1.58e-27,14;CL:0002032,3.70e-27,161;CL:0000837,3.70e-27,161;CL:0002393,9.14e-27,9;CL:0002397,9.14e-27,9;CL:0002009,1.66e-20,61;CL:0000557,4.61e-20,67;CL:0002194,1.51e-17,59;CL:0000576,1.51e-17,59;CL:0000040,1.51e-17,59;CL:0000559,1.51e-17,59;CL:0000763,2.82e-16,108;CL:0000049,2.82e-16,108;CL:0000839,3.77e-15,66;CL:0000766,1.81e-13,72;CL:0000451,2.02e-13,10;CL:0000840,6.31e-13,5;CL:0001029,6.31e-13,5;CL:0000134,7.98e-13,354;CL:0002320,2.45e-12,361;CL:0000860,1.85e-11,42;CL:0002057,1.85e-11,42;CL:0000784,7.07e-11,3;CL:0000838,9.26e-11,52;CL:0000219,1.26e-10,386;CL:0000542,1.73e-10,53;CL:0000051,1.73e-10,53;CL:0000875,2.55e-10,3;CL:0002396,2.55e-10,3;CL:0000226,4.48e-10,3;CL:0000842,4.48e-10,3;CL:0000473,1.27e-09,48;CL:0000234,1.27e-09,48;CL:0000034,3.99e-09,441;CL:0000048,1.51e-08,427;CL:0000990,1.68e-08,8;CL:0000723,2.91e-08,433;CL:0001014,8.92e-07,2;CL:0001016,8.92e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;6.66e-08;42!CL:0000051;1.04e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.12e-32!102;UBERON:0003061!2.12e-32!102;UBERON:0002193!9.93e-29!112;UBERON:0002371!8.90e-23!80;UBERON:0001474!4.79e-20!86;UBERON:0007023!1.09e-18!115;UBERON:0002405!1.39e-18!115;UBERON:0004765!9.64e-15!101;UBERON:0001434!9.64e-15!101;UBERON:0003081!3.33e-10!216;UBERON:0002384!7.45e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0002390;3.10e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.60e-25,98;UBERON:0003061,2.60e-25,98;UBERON:0002193,3.36e-22,108;UBERON:0002371,1.36e-18,76;UBERON:0002405,6.70e-17,93;UBERON:0001474,8.83e-17,82;UBERON:0004765,9.62e-15,90;UBERON:0001434,1.16e-12,100;UBERON:0002384,1.13e-11,371;UBERON:0003081,2.38e-10,203 | |||
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|short_description=p13@HDAC9 | |||
}} |
Revision as of 00:20, 14 September 2013
Short description: | p13@HDAC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_HDAC9_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000413509, ENST00000461159, uc003sua.1_5end |
EntrezGene: | HDAC9 |
HGNC: | 14065 |
UniProt: | C9IZS0Q8N879 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.60e-25 | 98 |
blood island | 2.60e-25 | 98 |
hemolymphoid system | 3.36e-22 | 108 |
bone marrow | 1.36e-18 | 76 |
immune system | 6.70e-17 | 93 |
bone element | 8.83e-17 | 82 |
skeletal element | 9.62e-15 | 90 |
skeletal system | 1.16e-12 | 100 |
connective tissue | 1.13e-11 | 371 |
lateral plate mesoderm | 2.38e-10 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.