FFCP PHASE1:Mm9::chr3:123391603..123391604,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=30|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:123391603..123391604,-|id=chr3:123391603..123391604,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002608,1.59e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!7.87e-10!49;UBERON:0000033!9.28e-10!63;UBERON:0002346!1.69e-09!71;UBERON:0003075!1.69e-09!71;UBERON:0007284!1.69e-09!71;UBERON:0004121!4.40e-09!102;UBERON:0000924!4.40e-09!102;UBERON:0006601!4.40e-09!102;UBERON:0002791!1.82e-08!29;UBERON:0003528!1.82e-08!29;UBERON:0001893!1.82e-08!29;UBERON:0002020!1.84e-08!34;UBERON:0002616!3.91e-08!49;UBERON:0001049!4.00e-08!52;UBERON:0005068!4.00e-08!52;UBERON:0006241!4.00e-08!52;UBERON:0007135!4.00e-08!52;UBERON:0000073!7.37e-08!75;UBERON:0001016!7.37e-08!75;UBERON:0000955!7.57e-08!50;UBERON:0006238!7.57e-08!50;UBERON:0003080!9.44e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.55e-23,4;UBERON:0002680,6.55e-23,4;UBERON:0001895,6.55e-23,4;UBERON:0010092,6.55e-23,4;UBERON:0006215,6.55e-23,4;UBERON:0004733,1.13e-15,6;UBERON:0004732,1.13e-15,6;UBERON:0002028,1.13e-15,6;UBERON:0007277,1.13e-15,6;UBERON:0010313,1.88e-08,3;UBERON:0002342,1.88e-08,3;UBERON:0002005,1.88e-08,3;UBERON:0005428,1.88e-08,3;UBERON:0005062,1.88e-08,3;UBERON:0003076,2.25e-08,12;UBERON:0003057,2.25e-08,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0,0.122490799214954,0.287536413054709,1.83843757322004,0,0,0.153606533256243,0.131886287730194,0.274462930807229,0.52091337055676,0,0.56276261003168,0.15279824777681,0,0.142371680799103,0.186399445825301,0.530083353332288,0.604572480854284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,2.04946557908083,2.51336048176146,0,0,0,0,0.299581278809645,0,0.502617408451458,0.347648640384553,0.255715457330331,0,0,0,0,0,0,0,0.229902104433473,0,0.30140963567143,0.136072998302656,0.384341160854549,0.187403449119458,0.517406741478031,0,0.189106080167819,0,0.219195732427575,0,0,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.411618449517138,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0.898819408654221,0,0,0,0,0,0.203651327845314,0,0,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0.468846746368813,0,0,0,0,1.07711698866399,0,0.222798674082394,0.283076530788832,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0.675022500231806,0.900642406448441,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0.44449345560323,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.231768651889711,0.192909220463705,0,0,0,0.177475806159338,0,0,0.188218760830661,0.169229215783353,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0,0|short_description=p@chr3:123391603..123391604,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:123391603..123391604,- | |||
|id=chr3:123391603..123391604,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002608,1.59e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!7.87e-10!49;UBERON:0000033!9.28e-10!63;UBERON:0002346!1.69e-09!71;UBERON:0003075!1.69e-09!71;UBERON:0007284!1.69e-09!71;UBERON:0004121!4.40e-09!102;UBERON:0000924!4.40e-09!102;UBERON:0006601!4.40e-09!102;UBERON:0002791!1.82e-08!29;UBERON:0003528!1.82e-08!29;UBERON:0001893!1.82e-08!29;UBERON:0002020!1.84e-08!34;UBERON:0002616!3.91e-08!49;UBERON:0001049!4.00e-08!52;UBERON:0005068!4.00e-08!52;UBERON:0006241!4.00e-08!52;UBERON:0007135!4.00e-08!52;UBERON:0000073!7.37e-08!75;UBERON:0001016!7.37e-08!75;UBERON:0000955!7.57e-08!50;UBERON:0006238!7.57e-08!50;UBERON:0003080!9.44e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.55e-23,4;UBERON:0002680,6.55e-23,4;UBERON:0001895,6.55e-23,4;UBERON:0010092,6.55e-23,4;UBERON:0006215,6.55e-23,4;UBERON:0004733,1.13e-15,6;UBERON:0004732,1.13e-15,6;UBERON:0002028,1.13e-15,6;UBERON:0007277,1.13e-15,6;UBERON:0010313,1.88e-08,3;UBERON:0002342,1.88e-08,3;UBERON:0002005,1.88e-08,3;UBERON:0005428,1.88e-08,3;UBERON:0005062,1.88e-08,3;UBERON:0003076,2.25e-08,12;UBERON:0003057,2.25e-08,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0,0.122490799214954,0.287536413054709,1.83843757322004,0,0,0.153606533256243,0.131886287730194,0.274462930807229,0.52091337055676,0,0.56276261003168,0.15279824777681,0,0.142371680799103,0.186399445825301,0.530083353332288,0.604572480854284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,2.04946557908083,2.51336048176146,0,0,0,0,0.299581278809645,0,0.502617408451458,0.347648640384553,0.255715457330331,0,0,0,0,0,0,0,0.229902104433473,0,0.30140963567143,0.136072998302656,0.384341160854549,0.187403449119458,0.517406741478031,0,0.189106080167819,0,0.219195732427575,0,0,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.411618449517138,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0.898819408654221,0,0,0,0,0,0.203651327845314,0,0,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0.468846746368813,0,0,0,0,1.07711698866399,0,0.222798674082394,0.283076530788832,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0.675022500231806,0.900642406448441,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0.44449345560323,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.231768651889711,0.192909220463705,0,0,0,0.177475806159338,0,0,0.188218760830661,0.169229215783353,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr3:123391603..123391604,- | |||
}} |
Revision as of 01:26, 14 September 2013
Short description: | p@chr3:123391603..123391604, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:123391603..123391604, - |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hippocampal neuron | 1.59e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 6.55e-23 | 4 |
regional part of metencephalon | 6.55e-23 | 4 |
metencephalon | 6.55e-23 | 4 |
future metencephalon | 6.55e-23 | 4 |
rhombic lip | 6.55e-23 | 4 |
segmental subdivision of hindbrain | 1.13e-15 | 6 |
segmental subdivision of nervous system | 1.13e-15 | 6 |
hindbrain | 1.13e-15 | 6 |
presumptive hindbrain | 1.13e-15 | 6 |
neural crest-derived structure | 1.88e-08 | 3 |
neural crest | 1.88e-08 | 3 |
enteric nervous system | 1.88e-08 | 3 |
vagal neural crest | 1.88e-08 | 3 |
neural fold | 1.88e-08 | 3 |
posterior neural tube | 2.25e-08 | 12 |
chordal neural plate | 2.25e-08 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.