FFCP PHASE1:Hg19::chr7:89783727..89783738,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26872|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11378|TSSclassifier=S|UniProt=|association_with_transcript=-31bp_to_ENST00000475789_5end|coexpression_cluster_id=C4704|description=CAGE_peak_3_at_STEAP1_5end|id=chr7:89783727..89783738,+|ontology_enrichment_celltype=CL:0000055!7.51e-15!180;CL:0000057!1.36e-08!75;CL:0000680!5.68e-07!57;CL:0000056!5.68e-07!57;CL:0000355!5.68e-07!57|ontology_enrichment_celltype_v019=CL:0002556;9.07e-08;6!CL:0002551;6.40e-07;6!CL:0002552;8.35e-07;5|ontology_enrichment_celltype_v019_2=CL:0002556,2.52e-08,6;CL:0000057,2.41e-07,76;CL:0002551,5.38e-07,6|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2394;7.51e-07;14|ontology_enrichment_disease_v019_2=DOID:2394,4.15e-07,14|ontology_enrichment_uberon=UBERON:0000914!1.96e-09!83;UBERON:0002329!1.96e-09!83;UBERON:0003077!1.96e-09!83;UBERON:0003059!1.96e-09!83;UBERON:0007282!1.96e-09!83;UBERON:0009618!1.96e-09!83;UBERON:0007285!1.96e-09!83;UBERON:0002100!2.10e-09!216;UBERON:0000475!5.14e-08!365;UBERON:0005256!5.71e-08!143;UBERON:0000481!6.73e-08!347;UBERON:0003104!1.82e-07!238;UBERON:0009142!1.82e-07!238;UBERON:0000486!2.42e-07!82;UBERON:0004290!3.22e-07!70|ontology_enrichment_uberon_v019=UBERON:0001758;9.07e-08;6!UBERON:0003672;9.07e-08;6!UBERON:0002346;2.23e-07;4!UBERON:0000923;2.23e-07;4!UBERON:0010316;2.23e-07;4!UBERON:0005291;2.23e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001758,2.52e-08,6;UBERON:0003672,2.52e-08,6;UBERON:0002329,2.55e-07,71;UBERON:0003059,2.55e-07,71;UBERON:0007282,2.55e-07,71;UBERON:0004290,2.55e-07,71;UBERON:0009618,2.55e-07,71;UBERON:0003077,3.99e-07,72;UBERON:0007285,3.99e-07,72;UBERON:0003129,5.35e-07,7;UBERON:0007524,6.17e-07,73;UBERON:0003102,8.25e-07,99|phase1_expression=1.63510541343501,0.856402095563933,0.845726424575827,1.0007329835313,0,0.872338524100369,0,1.26343974685366,1.30592814099919,0.245733936501509,0,0,0,0.866364470720326,1.32558950291166,1.34465029290355,1.20538905604795,0.730310090387373,1.46379839637152,0,0,0,0,0,0,0.687720651731561,0.821005894499457,1.33808328233255,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0,0.722878304769133,1.50401373190767,0.724232594804119,0.795285947051099,0.973269740605272,0.189069634328136,0,0.087834785693126,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,1.13061588384802,0.419499436209906,0,1.04497483268405,0,0,0,0.402829317109147,0.760272105718513,0,0.735326160691737,0,0.982297011124877,1.12264686313085,2.13961812918312,0,0,0.183201743930407,0,0,0,0,0.506522046658319,3.44263870114369,0,0.709336764396714,0,0,0.24666754841716,0.933633106199299,0.538842688278752,0.326923806226917,0,0,0.234321431833797,2.49728061464256,0,2.69007624993242,2.23125547423153,2.91371299862637,2.10676210053373,1.02077085627447,1.10550885580591,2.47981874821837,1.18800285728205,1.23633464639278,0.910161361938026,0,1.34668891163253,1.62654075833553,2.77064115484183,1.31693286264251,1.5324389789951,1.80285670687916,0.453728732640084,0.358779271377724,0.213557388818567,0.423863802319124,2.40072876867522,0.92747276314595,0.515281080091258,0.558350568994769,2.19409231913646,0.779496041289589,0.504867548488229,0.644349290496095,0.646584227275248,0.710019185033229,0.10075209822764,0.339121184620975,0.57978255948989,1.09098448236334,0.573609190778008,0.243947412259191,0.662648841607426,0.464775771478074,0.518305275076852,1.7662459561294,0.36497735907583,1.56449532329816,0,0,1.85747171212792,2.16563844500876,0.236613600079688,0,0.241011029883482,0.220587945464788,0,0.71181185733329,0.134831308160164,0.392442930250692,0,0,0,0,0,1.26755034821831,0.982827216677626,1.18157981336281,0,0.614942192715568,0.343135620597051,0,0,0.904760751704678,1.01847289674383,0,0,0,0.231860809950154,0,0.577465791044295,1.38895653772983,0.570762456703795,0,0,0,0.234004265139238,0.148631162288728,0,0.16798212819886,0.708875486211932,0.447792613514241,0,0,0,0,0,0,0,0.761974731506028,0,0,0,1.23392991243988,0.300343057843917,0.571652865261156,0.112131084345361,0,0.07333828582095,0.258543431515556,0,2.535908257668,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0,0,0,2.60588947434988,0,0.791951872933429,0.904318131178758,0.871533458600294,0.399891964728228,0,0,0,0.239624855491583,2.29723871668228,2.85273810081437,0.723906533337896,2.26023954805422,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,2.50085260529839,0.271265023699736,0.623912584592421,1.07057393278297,1.10391690523754,0.468565659970853,0.902838299183157,2.27407504055985,2.0694614258501,0.664225598535437,0.184369168541703,1.30325421702124,0,0,0,0,0,0,0,0.30239029332968,0.496215615637554,0.61384789315225,0.280660094433074,0.512556597022804,0,0.482561763430822,1.48418066444991,2.158935713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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26872 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11378 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-31bp_to_ENST00000475789_5end | |||
|coexpression_cluster_id=C4704 | |||
|description=CAGE_peak_3_at_STEAP1_5end | |||
|id=chr7:89783727..89783738,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.51e-15!180;CL:0000057!1.36e-08!75;CL:0000680!5.68e-07!57;CL:0000056!5.68e-07!57;CL:0000355!5.68e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002556;9.07e-08;6!CL:0002551;6.40e-07;6!CL:0002552;8.35e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002556,2.52e-08,6;CL:0000057,2.41e-07,76;CL:0002551,5.38e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;7.51e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.15e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.96e-09!83;UBERON:0002329!1.96e-09!83;UBERON:0003077!1.96e-09!83;UBERON:0003059!1.96e-09!83;UBERON:0007282!1.96e-09!83;UBERON:0009618!1.96e-09!83;UBERON:0007285!1.96e-09!83;UBERON:0002100!2.10e-09!216;UBERON:0000475!5.14e-08!365;UBERON:0005256!5.71e-08!143;UBERON:0000481!6.73e-08!347;UBERON:0003104!1.82e-07!238;UBERON:0009142!1.82e-07!238;UBERON:0000486!2.42e-07!82;UBERON:0004290!3.22e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0001758;9.07e-08;6!UBERON:0003672;9.07e-08;6!UBERON:0002346;2.23e-07;4!UBERON:0000923;2.23e-07;4!UBERON:0010316;2.23e-07;4!UBERON:0005291;2.23e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001758,2.52e-08,6;UBERON:0003672,2.52e-08,6;UBERON:0002329,2.55e-07,71;UBERON:0003059,2.55e-07,71;UBERON:0007282,2.55e-07,71;UBERON:0004290,2.55e-07,71;UBERON:0009618,2.55e-07,71;UBERON:0003077,3.99e-07,72;UBERON:0007285,3.99e-07,72;UBERON:0003129,5.35e-07,7;UBERON:0007524,6.17e-07,73;UBERON:0003102,8.25e-07,99 | |||
|phase1_expression=1.63510541343501,0.856402095563933,0.845726424575827,1.0007329835313,0,0.872338524100369,0,1.26343974685366,1.30592814099919,0.245733936501509,0,0,0,0.866364470720326,1.32558950291166,1.34465029290355,1.20538905604795,0.730310090387373,1.46379839637152,0,0,0,0,0,0,0.687720651731561,0.821005894499457,1.33808328233255,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0,0.722878304769133,1.50401373190767,0.724232594804119,0.795285947051099,0.973269740605272,0.189069634328136,0,0.087834785693126,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,1.13061588384802,0.419499436209906,0,1.04497483268405,0,0,0,0.402829317109147,0.760272105718513,0,0.735326160691737,0,0.982297011124877,1.12264686313085,2.13961812918312,0,0,0.183201743930407,0,0,0,0,0.506522046658319,3.44263870114369,0,0.709336764396714,0,0,0.24666754841716,0.933633106199299,0.538842688278752,0.326923806226917,0,0,0.234321431833797,2.49728061464256,0,2.69007624993242,2.23125547423153,2.91371299862637,2.10676210053373,1.02077085627447,1.10550885580591,2.47981874821837,1.18800285728205,1.23633464639278,0.910161361938026,0,1.34668891163253,1.62654075833553,2.77064115484183,1.31693286264251,1.5324389789951,1.80285670687916,0.453728732640084,0.358779271377724,0.213557388818567,0.423863802319124,2.40072876867522,0.92747276314595,0.515281080091258,0.558350568994769,2.19409231913646,0.779496041289589,0.504867548488229,0.644349290496095,0.646584227275248,0.710019185033229,0.10075209822764,0.339121184620975,0.57978255948989,1.09098448236334,0.573609190778008,0.243947412259191,0.662648841607426,0.464775771478074,0.518305275076852,1.7662459561294,0.36497735907583,1.56449532329816,0,0,1.85747171212792,2.16563844500876,0.236613600079688,0,0.241011029883482,0.220587945464788,0,0.71181185733329,0.134831308160164,0.392442930250692,0,0,0,0,0,1.26755034821831,0.982827216677626,1.18157981336281,0,0.614942192715568,0.343135620597051,0,0,0.904760751704678,1.01847289674383,0,0,0,0.231860809950154,0,0.577465791044295,1.38895653772983,0.570762456703795,0,0,0,0.234004265139238,0.148631162288728,0,0.16798212819886,0.708875486211932,0.447792613514241,0,0,0,0,0,0,0,0.761974731506028,0,0,0,1.23392991243988,0.300343057843917,0.571652865261156,0.112131084345361,0,0.07333828582095,0.258543431515556,0,2.535908257668,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0,0,0,2.60588947434988,0,0.791951872933429,0.904318131178758,0.871533458600294,0.399891964728228,0,0,0,0.239624855491583,2.29723871668228,2.85273810081437,0.723906533337896,2.26023954805422,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,2.50085260529839,0.271265023699736,0.623912584592421,1.07057393278297,1.10391690523754,0.468565659970853,0.902838299183157,2.27407504055985,2.0694614258501,0.664225598535437,0.184369168541703,1.30325421702124,0,0,0,0,0,0,0,0.30239029332968,0.496215615637554,0.61384789315225,0.280660094433074,0.512556597022804,0,0.482561763430822,1.48418066444991,2.15893571323718,0.532685175939381,2.13530605635904,0.519254429183621,1.39452454151951,0.483437798366489,0.200506470303285,0.184161977871793,0,0.728364672026868,0.393373244878272,0,0.308061348417659,0,0,0.316654886678627,0,0.510281115829547,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0.082509499920588,0.574265537996172,0,0,0.386682873168488,1.23238893691716,1.84204409671355,1.24052915236078,0.751941714077915,1.30515024522806,1.70453254832202,0,0.165284915360978,0,0.638063562472921,0.10115778085555,0.929691098594572,1.25924938732256,2.0911118104818,0.308033580176089,1.06461206063404,0.869932992075073,0.18532421910392,0.715624433709956,0.372158369359667,1.58189712359363,1.33441135746677,0,0.855877976067841,0,0,0.359744915166629,0.823611089208164,0.942499218765491,0.202182481573316,0,0,0,3.89941583410055,0,0,0.141405431953713,1.13008116620243,0.551365343546124,0.66343897524122,0.876901770507525,0.578775534266688,1.9676842561399,0.202910376962704,0.30982349809975,0.563391205064483,0.143411352204052,0,0.35667105148125,1.77380532035299,1.89996871767898,0.329294892959902,0.75894634753143,0.349934720244983,0.673554789078584,0,0,0.188287601553558,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0.185803175125719,0,0.426851060090485,0.159426272728822,0,0,0,0.324621940274555,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0.333698283423817,0.19538809540204,0,0,0,0,0,2.05854594449042,0.879049075631364,10.0729233052096,0.111443384277478,1.13654458722565,0,0,0,0.994147647766298,0.422008249231538,0.445234820091624,0,0,0.796991953004279,0.552567831062295,0,0,0.369254416383208,0,1.52776196950456,0,0,0.690503839458535,0,0,0,0.278304294485554,0,0,0,1.44999915086959,3.98277068999249,0.254253650292766,0,0,1.45802306691627,0.173624994933292,0,0.60298219312704,0,0.331737779793674,0,0.438770794307945,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| |||
|short_description=p3@STEAP1 | |||
}} |
Revision as of 02:20, 14 September 2013
Short description: | p3@STEAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_STEAP1_5end |
Coexpression cluster: | C4704_mesenchymal_Cardiac_Smooth_Hepatocyte_myxofibrosarcoma_bronchial_gastric |
Association with transcript: | -31bp_to_ENST00000475789_5end |
EntrezGene: | STEAP1 |
HGNC: | 11378 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of periodontium | 2.52e-08 | 6 |
fibroblast | 2.41e-07 | 76 |
fibroblast of dermis | 5.38e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
periodontium | 2.52e-08 | 6 |
dentition | 2.52e-08 | 6 |
somite | 2.55e-07 | 71 |
presomitic mesoderm | 2.55e-07 | 71 |
presumptive segmental plate | 2.55e-07 | 71 |
dermomyotome | 2.55e-07 | 71 |
trunk paraxial mesoderm | 2.55e-07 | 71 |
paraxial mesoderm | 3.99e-07 | 72 |
presumptive paraxial mesoderm | 3.99e-07 | 72 |
skull | 5.35e-07 | 7 |
dense mesenchyme tissue | 6.17e-07 | 73 |
surface structure | 8.25e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.15e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.